BAC Information

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BAC

Clone NameB6Ng01-144J02
Chromosome2 (Build37)
Map Location 107,688,226 - 107,689,034
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC677260, 2700007P21Rik, LOC383739, Fshb, Kcna4
Downstream geneLOC100043078, LOC668790, LOC623003
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144J02.bB6Ng01-144J02.g
ACCDH942212DH942213
length1,1811,041
definitionDH942212|Mus musculus domesticus DNA, BAC clone: B6Ng01-144J02, 5' end.DH942213|Mus musculus domesticus DNA, BAC clone: B6Ng01-144J02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttccttttttttctaga
gcttttagatgtgttgtcaagctgctagtatgtgctctctcccgtttttt
cttgaaggcactcatagctatgagtttccctcttagaaatgctttcattg
tgttccaaaggttgggtacggtgtggcttcattcattaacctctaaaagg
tcttaattcatcttaatcgtctgaacaagtatcatgaaaagaagtttgtc
agttccatgtgaatgtgggctttgttttatttgtatgaagatcgccctag
tatgtggattcggtaaggaaccttggaccac
gaattcacatgaaccggaggagcataaacaaggcctacaaagttctgtat
tagatcctcagtatatatattatagctttcagtttagtgcttttttgaga
ttcctaaatatatgaacaagtaggtttctaatttatgatgatgatgatga
tgtttgtatatattccaaatgttaccttccttcctggtcacccctccatg
agttctttatcctgttccccctttccttcgaatctgagacagtgctcccc
cccacccatccactcctacctcaccccactagcatcactgtttcctgagc
catcaaatttctacaagactaaaagtataatttcccactgagtcctgaaa
aggaattcctctgctacatatgtagcaggggggcacagaccaacccatgt
atacaatttggttggtgacttagcctctgggagctctgaggggtacaggt
tagttgatactctttcagtccttccactaactttcccaatctttggctgt
gaatatctgcatctctctcagtcaggtactggtagagcctctcagaggac
agccatgctagggtcctgtctgtaagcacaacatggcatctgtaagtgtt
ggggtttggtcctgcacatgggatggatcccaaattgggccagtctatgg
ctggcctttccttctgtttctgctacatttttgtccctgtatttctttta
gacaggaatgattctgggctaagaattcttaaataatcacatgtggctca
ttacattttctgttgccttggtttatccaaattacatgggactgctttat
tttcttatgttttgtttcactatgttttgctatcacctagaagcctattc
ctttgataatgaaagatggaaatggagggaatccagatgagagcagaggt
ggacagatctgagaggaatagagggaggggaagtgcattcatattatact
gatcagaaaagaatccatgtttattaaaagtgggaaatgttataaaaggc
cactaatttaggatgttggagggactaaagaagggactaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_107688226_107689034
seq2: B6Ng01-144J02.g_302_1106

seq1  AGACAGTGCTCCCCCCCACCCATCCACTCCTACCTCACCCCACTAGCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTGCTCCCCCCCACCCATCCACTCCTACCTCACCCCACTAGCATC  50

seq1  ACTGTTTCCTGAGCCATCAAATTTCTACAAGACTAAAAGTATAATTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTCCTGAGCCATCAAATTTCTACAAGACTAAAAGTATAATTTCCC  100

seq1  ACTGAGTCCTGAAAAGGAATTCCTCTGCTACATATGTAGCAGGGGGGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTCCTGAAAAGGAATTCCTCTGCTACATATGTAGCAGGGGGGCAC  150

seq1  AGACCAACCCATGTATACAATTTGGTTGGTGACTTAGCCTCTGGGAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAACCCATGTATACAATTTGGTTGGTGACTTAGCCTCTGGGAGCTC  200

seq1  TGAGGGGTACAGGTTAGTTGATACTCTTTCAGTCCTTCCACTAACTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGTACAGGTTAGTTGATACTCTTTCAGTCCTTCCACTAACTTTCC  250

seq1  CAATCTTTGGCTGTGAATATCTGCATCTCTCTCAGTCAGGTACTGGTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTTGGCTGTGAATATCTGCATCTCTCTCAGTCAGGTACTGGTAGA  300

seq1  GCCTCTCAGAGGACAGCCATGCTAGGGTCCTGTCTGTAAGCACAACATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCAGAGGACAGCCATGCTAGGGTCCTGTCTGTAAGCACAACATGG  350

seq1  CATCTGTAAGTGTTGGGGTTTGGTCCTGCACATGGGATGGATCCCAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTAAGTGTTGGGGTTTGGTCCTGCACATGGGATGGATCCCAAATT  400

seq1  GGGCCAGTCTATGGCTGGCCTTTCCTTCTGTTTCTGCTACATTTTTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGTCTATGGCTGGCCTTTCCTTCTGTTTCTGCTACATTTTTGTCC  450

seq1  CTGTATTTCTTTTAGACAGGAATGATTCTGGGCTAAGAATTCTTAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTCTTTTAGACAGGAATGATTCTGGGCTAAGAATTCTTAAATAA  500

seq1  TCACATGTGGCTCATTACATTTTCTGTTGCCTTGGTTTATCCAAATTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGTGGCTCATTACATTTTCTGTTGCCTTGGTTTATCCAAATTACA  550

seq1  TGGGACTGCTTTATTTTCTTATGTTTTGTTTCACTATGTTTTGCTATCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTGCTTTATTTTCTTATGTTTTGTTTCACTATGTTTTGCTATCAC  600

seq1  CTAGAAGCCTATTCC-TTGATAATGAAAGATGGAAATGGAGGGAATCCAG  649
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTAGAAGCCTATTCCTTTGATAATGAAAGATGGAAATGGAGGGAATCCAG  650

seq1  ATGAGAGCAGAGGTGGACAGAACTGAGAGGAATAGAGGGAGGGGAAGTGC  699
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGAGAGCAGAGGTGGACAGATCTGAGAGGAATAGAGGGAGGGGAAGTGC  700

seq1  ATTCATATTATACTGATCAGAAAAGAATCCATGTTTAATAAAAGTGGGGA  749
      ||||||||||||||||||||||||||||||||||||| ||||||||||  
seq2  ATTCATATTATACTGATCAGAAAAGAATCCATGTTTATTAAAAGTGGG--  748

seq1  AAATGTTATAAAAAAGCCACTAATTTAAGATGTTGGAGGGACAAAAAGAA  799
      ||||||||| |||| |||||||||||| ||||||||||||||  ||||||
seq2  AAATGTTAT-AAAAGGCCACTAATTTAGGATGTTGGAGGGAC-TAAAGAA  796

seq1  GGGGACTAAT  809
       |||||||||
seq2  -GGGACTAAT  805