BAC Information

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BAC

Clone NameB6Ng01-144P24
Chromosome2 (Build37)
Map Location 140,133,566 - 140,259,355
singlet/doubletdoublet
Overlap geneSel1l2, 2900006F19Rik
Upstream geneLOC628103, C130053K05Rik, LOC100043792, 5430433G21Rik, Tasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik
Downstream geneFlrt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144P24.bB6Ng01-144P24.g
ACCDH942528DH942529
length1,1051,136
definitionDH942528|Mus musculus domesticus DNA, BAC clone: B6Ng01-144P24, 5' end.DH942529|Mus musculus domesticus DNA, BAC clone: B6Ng01-144P24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(140,133,566 - 140,134,236)(140,258,225 - 140,259,355)
sequence
gaattctatgtcttcatctgaaggccaccaggaagagattgggctccaca
cagctattaaagcccatgcccacagtgacacacctaatacaacaaagcca
tgcttatttcaacaaggccatgcttccaaatagttccacttcctgggcca
agcatttacaaaccatcacaccacttaatgtgttcaattcattttttaaa
aaaatattcaccaaacatgtgcaacagtcagttttagaacattttatcac
ctcaagaagaaaccacaaattctttagctgtcacccatcttattttcaaa
tctttcctgttagtcctcactactaatctgtgttctgtccctgtagtttt
cacattttgattcttcatatgcacattgtcatataatgacatgtttcctt
tcttgtgtgactagctgtttccttgtaggatgattcttttcaaaactaat
cttcattgtagcttataccagaattttattccttttatggtcaaataata
aactatatatggatatatcaatttttctattgctgtgatagaaaatactt
ggacttgagggagaaaggaaggggatgtttattttggcttatgctccagg
gtgtagctcatcatggtagaaaagttatggtgtctaaatcttgaggagac
agctgcttacacattgcatccccagtcaggagacataaatgcttggtctt
agttcatttttttctttttttgttcagtctggagacccagcctacaggat
ggtgctgcccatgctcagtgtccttttagtagttattttagtagttattt
ttctattgctgtgataaaacactgtgaccaagtcaacttactgaaaggaa
ggatttatttgggcttactcttccagagaaataaagatctgtcacagtgg
ggcacttgtcagccagcagcaggcatgtgtctggagcaagtcagagcata
tgtgggattattctcattctaatgtcactggctctgcacctcaactctaa
ttgatctcatcagaatatcctacagcttgttgggaagctatcacatcccc
tcacgaatgtgccaggctttgtctacctgggtgattgtagatctaaggaa
gtggt
gaattctaccccttggtaccaacccaaatgaaacctgaccctaggttctc
ttccaattcccatcagtgtgtattaccaaattccaagttgttaaatgcca
gcacttgagaagtcattctcttactttcctacctacactgtcatctcctc
actttattgaattatccattttattttcttcatagcacttaacatagtct
gaaatactttgtccttccgattccctgttctagggaaaatgtaaaggata
tgaaaacaaaaacattacctctattgttcataactatatttcaaatattt
cacatattggcaatttagttattaaataggcaagctactgacgctggtct
atgtaaattccaacagttatggaggttacacaggatgaaaatgagtcaaa
ggtcagaagagtgagattgccatctcagaataaaaatcaaatacttgcct
tgcatgtgtgaccctttatattcaatccctagcacaacaaaagaaaagaa
aattcagtgaacattaaataaacatttgtttaatagatgggagtttttga
agctgggactctcagtggtaaagtacttcaaacttaaaaacctgagttca
gagcctcagtgtctatatagaaagttgaatatggcaggtagtccctgaaa
acataacagtgggagatgaagacaggaggaatcttgaagctcactagcca
gttagctgtgccaaatctgtatgttccatgttcagtgagagaccacacct
caagtacataagatgatttaggaagacttctggcctccacataaacatgc
atagaagtgtaaacacacaagaaaaatacacccccacaagataaggtaat
tatcttaccaggacactggctaacctcaagcctggactgctcttcattca
gcttttctagtcttcacctttccaattcttttctactctaattcctccaa
ccttccacagtataaacaggtgcagcttcaatcttctgaccacctaagac
atcctcaattccaactgctacctggccattcttctacacttcatctgatt
atctgaatttatttcttcccaataatcttccaaataaaaatgtatttaag
tcatttattagccaccttgccccaaacaaaggcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_140133566_140134236
seq2: B6Ng01-144P24.b_487_1151

seq1  CAAAACTAATCTTCATTGTAGCTTATACCAGAATTTTATTCCTTTTATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTAATCTTCATTGTAGCTTATACCAGAATTTTATTCCTTTTATGG  50

seq1  TCAAATAATAAACTATATATGGATATATCAATTTTTCTATTGCTGTGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAATAAACTATATATGGATATATCAATTTTTCTATTGCTGTGATA  100

seq1  GAAAATACTTGGACTTGAGGGAGAAAGGAAGGGGATGTTTATTTTGGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATACTTGGACTTGAGGGAGAAAGGAAGGGGATGTTTATTTTGGCTT  150

seq1  ATGCTCCAGGGTGTAGCTCATCATGGTAGAAAAGTTATGGTGTCTAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCAGGGTGTAGCTCATCATGGTAGAAAAGTTATGGTGTCTAAATC  200

seq1  TTGAGGAGACAGCTGCTTACACATTGCATCCCCAGTCAGGAGACATAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAGACAGCTGCTTACACATTGCATCCCCAGTCAGGAGACATAAAT  250

seq1  GCTTGGTCTTAGTTCATTTTTTTCTTTTTTTGTTCAGTCTGGAGACCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTCTTAGTTCATTTTTTTCTTTTTTTGTTCAGTCTGGAGACCCAG  300

seq1  CCTACAGGATGGTGCTGCCCATGCTCAGTGTCCTTTTAGTAGTTATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGGATGGTGCTGCCCATGCTCAGTGTCCTTTTAGTAGTTATTTTA  350

seq1  GTAGTTATTTTTCTATTGCTGTGATAAAACACTGTGACCAAGTCAACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTATTTTTCTATTGCTGTGATAAAACACTGTGACCAAGTCAACTTA  400

seq1  CTG-AAGGAAGGATTTATTTGGGCTTACTCTTCCAGAGAAATAAAGATCT  449
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGGAAGGATTTATTTGGGCTTACTCTTCCAGAGAAATAAAGATCT  450

seq1  GTCACAGTGGGGCACTTGTCAGCCAGCAGCAGGCATGGTGTCTGGAGCAA  499
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTCACAGTGGGGCACTTGTCAGCCAGCAGCAGGCAT-GTGTCTGGAGCAA  499

seq1  GTCAGAGCATATGTGGGA-TATTCTCATTCTAATTGTCACTGGCTCTGCC  548
      |||||||||||||||||| |||||||||||||| |||||||||||||| |
seq2  GTCAGAGCATATGTGGGATTATTCTCATTCTAA-TGTCACTGGCTCTG-C  547

seq1  ACCTCAACTCTATTTGATCTCATCAAGAAATATTCCTACAGCCTGTTGGG  598
      |||||||||||| ||||||||||||   |||| ||||||||| |||||||
seq2  ACCTCAACTCTAATTGATCTCATCA--GAATA-TCCTACAGCTTGTTGGG  594

seq1  AAGCTAATCACA-CCCCTCACAGATGTGCCCAGGGGCTTGTCTA-CTGGG  646
      ||||| |||||| ||||||||  |||||||   ||  ||||||| |||||
seq2  AAGCT-ATCACATCCCCTCACGAATGTGCC--AGGCTTTGTCTACCTGGG  641

seq1  TGATTGTAGATCCTATGAAAGTGGT  671
      ||||||||||| ||| | |||||||
seq2  TGATTGTAGAT-CTAAGGAAGTGGT  665

seq1: chr2_140258225_140259355
seq2: B6Ng01-144P24.g_66_1201 (reverse)

seq1  CAAG-CTTTGTTTGGGGGCAGGTGGCTAATAAATGACT--AATACATTTT  47
      |||| ||||||||||||  |||||||||||||||||||  ||||||||||
seq2  CAAGCCTTTGTTTGGGGCAAGGTGGCTAATAAATGACTTAAATACATTTT  50

seq1  TGTATTTTGAAAGATAATTGGGAAAGAATAAA-TCAGATAATCAGATGAA  96
      |    |||| ||||| ||||||||  |||||| |||||||||||||||||
seq2  T---ATTTGGAAGATTATTGGGAAGAAATAAATTCAGATAATCAGATGAA  97

seq1  GTTGTAG-AGAATGG-CAGGTAGCAGTTGGAATTGAGGATGTCTTAGGTT  144
      | ||||| ||||||| |||||||||||||||||||||||||||||||| |
seq2  G-TGTAGAAGAATGGCCAGGTAGCAGTTGGAATTGAGGATGTCTTAGG-T  145

seq1  GGTCAG-AGATTGAAGCTGCA-CTGTTTATACTGT-GAAGGTTGGA-GAA  190
      |||||| |||||||||||||| ||||||||||||| |||||||||| |||
seq2  GGTCAGAAGATTGAAGCTGCACCTGTTTATACTGTGGAAGGTTGGAGGAA  195

seq1  TTAGAGTAGAAAAGAATTGGAAAGGTGAAGACTAGAAAAGCTGAATGAAG  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTAGAAAAGAATTGGAAAGGTGAAGACTAGAAAAGCTGAATGAAG  245

seq1  AGCAGTCCAGGCTTGAGGTTAGCCAGTGTCCTGGTAAGATAATTACTTTA  290
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGCAGTCCAGGCTTGAGGTTAGCCAGTGTCCTGGTAAGATAATTACCTTA  295

seq1  TCTTGTGGGGGTGTATTTTTCTTGTGTGTTTACACTTCTATGCATGTTTA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGGGGGTGTATTTTTCTTGTGTGTTTACACTTCTATGCATGTTTA  345

seq1  TGTGGAGGCCAGAAGTCTTCCTAAATCATCTTATGTACTTGAGGTGTGGT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGGCCAGAAGTCTTCCTAAATCATCTTATGTACTTGAGGTGTGGT  395

seq1  CTCTCACTGAACATGGAACATACAGATTTGGCACAGCTAACTGGCTAGTG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACTGAACATGGAACATACAGATTTGGCACAGCTAACTGGCTAGTG  445

seq1  AGCTTCAAGATTCCTCCTGTCTTCATCTCCCACTGTTATGTTTTCAGGGA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAAGATTCCTCCTGTCTTCATCTCCCACTGTTATGTTTTCAGGGA  495

seq1  CTACCTGCCATATTCAACTTTCTATATAGACACTGAGGCTCTGAACTCAG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGCCATATTCAACTTTCTATATAGACACTGAGGCTCTGAACTCAG  545

seq1  GTTTTTAAGTTTGAAGTACTTTACCACTGAGAGTCCCAGCTTCAAAAACT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAAGTTTGAAGTACTTTACCACTGAGAGTCCCAGCTTCAAAAACT  595

seq1  CCCATCTATTAAACAAATGTTTATTTAATGTTCACTGAATTTTCTTTTCT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTATTAAACAAATGTTTATTTAATGTTCACTGAATTTTCTTTTCT  645

seq1  TTTGTTGTGCTAGGGATTGAATATAAAGGGTCACACATGCAAGGCAAGTA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTGCTAGGGATTGAATATAAAGGGTCACACATGCAAGGCAAGTA  695

seq1  TTTGATTTTTATTCTGAGATGGCAATCTCACTCTTCTGACCTTTGACTCA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTTTATTCTGAGATGGCAATCTCACTCTTCTGACCTTTGACTCA  745

seq1  TTTTCATCCTGTGTAACCTCCATAACTGTTGGAATTTACATAGACCAGCG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATCCTGTGTAACCTCCATAACTGTTGGAATTTACATAGACCAGCG  795

seq1  TCAGTAGCTTGCCTATTTAATAACTAAATTGCCAATATGTGAAATATTTG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAGCTTGCCTATTTAATAACTAAATTGCCAATATGTGAAATATTTG  845

seq1  AAATATAGTTATGAACAATAGAGGTAATGTTTTTGTTTTCATATCCTTTA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAGTTATGAACAATAGAGGTAATGTTTTTGTTTTCATATCCTTTA  895

seq1  CATTTTCCCTAGAACAGGGAATCGGAAGGACAAAGTATTTCAGACTATGT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCCCTAGAACAGGGAATCGGAAGGACAAAGTATTTCAGACTATGT  945

seq1  TAAGTGCTATGAAGAAAATAAAATGGATAATTCAATAAAGTGAGGAGATG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCTATGAAGAAAATAAAATGGATAATTCAATAAAGTGAGGAGATG  995

seq1  ACAGTGTAGGTAGGAAAGTAAGAGAATGACTTCTCAAGTGCTGGCATTTA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTAGGTAGGAAAGTAAGAGAATGACTTCTCAAGTGCTGGCATTTA  1045

seq1  ACAACTTGGAATTTGGTAATACACACTGATGGGAATTGGAAGAGAACCTA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTGGAATTTGGTAATACACACTGATGGGAATTGGAAGAGAACCTA  1095

seq1  GGGTCAGGTTTCATTTGGGTTGGTACCAAGGGGTAGAATTC  1131
      |||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAGGTTTCATTTGGGTTGGTACCAAGGGGTAGAATTC  1136