BAC Information

Click to search

BAC

Clone NameB6Ng01-145J03
Chromosome2 (Build37)
Map Location 142,776,189 - 142,776,704
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145J03.bB6Ng01-145J03.g
ACCDH942941DH942942
length1,213945
definitionDH942941|Mus musculus domesticus DNA, BAC clone: B6Ng01-145J03, 5' end.DH942942|Mus musculus domesticus DNA, BAC clone: B6Ng01-145J03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagttttatgtgtgataccaaattctttaaaaaatgaagtaaat
tttttgctagaataggatagcccgttatctgtcttaataagtttagggaa
tcccatggcaataaaggcttgtaggcaatgatcaattacattttttgagg
attcaccaggatgcagagaagcaaaaagaaatcctgaacaagtatcaata
caaacatgtatatattttaattttccaaaatctgcataatgagttacatc
catttgccaaatatgattagtcataagacctcgtggattaactcctaaat
atggcactggagataatgtaatacaattagtacattctttttaaatcatt
tttgcctgctccttagtgatcttaagttggagccttaaggtctggctaga
gagatgaaatttttcatgatcacgtttggccaaatcaacaggatctgaaa
ttaaggcttcgcctattagagctctgtggatgcaatcattgcctttagct
aaaggtccagaaagaccagaatgagttcgtatgtggccaatatacaatgg
gtgttttcactcaagaatgatgttttgtaattgtgaaaacagggatcctg
ctggcatattaaagtatgatgtattaaagttaaacataccacaggtctcc
aataagggtactgattgtgcaacatataaactatcagtaaaaatattaaa
agcctccagattatgagacctctggtggaatcaccatgcctaacctatag
ctgtactacagagcaattgtcataaaaaactgtaatgtactggtatagcg
acagacaagtagaccaatggaatagaattgaagatccagaaatgaaccca
cacacctatggtcacttgatcttcgacaagggagctaaagccatccagtg
gaaaaagacagcattttcaacaaatggtgctggcacaactggttgttatc
atgtagaagatgcgaatcgacccaatcctctctcttgtactaaggacaat
ctaagttgatcagactccacatcaaaccagaaaaagtgaacttatagagg
agagtgggggaaattcttgagatatgcacagggaaaaattcctgattgac
agcatgccttgtggttagattgagattgcaatgaacctcatgatgccagc
ctcgcaagcaagacctgctatagaaaagacctcaagattgggaagattgc
atcctatcagtat
gaattctattccattggtctacatgtctgttgctatgccagtaccataga
gtttttaatcacaattcctctgtagtacagctttaggttcggcacggtga
ttccaccagaagttcttttatccttgagcagagtttttgctatcctaggt
tttttgttattccagatgaatttgcaaattgctctttctaattcgttgaa
gaattgagttggaattttgatggggattgcattgaatctgtagattgctt
ttggcaagatagccatttttacaatgtttatcctgccaatccatgagcat
gggagatctttccatcttctgatatcatctttaatttcttttcttcagag
actttgaagttcttatcatacagatctttcacttccttagttagagtcac
gccaaggaattttatattatttgtgattattaagaagtgtgttatttccc
taatttctttctcagcctgtttaccctttgtgtagagaaaggccattgac
ttgtttgagttaatttaatatccagctacttcatagaagctgtttatcag
gtttaggtgttctctggttgaaattttagggtccgttttatatactatca
tatcatctgcaaaaagtaatattttgacttttaccttttcattttgtatc
cccttgatctccttttgttgtcgaattgctctggctaggacttcaagtaa
aatgttgaataggtagggagaaagtgggcatccttgtctagtccctgatt
ttagtgggattgcttccatcttctcaccatttacgttgatgttggctact
ggtttgctgtagattgcttttagcatgtttaagtatgggccttgaattcc
tgatctttcaagacttttatcatgaatgtgtgttggattttttcaaatgc
tttctctgcgtctgagatgatcatgtggttttgttttgagttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776189_142776704
seq2: B6Ng01-145J03.g_67_585 (reverse)

seq1  TATAAAATAAACTCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAA  50
      ||| |||| ||||||||||||||||||||||||||||| ||||||  |||
seq2  TATTAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAGGGTAA  50

seq1  ACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAA  100
      |||||||||||||||||||||||||| ||||| ||||| |||| ||||||
seq2  ACAGGCTGAGAAAGAAATTAGGGAAATAACACACTTCTTAATAATCACAA  100

seq1  ATAATATAAAATATCTCGGCGTGACTCTAACTAAGGAAGTGAAAGATCTG  150
      ||||||||||||  || |||||||||||||||||||||||||||||||||
seq2  ATAATATAAAATTCCTTGGCGTGACTCTAACTAAGGAAGTGAAAGATCTG  150

seq1  TATGATAAAAACTTC-AAGTCTCTGAAG-AAAGAAATTAAAGAAGATCTC  198
      |||||||| |||||| |||||||||||| |||||||||||||| ||| ||
seq2  TATGATAAGAACTTCAAAGTCTCTGAAGAAAAGAAATTAAAGATGATATC  200

seq1  AGAAGATGGAAGGATCTCCCATGCTCATGGATTGGCAGGATCAACATTGT  248
      ||||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  AGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATAAACATTGT  250

seq1  AAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCA  300

seq1  TCAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAA  348
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCAAAATTCCAACTCAATTCTTCAACGAATTAGAAAGAGCAATTTGCAAA  350

seq1  TTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGA  398
      ||||||||||||||||||||||||||||||||||||| ||| ||||||||
seq2  TTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTGCTCAAGGA  400

seq1  TAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTACA  448
      ||||||||| ||||||||||||||| ||||  |||||||||| |||||||
seq2  TAAAAGAACTTCTGGTGGAATCACCGTGCCGAACCTAAAGCTGTACTACA  450

seq1  GAGCAATTGTGA-TAAAAACTGCATGGTACTGGTATAGAGACAGACAAGT  497
      ||| |||||||| ||||||||  |||||||||| ||||  ||||||| ||
seq2  GAGGAATTGTGATTAAAAACTCTATGGTACTGGCATAGCAACAGACATGT  500

seq1  AGACCAATGGAATAGAATT  516
      |||||||||||||||||||
seq2  AGACCAATGGAATAGAATT  519