BAC Information

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BAC

Clone NameB6Ng01-145J08
Chromosome2 (Build37)
Map Location 159,191,427 - 159,192,348
singlet/doubletsinglet
Overlap genenone
Upstream geneA930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1, Actr5, Ppp1r16b, 2310007D09Rik, Dhx35, LOC100043891
Downstream geneLOC100043689, Gm826, Mafb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145J08.bB6Ng01-145J08.g
ACCDH942951DH942952
length9221,228
definitionDH942951|Mus musculus domesticus DNA, BAC clone: B6Ng01-145J08, 5' end.DH942952|Mus musculus domesticus DNA, BAC clone: B6Ng01-145J08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacattgaaaccagccttctctattatacaaccttcattttgag
aaccctgaagctgacataaaggcaggaagcagaaggctaattgggcagaa
gactaacttaccaagcccatctccattcaccctgaggcagggttatcatc
tggtcactggtttgtttcaacatctgtaaaaagaggttgataacatctcg
cctgtcttgttctcgctctatgagagaaccagaagacaaagcgaggagga
aatctcatgataagctataaatgtgcatcttagaggatccaggccagaac
cacatctctatctcagaagttctaataaatctcagtgaggaatcagaagg
gtcagtcgataatggaagttagctaaatgagcatgacccagcccacaccc
agggcaggaggaattcccgacaagtagtcttccgagaagtgtttgacctc
actcaaaggcaccagagaagaaatacttctgagctctgggggaggggtac
tgaccccagactctcaagctggccaacagaagtcaaggtcatacacagtt
tgaacttgaagtctgagatagtctacactatggaggaaaatggcttggaa
ttctcacttctactttcaatgagctgaggtaggcctctaaattatcacaa
tgattaatacttccatgaaaggcctcaaatcatctatgttgccttgttct
atttatgttaaacatccaatctgaactcaaatagcaagggtgttctatag
ttcaagaccattgttccatctgcaacacaaactctctcttctcttctctt
ctcttctcttctcttctcttctctctcttctcttttttctctctcacata
ccacacgctcacaccacacttccccacacacagagacagggagagagagt
gtgtgtgaaacttagagagaga
gaattcaatagcagtaaaaacactaaagaaaatgtacttaaatgaagaag
gacatgaaaaattaaataaatctaaaagaaaacctcaccattataatgaa
atatagtataaatgcttgaagatattgtagacagattggatcactcataa
aatgatttttaaaaaactcacagacttgtcactttcatgtgcaagaaata
taagccaccatgagaagaatcaaatcaacaaattatggtcaaagaaggag
aattataatcaaagatacatcaaattctttccataaaaatcaaagaaata
cccaaagtctaaaggaaaagcttctatccaagaacaataggcatagaaaa
caccaaagagacaaggcctacaaagaaattcctcatggtatattttaaaa
acctgaatcacatactaaagaaaaaatataaaactgtagaagagaagttt
caggtcacatataaagcatttcaattagataaacagctgattattctgtg
gaaacttgcaaagcttccatatacccaaagcagatgtattcacaactgtt
aacccagactattatacccagtaaaactatctatttaacttgaaagagaa
ataaaatttttgcataatataaacagactaaaggaatatctgactgctaa
gccaaatctacagaagatactggaagaactttggactgaagagaaggaaa
ctcaagagctcatagcgaaataatataatacacttaaccaaaataatcta
aaaaaagaaagtcagaaaatcaacaaactgacaggcattagtacccatat
ttcaataataaatatgaatgttaattatcttaatgttttaagtaaaagac
aattattatattaattagaaaaaagatttgtcttattctatctcaaagaa
catagaccatcctcaagatatgtaacaactcagggacagcacatgggaca
gaaacgatggaaagaggacaaatgagaagcatggaaaacgaaaaaaagat
aagatatccagttgtgataaatagactctaagccaggctagtagagggag
attaagaaagtggcttcatattctttatgagaacaatcatcagagggaac
tacattaacattaaccattggaacgaggctatcaattcctaaggcttgga
ttattccaacagtatggaattcgtatccatctcattacgaggtatcgaca
aaacctaccgaaagaggttgcgaggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_159191427_159192348
seq2: B6Ng01-145J08.b_44_965 (reverse)

seq1  TCTCTCTCT--GTTTCACACACACTCTCTCTCCCTGTCTCTGTGTGTGTG  48
      |||||||||  ||||||||||||||||||||||||||||||||||||| |
seq2  TCTCTCTCTAAGTTTCACACACACTCTCTCTCCCTGTCTCTGTGTGTGGG  50

seq1  TATGTGTGTGTGTGAGTGTGTGTGTATGTGAGAGAG-AGAGAGAGAAGAG  97
       | ||||| ||||||| ||||| ||||||||||||| | | |||||||||
seq2  GAAGTGTG-GTGTGAGCGTGTG-GTATGTGAGAGAGAAAAAAGAGAAGAG  98

seq1  AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAGAGTTTGTG  147
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAGAGTTTGTG  147

seq1  TTGCAGATGGAACAATGGTCTTGAACTATAGAACACCCTTGCTATTTGAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGATGGAACAATGGTCTTGAACTATAGAACACCCTTGCTATTTGAG  197

seq1  TTCAGATTGGATGTTTAACATAAATAGAACAAGGCAACATAGATGATTTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTGGATGTTTAACATAAATAGAACAAGGCAACATAGATGATTTG  247

seq1  AGGCCTTTCATGGAAGTATTAATCATTGTGATAATTTAGAGGCCTACCTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTTCATGGAAGTATTAATCATTGTGATAATTTAGAGGCCTACCTC  297

seq1  AGCTCATTGAAAGTAGAAGTGAGAATTCCAAGCCATTTTCCTCCATAGTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATTGAAAGTAGAAGTGAGAATTCCAAGCCATTTTCCTCCATAGTG  347

seq1  TAGACTATCTCAGACTTCAAGTTCAAACTGTGTATGACCTTGACTTCTGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTATCTCAGACTTCAAGTTCAAACTGTGTATGACCTTGACTTCTGT  397

seq1  TGGCCAGCTTGAGAGTCTGGGGTCAGTACCCCTCCCCCAGAGCTCAGAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGCTTGAGAGTCTGGGGTCAGTACCCCTCCCCCAGAGCTCAGAAG  447

seq1  TATTTCTTCTCTGGTGCCTTTGAGTGAGGTCAAACACTTCTCGGAAGACT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTCTCTGGTGCCTTTGAGTGAGGTCAAACACTTCTCGGAAGACT  497

seq1  ACTTGTCGGGAATTCCTCCTGCCCTGGGTGTGGGCTGGGTCATGCTCATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTCGGGAATTCCTCCTGCCCTGGGTGTGGGCTGGGTCATGCTCATT  547

seq1  TAGCTAACTTCCATTATCGACTGACCCTTCTGATTCCTCACTGAGATTTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAACTTCCATTATCGACTGACCCTTCTGATTCCTCACTGAGATTTA  597

seq1  TTAGAACTTCTGAGATAGAGATGTGGTTCTGGCCTGGATCCTCTAAGATG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACTTCTGAGATAGAGATGTGGTTCTGGCCTGGATCCTCTAAGATG  647

seq1  CACATTTATAGCTTATCATGAGATTTCCTCCTCGCTTTGTCTTCTGGTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTATAGCTTATCATGAGATTTCCTCCTCGCTTTGTCTTCTGGTTC  697

seq1  TCTCATAGAGCGAGAACAAGACAGGCGAGATGTTATCAACCTCTTTTTAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAGAGCGAGAACAAGACAGGCGAGATGTTATCAACCTCTTTTTAC  747

seq1  AGATGTTGAAACAAACCAGTGACCAGATGATAACCCTGCCTCAGGGTGAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTGAAACAAACCAGTGACCAGATGATAACCCTGCCTCAGGGTGAA  797

seq1  TGGAGATGGGCTTGGTAAGTTAGTCTTCTGCCCAATTAGCCTTCTGCTTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATGGGCTTGGTAAGTTAGTCTTCTGCCCAATTAGCCTTCTGCTTC  847

seq1  CTGCCTTTATGTCAGCTTCAGGGTTCTCAAAATGAAGGTTGTATAATAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTATGTCAGCTTCAGGGTTCTCAAAATGAAGGTTGTATAATAGA  897

seq1  GAAGGCTGGTTTCAATGTAGAATTC  922
      |||||||||||||||||||||||||
seq2  GAAGGCTGGTTTCAATGTAGAATTC  922