BAC Information

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BAC

Clone NameB6Ng01-145P19
Chromosome2 (Build37)
Map Location 112,793,641 - 112,794,619
singlet/doubletsinglet
Overlap geneRyr3
Upstream geneOlfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven
Downstream gene4930563P21Rik, Fmn1, Grem1, LOC100043520, Scg5, Arhgap11a, LOC100043526
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145P19.b
ACCDH943247
length977
definitionDH943247|Mus musculus domesticus DNA, BAC clone: B6Ng01-145P19, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccccgtattgaacatattgtcctcctcaggcttttgacatgtatg
gtggtatccccttctttcgtacgatacttactcggtggccatgtagttcg
tcttttcccggtcatgatgaatgtttgacgataccatctacagatcccaa
tgattctcctcacggtaagccactatcctcatccttctctctgagctgtc
tctctggtagctcctattaaagagtttgcatttctatttggccacacatg
atttgtggaggtctttcttacttggactgaccttcatctagccacaagct
ccagtttgctcaaaaaacgtgtgtttacgttaaatctaagcaaacaatgc
cacaatgcatcgcaagccattcattgtcttgatcgctcctgagtctgaat
cattcaccttggggagagaaatcagcaattctctcaccgctgcacagcaa
tagagaagctgtgcattcacgtaagttatggctggtccttgaaaggcagc
ttatctctatttatcccctttagtggaccaagtaattaagatggaattgt
tggtttcatttttcttgataccaactcatgtatgagaaatcaagcatcaa
aatccaacagaagatggacttagcaggaagctgttccaagaactatagtt
cgaggtagagtagaggtgaactatatctttagtccaaaggtgattgctta
atgggctcttattgaagatttaaaattatgtaaaacagccctattgtata
tagaagacactgtttccttgaagttatccatcatctctggctcttatact
ctttctgcctcctcatctgtaaccttggaggggttttgataaagatccag
ttgtggaatttctttttaattcccatctattgcaagggtatatgtaattg
agagtcgctttattgctatgttcctttagcctataatcaataccactaat
agtagtaggggagtcctactggtgtgt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112793641_112794619
seq2: B6Ng01-145P19.b_43_1019 (reverse)

seq1  ACACACCAGTTAGTCTCCCTTACTACTATTAGT-GTATTGATTATTAGGC  49
      ||||||||||  | ||||| ||||||||||||| |||||||||| |||||
seq2  ACACACCAGTAGGACTCCCCTACTACTATTAGTGGTATTGATTA-TAGGC  49

seq1  TAAAGGAACATAGCAATAAAGCGACTCTCAATTACATATACCCTTGCAAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAACATAGCAATAAAGCGACTCTCAATTACATATACCCTTGCAAT  99

seq1  AGATGGGAATTAAAAAAGAAATCCACAACTGGATCTTTATC-AAACCCCT  148
      ||||||||||||||||  || |||||||||||||||||||| ||||||||
seq2  AGATGGGAATTAAAAAGAAATTCCACAACTGGATCTTTATCAAAACCCCT  149

seq1  -CAAGGTTACAGATGAGGAGGCAGAAAGAGTATAAGAGCCAGAGATGATG  197
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTTACAGATGAGGAGGCAGAAAGAGTATAAGAGCCAGAGATGATG  199

seq1  GATAACTTCAAGGAAACAGTGTCTTCTATATACAATAGGGCTGTTTTACA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACTTCAAGGAAACAGTGTCTTCTATATACAATAGGGCTGTTTTACA  249

seq1  TAATTTTAAATCTTCAATAAGAGCCCATTAAGCAATCACCTTTGGACTAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTAAATCTTCAATAAGAGCCCATTAAGCAATCACCTTTGGACTAA  299

seq1  AGATATAGTTCACCTCTACTCTACCTCGAACTATAGTTCTTGGAACAGCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAGTTCACCTCTACTCTACCTCGAACTATAGTTCTTGGAACAGCT  349

seq1  TCCTGCTAAGTCCATCTTCTGTTGGATTTTGATGCTTGATTTCTCATACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTAAGTCCATCTTCTGTTGGATTTTGATGCTTGATTTCTCATACA  399

seq1  TGAGTTGGTATCAAGAAAAATGAAACCAACAATTCCATCTTAATTACTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGGTATCAAGAAAAATGAAACCAACAATTCCATCTTAATTACTTG  449

seq1  GTCCACTAAAGGGGATAAATAGAGATAAGCTGCCTTTCAAGGACCAGCCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACTAAAGGGGATAAATAGAGATAAGCTGCCTTTCAAGGACCAGCCA  499

seq1  TAACTTACGTGAATGCACAGCTTCTCTATTGCTGTGCAGCGGTGAGAGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTACGTGAATGCACAGCTTCTCTATTGCTGTGCAGCGGTGAGAGAA  549

seq1  TTGCTGATTTCTCTCCCCAAGGTGAATGATTCAGACTCAGGAGCGATCAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGATTTCTCTCCCCAAGGTGAATGATTCAGACTCAGGAGCGATCAA  599

seq1  GACAATGAATGGCTTGCGATGCATTGTGGCATTGTTTGCTTAGATTTAAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGAATGGCTTGCGATGCATTGTGGCATTGTTTGCTTAGATTTAAC  649

seq1  GTAAACACACGTTTTTTGAGCAAACTGGAGCTTGTGGCTAGATGAAGGTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACACACGTTTTTTGAGCAAACTGGAGCTTGTGGCTAGATGAAGGTC  699

seq1  AGTCCAAGTAAGAAAGACCTACACAAATCATGTGTGGCCAAATAGAAATG  747
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGTCCAAGTAAGAAAGACCTCCACAAATCATGTGTGGCCAAATAGAAATG  749

seq1  CAAACTCTTTAATAGGAGCTACCAGAGAGACAGCTCAGAGAGAAGGATGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCTTTAATAGGAGCTACCAGAGAGACAGCTCAGAGAGAAGGATGA  799

seq1  GGATAGTGGCTTACCTGTGCTGAGAATCATTCTGATCTGTAGATGGTATC  847
      ||||||||||||||| |||  ||||||||||  |||||||||||||||||
seq2  GGATAGTGGCTTACC-GTGAGGAGAATCATTGGGATCTGTAGATGGTATC  848

seq1  GTCAAACATTCATCATGACCGTGGAAAAGACGAACTACATGGCCACCGAG  897
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTCAAACATTCATCATGACCG-GGAAAAGACGAACTACATGGCCACCGAG  897

seq1  TAAGTATCCTATGAAAGAATGGTATACCACCATAACTGATCAAAAGCCTA  947
      |||||||| || ||||||| || |||||||||||  || |||||||||| 
seq2  TAAGTATCGTACGAAAGAAGGGGATACCACCATACATG-TCAAAAGCCTG  946

seq1  AGGAGAACACTATGTTCAATACGGGTGAATTC  979
      ||||| ||| ||||||||||||||| ||||||
seq2  AGGAGGACAATATGTTCAATACGGG-GAATTC  977