BAC Information

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BAC

Clone NameB6Ng01-146D05
Chromosome2 (Build37)
Map Location 53,544,518 - 53,545,687
singlet/doubletsinglet
Overlap genenone
Upstream geneStam2, Fmnl2, Prpf40a, Arl6ip6, LOC666872, LOC666876
Downstream geneLOC207933, Rprm, LOC666913, LOC626563, LOC100041792, LOC100042878, Galnt13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146D05.bB6Ng01-146D05.g
ACCDH943408DH943409
length1,1551,081
definitionDH943408|Mus musculus domesticus DNA, BAC clone: B6Ng01-146D05, 5' end.DH943409|Mus musculus domesticus DNA, BAC clone: B6Ng01-146D05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaatgagtactgtacaatgggaggagtattttcagatgcactt
ctctggaaatgtgttcacattttatttaaagccaagatttgaaagaaaga
attcccaggtagggtgtaatttcagaacaatcaatttaatactaatttaa
tccatcagtacttgagtgctaattaaatatcatcactattctaggtgcta
gagaacattaaagactgagacagatagattcatattgttatggagtttgc
ctagaatggcaaggcataaaaacaataactttatataataaatactatgc
cagcaggcaataaatcaggtagacatgacagagtatctgaattttttgct
ttagattgagtggttgggggaacacattcggatttaatgttactatggat
gacaatgagccaatcactcagagaaagggaagcatattgctatgagaagc
catactgaatgtaaaggactgtgggatgtaggatcctctgtgcttagaaa
acaggtagtaggtttgtctgctgcacagtggaaacgggagagtggagggg
agactgatgaaaaccctgttttacagactgagtgtccatcactatgatca
gcaaggatgtgctcagtaacaaggaagagatgctaggtttaagttaggaa
aaaagttgataacgattctgtgtttaaacttggagcaagtacaaagaaac
gtaaacattctctgatattaaaactttaaatgacatgatagcagatagtg
atgttttctcagtagacaagcctagagactagaaaaaggggtaggacaaa
agctggtcaacataaacacaggaatcatggtcaggatcaggattggctag
tgacaacatgttttacatgttgatctgctaacagggtactgcatgtgcca
caccaacattaccaggattgtgtgtaacatggcggtgggaactgttggcc
tcagttcatgttttcagtatttcttctgtgaaacttcactctacacttca
gcatacttttttattactatatttagagtgttctgagaaatatactgcat
agtatccatgttatctgtgtttatgtgtaatatacatgacctaccaactg
aattaattcattcattgttttaattagtcatattttaaaccttatgtgtc
tctat
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaatcccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggtttttcc
agttttgttgagtatagccttttgtagaaggatctgatggtgttttggat
ttcttcaggatctgttgttatgtctcccttttcatttctgatttttgtta
attaggattttgtccctgtgccctttagtgagtctagctaagggtttatc
tatcttgtgattttctcaaagaaccaactcctcgtttgggtaattctttg
aatagtcttcttgtttccactggttgatttcaccccctgagtttgattat
ttcctgcatctactcctcttggggtgaatttgcttccttttttctagggc
ttttagagggttgtcaagctgctagattgtgctgctcccgttcttctgga
agcactcagcgctattagtttccctctagaaagctttcttgggtccaagg
ttgggtacgtgggcttcatttcataaactcaaaagtttaatgtcttctta
tatcttccttgacaaggtatcatgtaaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_53544518_53545687
seq2: B6Ng01-146D05.b_47_1201

seq1  GAATTCTCAATGAGTACTGTACAATGGGAGGAGTATTTTCAGATGCACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAATGAGTACTGTACAATGGGAGGAGTATTTTCAGATGCACTT  50

seq1  CTCTGGAAATGTGTTCACATTTTATTTAAAGCCAAGATTTGAAAGAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAAATGTGTTCACATTTTATTTAAAGCCAAGATTTGAAAGAAAGA  100

seq1  ATTCCCAGGTAGGGTGTAATTTCAGAACAATCAATTTAATACTAATTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGGTAGGGTGTAATTTCAGAACAATCAATTTAATACTAATTTAA  150

seq1  TCCATCAGTACTTGAGTGCTAATTAAATATCATCACTATTCTAGGTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCAGTACTTGAGTGCTAATTAAATATCATCACTATTCTAGGTGCTA  200

seq1  GAGAACATTAAAGACTGAGACAGATAGATTCATATTGTTATGGAGTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACATTAAAGACTGAGACAGATAGATTCATATTGTTATGGAGTTTGC  250

seq1  CTAGAATGGCAAGGCATAAAAACAATAACTTTATATAATAAATACTATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATGGCAAGGCATAAAAACAATAACTTTATATAATAAATACTATGC  300

seq1  CAGCAGGCAATAAATCAGGTAGACATGACAGAGTATCTGAATTTTTTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGCAATAAATCAGGTAGACATGACAGAGTATCTGAATTTTTTGCT  350

seq1  TTAGATTGAGTGGTTGGGGGAACACATTCGGATTTAATGTTACTATGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTGAGTGGTTGGGGGAACACATTCGGATTTAATGTTACTATGGAT  400

seq1  GACAATGAGCCAATCACTCAGAGAAAGGGAAGCATATTGCTATGAGAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGAGCCAATCACTCAGAGAAAGGGAAGCATATTGCTATGAGAAGC  450

seq1  CATACTGAATGTAAAGGACTGTGGGATGTAGGATCCTCTGTGCTTAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGAATGTAAAGGACTGTGGGATGTAGGATCCTCTGTGCTTAGAAA  500

seq1  ACAGGTAGTAGGTTTGTCTGCTGCACAGTGGAAACGGGAGAGTGGAGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTAGTAGGTTTGTCTGCTGCACAGTGGAAACGGGAGAGTGGAGGGG  550

seq1  AGACTGATGAAAACCCTGTTTTACAGACTGAGTGTCCATCACTATGATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGATGAAAACCCTGTTTTACAGACTGAGTGTCCATCACTATGATCA  600

seq1  GCAAGGATGTGCTCAGTAACAAGGAAGAGATGCTAGGTTTAAGTTAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGATGTGCTCAGTAACAAGGAAGAGATGCTAGGTTTAAGTTAGGAA  650

seq1  AAAAGTTGATAACGATTCTGTGTTTAAACTTGGAGCAAGTACAAAGAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTGATAACGATTCTGTGTTTAAACTTGGAGCAAGTACAAAGAAAC  700

seq1  GTAAACATTCTCTGATATTAAAACTTTAAATGACATGATAGCAGATAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACATTCTCTGATATTAAAACTTTAAATGACATGATAGCAGATAGTG  750

seq1  ATGTTTTCTCAGTAGACAAGCCTAGAGACTAGAAAAAGGGGTAGGACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCTCAGTAGACAAGCCTAGAGACTAGAAAAAGGGGTAGGACAAA  800

seq1  AGCTGGTCAACATAAACACAGGAATCATGGTCAGGATCAGGATTGGCTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTCAACATAAACACAGGAATCATGGTCAGGATCAGGATTGGCTAG  850

seq1  TGACAACATGTTTTACATGTTGATCTTGCTAACAGGGTACTGCATGTGCC  900
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGACAACATGTTTTACATGTTGATC-TGCTAACAGGGTACTGCATGTGCC  899

seq1  ACACCAACATTACCAGGATTGTGTGTAACATGGCGGTGGGAACATGTGGC  950
      |||||||||||||||||||||||||||||||||||||||||||   ||||
seq2  ACACCAACATTACCAGGATTGTGTGTAACATGGCGGTGGGAACTGTTGGC  949

seq1  CTCAGTTCATGTTTTCAGTAATTCCTCTGTGAAACTTCACTCTAACACTT  1000
      |||||||||||||||||||| ||| |||||||||||||||||| ||||||
seq2  CTCAGTTCATGTTTTCAGTATTTCTTCTGTGAAACTTCACTCT-ACACTT  998

seq1  CAGCATAC-TTTTTATTACTATAATGTCAGAGTGTTCTGAGAAAATATAC  1049
      |||||||| ||||||||||||||   | ||||||||||||| ||||||||
seq2  CAGCATACTTTTTTATTACTATA--TTTAGAGTGTTCTGAG-AAATATAC  1045

seq1  TGCATATGTATTCCATGTTATCTGTGTTTTATGTGTAATATACATGACTT  1099
      |||||| ||| ||||||||||||||| ||||||||||||||||||||| |
seq2  TGCATA-GTA-TCCATGTTATCTGTG-TTTATGTGTAATATACATGACCT  1092

seq1  ACACACATGATATAAATTCATTTCATTGTTTTAAAATTTAGTCCTATATT  1149
      || ||  ||| || |||||| |||||||||||||   |||||| ||| ||
seq2  AC-CAACTGA-ATTAATTCA-TTCATTGTTTTAA---TTAGTCATAT-TT  1135

seq1  TAAACCTTATGTTGTCTCTAT  1170
      ||||||||||| |||||||||
seq2  TAAACCTTATG-TGTCTCTAT  1155