BAC Information

Click to search

BAC

Clone NameB6Ng01-146G02
Chromosome2 (Build37)
Map Location 87,847,458 - 87,848,546
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160
Downstream geneOlfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146G02.bB6Ng01-146G02.g
ACCDH943540DH943541
length1,2221,093
definitionDH943540|Mus musculus domesticus DNA, BAC clone: B6Ng01-146G02, 5' end.DH943541|Mus musculus domesticus DNA, BAC clone: B6Ng01-146G02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccctgccctgcgtagtgcgtcagcc
ctgcgcagagaggcaatgcgcagagaggcagtgcgcagactcattcattc
ccagagaggaacaaaggaaaatacaacaggcatttccggtctttgaagga
gccgagggtgggcgtgtccacgctccggtagaatacttacaaattaaaga
gcttgccgagtcggtccgtaaatacggaaccaatgctaattttaccttgg
tgcagttagacaggctcgccggcatggcactaactcctgctgactggcaa
acggttgtaaaagccgctctccctagtatgggcaaatatatggaatggag
agctctttggcatgaaactgcacaagcgcaggcccgagcaaacgcagctg
ctttgactccagagcagagagattggacttttgacttgttaacgggtcag
ggagcttattctgctgatcaaacaaactaccattggggagcttatgccca
gatctcttccacggctattagggcctggaaggcgctctcccgagcaggtg
aaaccactggtcaattaacaaaagttgtccagggacctcaggaatccttc
tcagattttgtggccagaatgacagaggcagcagagcgtatttttggaga
ttcagagcaagccgcgcctctggtagaacagctaatctatgagcaagcca
caaaggagtgccgagcggccatagccccaagaaagaacaaaggcttacaa
gactggctcagggtctgtcgagagcttgggggacctctcaccaatgcagg
cttagcggcgccatctcaatctcagaccgctccatgagcagaaatatcag
aggacatgttttactgcgaaagcctgggcattttagaaagattgcaaagc
tccagaataacaggaggacttctcactcttgcctctaagtgtggcaaggg
ttatcatgagctgacaaggtagctctgtgaaggaattaaggcagattctc
cccaactgtagtcattcactgaagtgccaaacggtcattcggctctcggt
ccagggccctcagagatagtag
gaattccttcgtgaaactgtttaattgctcacttatttcgccatggggat
ttgaatactactgcctgtattcctagaagctcatgtgagattaaagtcct
aaaagcaaaccttaaaatgtcctgcttttccttgaagggtaactttttaa
gggaggtatactttccttgaagaacacaggtgtgtcaaaaatggaaaatg
agaaatgctatcatggatttatatttttcttttaagtgttaaacatactt
tctgttcaaaaataaactctggctcacaacagtgaagaaggaggtgaatg
agagaagggtagtcatctggtaagtattcttatcacaatcctcagatgtt
gacactgggtgggactacagtggttcagttctaacaatcaccatctagaa
agctgttaattgactttgaccatgtctacagccaaccatttatttcatcc
tcttggtgagtcaaaaagataaataaatttaaaaaaaaataaagaaaaac
taactaaatccaagtaccctcaaagtgtgctacttttaagacattaatcc
atattactagaccttgaaacatctgaatatgaatctttcttagtaaggta
ttaactattaactaaaaataaacagagccaggcatgatggaatgtacctt
tgacctagtgcttaggaggctgatgtaggttgaactctgtgagttagagg
tgaggtcagcttgatcatttagggagtgccaggccaaccaagtctacata
atgagacacagcctcaaaacaacaacaccaataaaggcatgaagaaacaa
agaagggaaagatttagatagcaatttgtatatacatatatattgtaaaa
tacactgatttctctttaactttaatgagatcattacctgtaagcaaaat
cgtgtattaaacctgtaggagagatcataaacattcacagaaaattaagt
gaaggaagtggtgacatttagtgtttggacctctgaataattaggtatgc
caatatggtcccattccatcattctcagattataggctaatccttagaca
tgggtcgatgtttgtcttcttgacatttcttaagctctgagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87847458_87848546
seq2: B6Ng01-146G02.g_67_1159 (reverse)

seq1  TCCTCAGAAGCTAAGGAAATGTTCAAGAAGACAAACATCGA-CCATGTCT  49
      ||||||| |||| | |||||| ||||||||||||||||||| ||||||||
seq2  TCCTCAG-AGCTTAAGAAATG-TCAAGAAGACAAACATCGACCCATGTCT  48

seq1  AAGGATTAG-CTATAATCTGAGAATGATGGAATGGGACCAATATGGCATT  98
      ||||||||| ||||||||||||||||||||||||||||||   ||||| |
seq2  AAGGATTAGCCTATAATCTGAGAATGATGGAATGGGACCATATTGGCA-T  97

seq1  ACCTAATTATTCAGAGTTCCAAACACTAAATGTCA-CACTTCTTTCAC-T  146
      |||||||||||||||| |||||||||||||||||| |||||| ||||| |
seq2  ACCTAATTATTCAGAGGTCCAAACACTAAATGTCACCACTTCCTTCACTT  147

seq1  AATTTTCTGTGAATG-TTATGATCTCTCCTACAGGTTTAATACACGATTT  195
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AATTTTCTGTGAATGTTTATGATCTCTCCTACAGGTTTAATACACGATTT  197

seq1  TGCTTACAGGTAATGATCTCATT-AAGTTAAAGAGAAATCAGTGTATTTT  244
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGCTTACAGGTAATGATCTCATTAAAGTTAAAGAGAAATCAGTGTATTTT  247

seq1  ACAATATATATGTATATACAAATTGCTATCTAAATC-TTCCCTTCTTTGT  293
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACAATATATATGTATATACAAATTGCTATCTAAATCTTTCCCTTCTTTGT  297

seq1  TTCTTCATGCCTTTATTGGTGTTGTTGTTTTGAGGCTGTGTCTCATTATG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATGCCTTTATTGGTGTTGTTGTTTTGAGGCTGTGTCTCATTATG  347

seq1  TAGACTTGGTTGGCCTGGCACTCCCTAAATGATCAAGCTGACCTCACCTC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTGGTTGGCCTGGCACTCCCTAAATGATCAAGCTGACCTCACCTC  397

seq1  TAACTCACAGAGTTCAACCTACATCAGCCTCCTAAGCACTAGGTCAAAGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCACAGAGTTCAACCTACATCAGCCTCCTAAGCACTAGGTCAAAGG  447

seq1  TACATTCCATCATGCCTGGCTCTGTTTATTTTTAGTTAATAGTTAATACC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCCATCATGCCTGGCTCTGTTTATTTTTAGTTAATAGTTAATACC  497

seq1  TTACTAAGAAAGATTCATATTCAGATGTTTCAAGGTCTAGTAATATGGAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAGAAAGATTCATATTCAGATGTTTCAAGGTCTAGTAATATGGAT  547

seq1  TAATGTCTTAAAAGTAGCACACTTTGAGGGTACTTGGATTTAGTTAGTTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCTTAAAAGTAGCACACTTTGAGGGTACTTGGATTTAGTTAGTTT  597

seq1  TTCTTTATTTTTTTTTAAATTTATTTATCTTTTTGACTCACCAAGAGGAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATTTTTTTTTAAATTTATTTATCTTTTTGACTCACCAAGAGGAT  647

seq1  GAAATAAATGGTTGGCTGTAGACATGGTCAAAGTCAATTAACAGCTTTCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAATGGTTGGCTGTAGACATGGTCAAAGTCAATTAACAGCTTTCT  697

seq1  AGATGGTGATTGTTAGAACTGAACCACTGTAGTCCCACCCAGTGTCAACA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGTGATTGTTAGAACTGAACCACTGTAGTCCCACCCAGTGTCAACA  747

seq1  TCTGAGGATTGTGATAAGAATACTTACCAGATGACTACCCTTCTCTCATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGATTGTGATAAGAATACTTACCAGATGACTACCCTTCTCTCATT  797

seq1  CACCTCCTTCTTCACTGTTGTGAGCCAGAGTTTATTTTTGAACAGAAAGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCTTCTTCACTGTTGTGAGCCAGAGTTTATTTTTGAACAGAAAGT  847

seq1  ATGTTTAACACTTAAAAGAAAAATATAAATCCATGATAGCATTTCTCATT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAACACTTAAAAGAAAAATATAAATCCATGATAGCATTTCTCATT  897

seq1  TTCCATTTTTGACACACCTGTGTTCTTCAAGGAAAGTATACCTCCCTTAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTTTGACACACCTGTGTTCTTCAAGGAAAGTATACCTCCCTTAA  947

seq1  AAAGTTACCCTTCAAGGAAAAGCAGGACATTTTAAGGTTTGCTTTTAGGA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTACCCTTCAAGGAAAAGCAGGACATTTTAAGGTTTGCTTTTAGGA  997

seq1  CTTTAATCTCACATGAGCTTCTAGGAATACAGGCAGTAGTATTCAAATCC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCTCACATGAGCTTCTAGGAATACAGGCAGTAGTATTCAAATCC  1047

seq1  CCATGGCGAAATAAGTGAGCAATTAAACAGTTTCACGAAGGAATTC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCGAAATAAGTGAGCAATTAAACAGTTTCACGAAGGAATTC  1093