BAC Information

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BAC

Clone NameB6Ng01-146G05
Chromosome2 (Build37)
Map Location 173,818,976 - 173,819,796
singlet/doubletsinglet
Overlap genenone
Upstream geneSpo11, Rae1, Rbm38, Ctcfl, EG619800, Pck1, Zbp1, Tmepai, 1700021F07Rik, 1700030G11Rik, LOC100043911, Rab22a, 1700010B08Rik, Vapb, LOC620189, LOC664880, LOC100043912
Downstream geneLOC664901, Stx16, Npepl1, Nespas, Gnas, Th1l, Ctsz, Rpl30-ps5, Tubb1, Atp5e, Slmo2, LOC664967, LOC100043757, Edn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146G05.bB6Ng01-146G05.g
ACCDH943546DH943547
length1,143823
definitionDH943546|Mus musculus domesticus DNA, BAC clone: B6Ng01-146G05, 5' end.DH943547|Mus musculus domesticus DNA, BAC clone: B6Ng01-146G05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaggctaaaaccatctgggcctgagccttttctggttgggagac
ttttaatgactgcttttatttcaataggagttgtaggtctgattaaattg
gttatctgagcttgatttaactttggcaaggggtagtatctattgagaaa
agtatccatttcttttagatttttcaatttggtggagtacaggtttttaa
actatgtccttattatttcctggatttccttgatgtctgttgttatgttc
cccctttcaattctgattttattagcttggatattctttctctgcctttt
aattaatttgaatgagggtttgtctagcttattgattttctcaaaaagcc
aactcttttattattgattctttgaattattctgtttctattttattgat
ttcatccctctttcttgccacctactcctttagggtgctatttaattttt
tttctagctctttcaggagtgctgttcagttgctaatatgagatcttgcc
agttttttattttttaaatgcaggcacttaatgccatgaaattgtctctt
agaactgcctttattgtgtctcataagtttgagtatgttgtgtattcatt
ttaatttaattctaggaagtctttaatctctttatttctgtcttgactaa
tttttccattcactacggagttattagtgtctgtgagtggctaagtgttc
tgttgtttctgttgatactcagctttaacccatggtggtctgagaggatg
ctccttgcatctttgtgtctgagcatgtggtcaattttggagaaagtttt
ccaaggttctaagaagtatattctcttgtgttgggtgatacgttctataa
atatctcttagatccatttgttataacatctgttagttccagcatttctc
tgtttagttttgtctggatgactgtctgttgatgagagtgagtattgcag
tcttcctcatttcatgggtgaggggtcaatatggaatataagctggagta
atgtttctttacaaccatgggtgctcttggtgtttgggcatagacgttaa
gaaataaagtgcatcttggtgattttttcttctatgggtagtgggatatt
cgaacataaccccctaacctatgaacactgtatttgtagaaaa
gaattctgtgcggtaggggaggggcaaggccctcgagtcccaaggccttg
agtctatactttggctactgggggtgaaaaagagccacaggacaccaagt
tgttctagaaatcacaggtggtcacctggctggcatcaaatgagacagga
cactggctatgggccaaggctctccttgtcattcttgcttctccactgtg
gaccctttccctcacctgcctacccagaccattcctctcagcccgacaag
ggacactgtgctcagaattcaggccccattccccatttttactatgtttg
tctgttcgtggagcacacagacagcctgacacctaaccctgcctccagag
gtgagtgctatgttgggggaaggggggttctattggaacctttaagaata
agacttatgagtcaggagctctgctggtcatcattattaccacaggggca
gggaggaggcacaagaggacagaacagagagacggcaggaggtctggctt
ctgtgatgtcaccagagcccctggaaccatccatagctgaatgaatcatt
cttcttccatcccagctaaagggctaatcactgctctcctcctagcttgt
gcctattgacttgggtcctgctgctgtgaatatagacacaatctggttga
atccggttgagtcatccctcccaccccatcctcccacctctctatatcct
ccttctgctccttccgaaaatcctgtaggccatcatcgtccatccagtcc
tctcagaggcaatcacatgggaattctgcacaccttgctcaccgtgggca
ctctttcctctctgaaccccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_173818976_173819796
seq2: B6Ng01-146G05.g_70_892 (reverse)

seq1  TGTGGGGTTCAGAGAGGAAAGAGTGCCCACGGTGAGCAAGGTGTGCAG-A  49
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGTGGGGTTCAGAGAGGAAAGAGTGCCCACGGTGAGCAAGGTGTGCAGAA  50

seq1  TTCCCATGTGATTGCCTCTGAGAGGCCTGGATGGACGATGATGGCCTACA  99
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTCCCATGTGATTGCCTCTGAGAGGACTGGATGGACGATGATGGCCTACA  100

seq1  GGATTTTCGGAAGGAGCAGAAGGAGGATATAGAGAGGTGGGAGGAT-GGG  148
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGATTTTCGGAAGGAGCAGAAGGAGGATATAGAGAGGTGGGAGGATGGGG  150

seq1  TGGGAGGGATGACTCAACCGGATTCAACCAGATTGTGTCTATATTCACAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGGATGACTCAACCGGATTCAACCAGATTGTGTCTATATTCACAG  200

seq1  CAGCAGGACCCAAGTCAATAGGCACAAGCTAGGAGGAGAGCAGTGATTAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGACCCAAGTCAATAGGCACAAGCTAGGAGGAGAGCAGTGATTAG  250

seq1  CCCTTTAGCTGGGATGGAAGAAGAATGATTCATTCAGCTATGGATGGTTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTAGCTGGGATGGAAGAAGAATGATTCATTCAGCTATGGATGGTTC  300

seq1  CAGGGGCTCTGGTGACATCACAGAAGCCAGACCTCCTGCCGTCTCTCTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCTCTGGTGACATCACAGAAGCCAGACCTCCTGCCGTCTCTCTGT  350

seq1  TCTGTCCTCTTGTGCCTCCTCCCTGCCCCTGTGGTAATAATGATGACCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTCTTGTGCCTCCTCCCTGCCCCTGTGGTAATAATGATGACCAG  400

seq1  CAGAGCTCCTGACTCATAAGTCTTATTCTTAAAGGTTCCAATAGAACCCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTCCTGACTCATAAGTCTTATTCTTAAAGGTTCCAATAGAACCCC  450

seq1  CCTTCCCCCAACATAGCACTCACCTCTGGAGGCAGGGTTAGGTGTCAGGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCCCAACATAGCACTCACCTCTGGAGGCAGGGTTAGGTGTCAGGC  500

seq1  TGTCTGTGTGCTCCACGAACAGACAAACATAGTAAAAATGGGGAATGGGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTGTGCTCCACGAACAGACAAACATAGTAAAAATGGGGAATGGGG  550

seq1  CCTGAATTCTGAGCACAGTGTCCCTTGTCGGGCTGAGAGGAATGGTCTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATTCTGAGCACAGTGTCCCTTGTCGGGCTGAGAGGAATGGTCTGG  600

seq1  GTAGGCAGGTGAGGGAAAGGGTCCACAGTGGAGAAGCAAGAATGACAAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCAGGTGAGGGAAAGGGTCCACAGTGGAGAAGCAAGAATGACAAGG  650

seq1  AGAGCCTTGGCCCATAGCCAGTGTCCTGTCTCATTTGATGCCAGCCAGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTTGGCCCATAGCCAGTGTCCTGTCTCATTTGATGCCAGCCAGGT  700

seq1  GACCACCTGTGATTTCTAGAACAACTTGGTGTCCTGTGGCTCTTTTTCAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACCTGTGATTTCTAGAACAACTTGGTGTCCTGTGGCTCTTTTTCAC  750

seq1  CCCCAGTAGCCAAAGTATAGACTCAAGGCCTTGGGACTCGAGGGCCTTGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTAGCCAAAGTATAGACTCAAGGCCTTGGGACTCGAGGGCCTTGC  800

seq1  CCCTCCCCTACCGCACAGAATTC  821
      |||||||||||||||||||||||
seq2  CCCTCCCCTACCGCACAGAATTC  823