BAC Information

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BAC

Clone NameB6Ng01-146I12
Chromosome2 (Build37)
Map Location 110,171,593 - 110,172,401
singlet/doubletsinglet
Overlap genenone
Upstream geneKif18a, Bdnf, LOC100043427, Lin7c, Lgr4, Ccdc34, LOC668797, Bbox1
Downstream gene1110018M03Rik, LOC668799, Slc5a12, Muc15, LOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146I12.bB6Ng01-146I12.g
ACCDH943653DH943654
length8081,156
definitionDH943653|Mus musculus domesticus DNA, BAC clone: B6Ng01-146I12, 5' end.DH943654|Mus musculus domesticus DNA, BAC clone: B6Ng01-146I12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacacactataccatcacttccctgttttcctcatcctaatgaat
tcacacactatactatcacatccctctcttctatgattaccagttgaaga
atagttagctctgtgtggatgctgcaagtgttgatgggtatctatggata
taagcataatcaggagaaacattgatttatttggggttttatgatctggc
agtgaaatggtatcctggggtgcaactcttgtctccagcggttggtgttc
ttctgaaagattctgatacacttttgagagactgcttgattgtgggatgt
tcctataggggtcagtgagcaggggatctcagtgaaagaacaatgaaact
cagtttgccctgatttacatgtcctgtgctgtgccaagatgtcttggaat
ctgacattaaatcacatatatttgccatatttaagcacagcacaattttg
gaaaaaaggtttcagataacaactaactcagccctatgagttgaacaaag
cttaagacatgtttacattgaagctctttacgaattacatatggcttcat
ccctaagatgagttcttgttgacttagaagcaatgctcaagataagggtc
ttggaagagtgatggaggtaaacacaatccctgaggggtcaggagttatc
ctgaccctaaggtaacacagagtcacttaggctgttgtgaaatacagatg
gcatctctcacaaggatgagttttatggcctagaaataatgttcaaggtt
ttcaggggaaggagtatgggacaagtagaacatcattcttgaagatagca
gtggaacc
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcagcatccttactcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacagcagtcagaatggctaagatcaaaaattcaggtagcaac
agatgctggcgaggatgtggagaaagaggagcactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactatcggaggatcctgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagatattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggggagggcatcatcctgagtgaggtaacccagtcaca
aagaatccacgtgatatgtactcactgataagtggatattagcccagaaa
cttagaataccgaagatataagataaaatttgctaaatgcatgaaactta
agaagaatgaagaccaaagtgtggatactttcccccttcttagaattggg
aacgaaacagccatggaaagagttacagagacaaagtttggagctgagat
gaaaggatggaccatctagagactgccatacccggggatccatcccataa
tcagcctccaaacacagacaccattgcacacactagcaagatttgctgag
agaccctgatatagctgtctctgtgagactatgctggggcctagcaacac
atagtggatactcacagtcagctattgatggatccaggaccccgatggat
gaactagaagaagtacccaaggagctgagggtctgcaccttatagtagca
cacttatgactaaccagtacacaccagagctcggtccttgcctgatagtt
tcagaagaatgactagacggcatcggggaaagacaggccaatgatgtgca
aacttaaatgctcaatcacgcgaaatgccatggccagagaatgtcgcaat
gctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_110171593_110172401
seq2: B6Ng01-146I12.b_43_850

seq1  GAATTCACACACTATACCATCACTTCCCTGTTTTCCTCATCCTAATGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACACTATACCATCACTTCCCTGTTTTCCTCATCCTAATGAAT  50

seq1  TCACACACTATACTATCACATCCCTCTCTTCTATGATTACCAGTTGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACTATACTATCACATCCCTCTCTTCTATGATTACCAGTTGAAGA  100

seq1  ATAGTTAGCTCTGTGTGGATGCTGCAAGTGTTGATGGGTATCTATGGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTAGCTCTGTGTGGATGCTGCAAGTGTTGATGGGTATCTATGGATA  150

seq1  TAAGCATAATCAGGAGAAACATTGATTTATTTGGGGTTTTATGATCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATAATCAGGAGAAACATTGATTTATTTGGGGTTTTATGATCTGGC  200

seq1  AGTGAAATGGTATCCTGGGGTGCAACTCTTGTCTCCAGCGGTTGGTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAATGGTATCCTGGGGTGCAACTCTTGTCTCCAGCGGTTGGTGTTC  250

seq1  TTCTGAAAGATTCTGATACACTTTTGAGAGACTGCTTGATTGTGGGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAAGATTCTGATACACTTTTGAGAGACTGCTTGATTGTGGGATGT  300

seq1  TCCTATAGGGGTCAGTGAGCAGGGGATCTCAGTGAAAGAACAATGAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATAGGGGTCAGTGAGCAGGGGATCTCAGTGAAAGAACAATGAAACT  350

seq1  CAGTTTGCCCTGATTTACATGTCCTGTGCTGTGCCAAGATGTCTTGGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGCCCTGATTTACATGTCCTGTGCTGTGCCAAGATGTCTTGGAAT  400

seq1  CTGACATTAGATCACATATATTTGCCATATTTAAGCACAGCACAATTTTG  450
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATTAAATCACATATATTTGCCATATTTAAGCACAGCACAATTTTG  450

seq1  GAAAAAAGGTTTCAGATAACAACTAACTCAGCCCTATGAGTTGAACAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGGTTTCAGATAACAACTAACTCAGCCCTATGAGTTGAACAAAG  500

seq1  CTTAAGACATGTTTACATTGAAGCTCTTTACAAATTACATATGGCTTCAT  550
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTTAAGACATGTTTACATTGAAGCTCTTTACGAATTACATATGGCTTCAT  550

seq1  CCCTAAGATGAGTTCTTGTTGACTTAGAAGCAATGCTCAAGATAAGGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGATGAGTTCTTGTTGACTTAGAAGCAATGCTCAAGATAAGGGTC  600

seq1  TTGGAAGAGTGATGGAGGTAAACACAATCCCTGAGGGGTCAGGAGTTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGAGTGATGGAGGTAAACACAATCCCTGAGGGGTCAGGAGTTATC  650

seq1  CTGACCCTAAGGTAACACAGAGTCACTTAGGCTGTTGTGAAATACAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCTAAGGTAACACAGAGTCACTTAGGCTGTTGTGAAATACAGATG  700

seq1  GCATCTCTCACAAGGATGAGTTTTATGGCCTAGAAATAATGTTCAAGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCTCACAAGGATGAGTTTTATGGCCTAGAAATAATGTTCAAGGTT  750

seq1  TTCAGGGGAAGGGGTATGGGACAAGTAAAACATAAATTCTTGAAGATAGC  800
      |||||||||||| |||||||||||||| |||||  |||||||||||||||
seq2  TTCAGGGGAAGGAGTATGGGACAAGTAGAACAT-CATTCTTGAAGATAGC  799

seq1  AGTGGAACC  809
      |||||||||
seq2  AGTGGAACC  808