BAC Information

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BAC

Clone NameB6Ng01-146O16
Chromosome2 (Build37)
Map Location 112,075,001 - 112,075,965
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187
Downstream geneAgpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146O16.bB6Ng01-146O16.g
ACCDH943937DH943938
length969971
definitionDH943937|Mus musculus domesticus DNA, BAC clone: B6Ng01-146O16, 5' end.DH943938|Mus musculus domesticus DNA, BAC clone: B6Ng01-146O16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttttgcctgcatatatgtgagtggaccgtgtgcgtgcttggt
gcctgaggaggtagggagaggcatcaggttccccagagctggatttctgg
gtgggtgggaatcaccacatgggtgttggtaactgagcctgagtcctctc
caagagcagcaagggtttttaatcattgatccctctctccagccctctgc
acttaatcttttaaacataaactagccagttcaggaagctttattaaact
tgagaatccccttcatagagcacatatattaatatacaaattactctaaa
aattaagcatacatgcagttaactttcaatgatatacagtttggctatgt
gtccatctacaaacaaacaaacaaaccacaaaacaacaacaaacagatca
attctcccagggcctatgatcactcctaggtgtaggtttctgaccagagt
tctagtgctaggcatgtattccccaccagagaggactacaaatccaatcg
gaatacagtcagttgtccctcacacaggcatgccaccactattgtatcag
tgcacagggttcatgactaggtaagaccatggaaacatttccttccccca
gcagcccattccacacactctagcactgtgaatgaacactgccagcaggt
agtgagtttccaactcagttttcgtatggttcaagtgttcgatgtcttcc
ttccataataaggtcttaatgatttttgggaaatagcatcattcacccat
gtgtggtgcttctattccaactcccaactcttgctttttttttttttttt
tttcttttgagacagtgtttctctatgtagccctgggatgtccttccaga
ccaggctggcccttgacttcacagagatccacctgcctctgcctcccaag
tgcttgcgccactaccgctcaaactcttttgtaaagcatgttttatttca
gttagcttacaaagtagca
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccaatcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaagggacccccctcctttgttggg
gggattgcaggcttgtacaacccctctggaaatcattctggcggttcctc
aaaaaattggacatagtactaccggaggatcccgcaatacctctccgggg
catatatccaaaaaaggtcccaaccagtaaaaaggacacttactccacta
tgttcataccacccttatttataataccagaagctggaaagaacccagaa
tcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atgattggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
gaactcagatatgtactcactgataagtggatattatcccagaaacttac
aatacccaaggtataagatacaatttgctaaacacatgaaactcaagaag
aacaaagaccaaagtgtggacgcttttgccccttcttatatttgggaaca
aaacacccatggaaggagttactgagacaacgtttgaagctgagacaaaa
ggatggaccatcttgagactgccgtatcagggagccatcccccaattagc
tttctaatttgctgacgccatggtatacaatagcaaattattgttgaaag
gaccctgataaagctgtctccctgtatgactatgcccggatcctcccaaa
ccaataagtggatgctcccagtccagccattgaacggatcgctccgggcc
cccaccctaagaacttaacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112075001_112075965
seq2: B6Ng01-146O16.b_48_1016 (reverse)

seq1  TGCTACTTTGTAAGCTAACTGAAAT-AAACATGCTTTAACAAAAAGAGTT  49
      ||||||||||||||||||||||||| ||||||||||||   |||||||||
seq2  TGCTACTTTGTAAGCTAACTGAAATAAAACATGCTTTA--CAAAAGAGTT  48

seq1  TGAGCGGTAGTGGCGCAAGCACTTGGGAGGCAGAGGCAGGTGGATCTCTG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCGGTAGTGGCGCAAGCACTTGGGAGGCAGAGGCAGGTGGATCTCTG  98

seq1  TGAAGTCAA-GGCCAGCCTGGTCT-GCAGGACAT-CCAGGGCTACATAGA  146
      ||||||||| |||||||||||||| | ||||||| |||||||||||||||
seq2  TGAAGTCAAGGGCCAGCCTGGTCTGGAAGGACATCCCAGGGCTACATAGA  148

seq1  GAAACACTGTCTCAAAAG--AAAAAAAAAAAAAAAAAGCAAGAGTTGGGA  194
      ||||||||||||||||||  ||||||||||||||||||||||||||||||
seq2  GAAACACTGTCTCAAAAGAAAAAAAAAAAAAAAAAAAGCAAGAGTTGGGA  198

seq1  GTTGGAATAGAAGCACCACACATGGGTGAATGATGCTATTTCCCAAAAAT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAATAGAAGCACCACACATGGGTGAATGATGCTATTTCCCAAAAAT  248

seq1  CATTAAGACCTTATTATGGAAGGAAGACATCGAACACTTGAACCATACGA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGACCTTATTATGGAAGGAAGACATCGAACACTTGAACCATACGA  298

seq1  AAACTGAGTTGGAAACTCACTACCTGCTGGCAGTGTTCATTCACAGTGCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAGTTGGAAACTCACTACCTGCTGGCAGTGTTCATTCACAGTGCT  348

seq1  AGAGTGTGTGGAATGGGCTGCTGGGGGAAGGAAATGTTTCCATGGTCTTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTGTGGAATGGGCTGCTGGGGGAAGGAAATGTTTCCATGGTCTTA  398

seq1  CCTAGTCATGAACCCTGTGCACTGATACAATAGTGGTGGCATGCCTGTGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTCATGAACCCTGTGCACTGATACAATAGTGGTGGCATGCCTGTGT  448

seq1  GAGGGACAACTGACTGTATTCCGATTGGATTTGTAGTCCTCTCTGGTGGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGACAACTGACTGTATTCCGATTGGATTTGTAGTCCTCTCTGGTGGG  498

seq1  GAATACATGCCTAGCACTAGAACTCTGGTCAGAAACCTACACCTAGGAGT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACATGCCTAGCACTAGAACTCTGGTCAGAAACCTACACCTAGGAGT  548

seq1  GATCATAGGCCCTGGGAGAATTGATCTGTTTGTTGTTGTTTTGTGGTTTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATAGGCCCTGGGAGAATTGATCTGTTTGTTGTTGTTTTGTGGTTTG  598

seq1  TTTGTTTGTTTGTAGATGGACACATAGCCAAACTGTATATCATTGAAAGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTAGATGGACACATAGCCAAACTGTATATCATTGAAAGT  648

seq1  TAACTGCATGTATGCTTAATTTTTAGAGTAATTTGTATATTAATATATGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCATGTATGCTTAATTTTTAGAGTAATTTGTATATTAATATATGT  698

seq1  GCTCTATGAAGGGGATTCTCAAGTTTAATAAAGCTTCCTGAACTGGCTAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTATGAAGGGGATTCTCAAGTTTAATAAAGCTTCCTGAACTGGCTAG  748

seq1  TTTATGTTTAAAAGATTAAGTGCAGAGGGCTGGAGAGAGGGATCAATGAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTAAAAGATTAAGTGCAGAGGGCTGGAGAGAGGGATCAATGAT  798

seq1  TAAAAACCCTTGCTGCTCTTGGAGAGGACTCAGGCTCAGTTACCAACACC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACCCTTGCTGCTCTTGGAGAGGACTCAGGCTCAGTTACCAACACC  848

seq1  CATGTGGTGATTCCCACCCACCCAGAAATCCAGCTCTGGGGAACCTGATG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGTGATTCCCACCCACCCAGAAATCCAGCTCTGGGGAACCTGATG  898

seq1  CCTCTCCCTACCTCCTCAGGCACCAAGCACGCACACGGTCCACTCACATA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCTACCTCCTCAGGCACCAAGCACGCACACGGTCCACTCACATA  948

seq1  TATGCAGGCAAAAATGAATTC  965
      |||||||||||||||||||||
seq2  TATGCAGGCAAAAATGAATTC  969