BAC Information

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BAC

Clone NameB6Ng01-147B05
Chromosome2 (Build37)
Map Location 158,253,206 - 158,449,675
singlet/doubletdoublet
Overlap geneB230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1
Upstream geneSrc, Blcap, Nnat, Ctnnbl1, LOC100043681, Gm691, 2610036D13Rik, 2610304G08Rik, Tgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik
Downstream geneActr5, Ppp1r16b, 2310007D09Rik, Dhx35, LOC100043891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147B05.bB6Ng01-147B05.g
ACCDH944054DH944055
length1,027521
definitionDH944054|Mus musculus domesticus DNA, BAC clone: B6Ng01-147B05, 5' end.DH944055|Mus musculus domesticus DNA, BAC clone: B6Ng01-147B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(158,253,206 - 158,254,236)(158,449,149 - 158,449,675)
sequence
gaattctgaaagacattgattcaagtattagggctcctcccccctgtgat
gatatagaaagattcggtgaatgttttcaatgttgaatattgggacttct
gatttaatcttctattactgcaagtttctgtttaaaatttttagctagtt
catcaaattgtcatcagagcttacttaattagttgtttttatataaactg
attctcaaagtggaggaaactgcctttaccttttgctagagattaagtta
atatgatttcctcttttgcccattaaattaatttgaatgaagaatgttat
ctgttgaaattgattggagtcttaattgcttagatacattacattataag
aaatgcagtacctatttttcctagtccttgtgtatatgtcttctaagcag
aggtctacttttttttcttttttcttttctttttttctttttgtaaaaag
ctagctataatgtttctcctcagatctgtggtagagtaggaagacaggta
ttaaattacgactactaaattaagaaataagaacttacgaaggcaactgg
ggagataactcagcagttaagagcagtggctggaaaaaaaaaaaaaagca
gaggctgattttcccagaggacctgggtttgatttccaggactccacatg
gcagctcacaagcatctctataactcaagtccacagtgtatgatgtgggc
agggtacatacttggtacaagtagtgtgttaacaaaggcaggtgttagtc
aagttctgactggttcactagcccctgttagaaagtttttctgaaaatta
cagtcacttttgagattgaggaaaatctcttttgctcagacctattcact
ttttatataaagactctcccatttcttctagttttagaaacttgaatctt
gttcctgaattaggcttttgagaggtaaggaaacagaggaggatttgttc
ctttccttttactgggcaggctttacacctggaagagtagctactgtggg
gggagcatgccttgtaaaggcatctca
ctaccaggacggctccacccgataagattgccctgaaagcctgctgacca
tcctcccctctcccacccaccacccagcttgcagctgttgtttggggctt
agacaccctgatcaccactccagcattgttttttttttctctttcctctt
tccccaagcacgccacgacaactcaagttttctgttttcttgattgctgt
attttctttcttcttttaagctttagccctgcactttgaaggctggttta
tttacatgacgttttaagaaaagtggcaaaaaaaaaaaaaaaaaagccgg
ccttggtggcgcacgcctttaatcccagccctcaggaggcagaggcaggc
agatttctgagttcgaggccagcctggtctacaaagtgagttcaggacag
ccagggttatacagagaaaccctgtctcgaaaaacaaaaaaacaaagaaa
gaaagaaagaaggaaggaaggaaggaaggaaggaaggaaggaaggaagga
aggaaggaaggaaggaaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_158253206_158254236
seq2: B6Ng01-147B05.b_47_1073

seq1  GAATTCTGAAAGACATTGATTCAAGTATTAGGGCTCCTCCCCCCTGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAAGACATTGATTCAAGTATTAGGGCTCCTCCCCCCTGTGAT  50

seq1  GATATAGAAAGATTCGGTGAATGTTTTCAATGTTGAATATTGGGACTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGAAAGATTCGGTGAATGTTTTCAATGTTGAATATTGGGACTTCT  100

seq1  GATTTAATCTTCTATTACTGCAAGTTTCTGTTTAAAATTTTTAGCTAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAATCTTCTATTACTGCAAGTTTCTGTTTAAAATTTTTAGCTAGTT  150

seq1  CATCAAATTGTCATCAGAGCTTACTTAATTAGTTGTTTTTATATAAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAATTGTCATCAGAGCTTACTTAATTAGTTGTTTTTATATAAACTG  200

seq1  ATTCTCAAAGTGGAGGAAACTGCCTTTACCTTTTGCTAGAGATTAAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAAAGTGGAGGAAACTGCCTTTACCTTTTGCTAGAGATTAAGTTA  250

seq1  ATATGATTTCCTCTTTTGCCCATTAAATTAATTTGAATGAAGAATGTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATTTCCTCTTTTGCCCATTAAATTAATTTGAATGAAGAATGTTAT  300

seq1  CTGTTGAAATTGATTGGAGTCTTAATTGCTTAGATACATTACATTATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAAATTGATTGGAGTCTTAATTGCTTAGATACATTACATTATAAG  350

seq1  AAATGCAGTACCTATTTTTCCTAGTCCTTGTGTATATGTCTTCTAAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGTACCTATTTTTCCTAGTCCTTGTGTATATGTCTTCTAAGCAG  400

seq1  AGGTCTACTTTTTTTTCTTTTTTCTTTTCTTTTTTTCTTTTTGTAAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTACTTTTTTTTCTTTTTTCTTTTCTTTTTTTCTTTTTGTAAAAAG  450

seq1  CTAGCTATAATGTTTCTCCTCAGATCTGTGGTAGAGTAGGAAGACAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTATAATGTTTCTCCTCAGATCTGTGGTAGAGTAGGAAGACAGGTA  500

seq1  TTAAATTACGACTACTAAATTAAGAAATAAGAACTTACGAAGGCAACTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTACGACTACTAAATTAAGAAATAAGAACTTACGAAGGCAACTGG  550

seq1  GGAGATAACTCAGCAGTTAAGAGCAGTGGCTGGAAAAAAAAAAAAAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATAACTCAGCAGTTAAGAGCAGTGGCTGGAAAAAAAAAAAAAAGCA  600

seq1  GAGGCTGATTTTCCCAGAGGACCTGGGTTTGATTTCCAGGACTCCACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGATTTTCCCAGAGGACCTGGGTTTGATTTCCAGGACTCCACATG  650

seq1  GCAGCTCACAAGCATCTCTATAACTCAAGTCCACAGTGTATGATGTGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCACAAGCATCTCTATAACTCAAGTCCACAGTGTATGATGTGGGC  700

seq1  AGGGTACATACTTGGTACAAGTAGTGTGTTAACAAAGGCAGGTGTTAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACATACTTGGTACAAGTAGTGTGTTAACAAAGGCAGGTGTTAGTC  750

seq1  AAGTTCTGACTGGTTCACTAGCCCCTGTTAGAAAGTTTTTCTGAAAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGACTGGTTCACTAGCCCCTGTTAGAAAGTTTTTCTGAAAATTA  800

seq1  CAGTCACTTTTGAGATTGAGGAAAATCTCTTTTGCTCAGACCTATTCACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACTTTTGAGATTGAGGAAAATCTCTTTTGCTCAGACCTATTCACT  850

seq1  TTTTATATAAAGACTCTCCCATTTCTTCTAGTTTTAGAAACTTGAATCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATAAAGACTCTCCCATTTCTTCTAGTTTTAGAAACTTGAATCTT  900

seq1  GTTCCTGAATTTAGGCTTTTTGAGAGGTTAAGGAAACAGAGGAGGATTTG  950
      ||||||||| |||||| |||||||||| ||||||||||||||||||||||
seq2  GTTCCTGAA-TTAGGC-TTTTGAGAGG-TAAGGAAACAGAGGAGGATTTG  947

seq1  TTTCCTTTCCTTTTACTGGGCAGGCTTTACACCTGGAAAGAGTAGCTACT  1000
       ||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  -TTCCTTTCCTTTTACTGGGCAGGCTTTACACCTGG-AAGAGTAGCTACT  995

seq1  GT--GGGGAGCATGCCCTGTAATAGCCATCTCA  1031
      ||  |||||||||||| ||||| || |||||||
seq2  GTGGGGGGAGCATGCCTTGTAA-AGGCATCTCA  1027

seq1: chr2_158449149_158449675
seq2: B6Ng01-147B05.g_71_597 (reverse)

seq1  TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT  50

seq1  CCTTCCTTCCTTCTTTCTTTCTTTCTTTGTTTTTTTGTTTTTCGAGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCTTCTTTCTTTCTTTCTTTGTTTTTTTGTTTTTCGAGACAG  100

seq1  GGTTTCTCTGTATAACCCTGGCTGTCCTGAACTCACTTTGTAGACCAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTCTGTATAACCCTGGCTGTCCTGAACTCACTTTGTAGACCAGGC  150

seq1  TGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCTGAGGGCTGGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCTGAGGGCTGGGAT  200

seq1  TAAAGGCGTGCGCCACCAAGGCCGGCTTTTTTTTTTTTTTTTTTGCCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCGTGCGCCACCAAGGCCGGCTTTTTTTTTTTTTTTTTTGCCACT  250

seq1  TTTCTTAAAACGTCATGTAAATAAACCAGCCTTCAAAGTGCAGGGCTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAAAACGTCATGTAAATAAACCAGCCTTCAAAGTGCAGGGCTAAA  300

seq1  GCTTAAAAGAAGAAAGAAAATACAGCAATCAAGAAAACAGAAAACTTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAAAGAAGAAAGAAAATACAGCAATCAAGAAAACAGAAAACTTGAG  350

seq1  TTGTCGTGGCGTGCTTGGGGAAAGAGGAAAGAGAAAAAAAAAACAATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCGTGGCGTGCTTGGGGAAAGAGGAAAGAGAAAAAAAAAACAATGCT  400

seq1  GGAGTGGTGATCAGGGTGTCTAAGCCCCAAACAACAGCTGCAAGCTGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGTGATCAGGGTGTCTAAGCCCCAAACAACAGCTGCAAGCTGGGT  450

seq1  GGTGGGTGGGAGAGGGGAGGATGGTCAGCAGGCTTTCAGGGCAATCTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTGGGAGAGGGGAGGATGGTCAGCAGGCTTTCAGGGCAATCTTAT  500

seq1  CGGGTGGAGCCGTCCTGGTAGGAATTC  527
      |||||||||||||||||||||||||||
seq2  CGGGTGGAGCCGTCCTGGTAGGAATTC  527