BAC Information

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BAC

Clone NameB6Ng01-147O08
Chromosome2 (Build37)
Map Location 9,466,726 - 9,467,675
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040710
Downstream geneLOC100040548, LOC100040566, Gata3, LOC100040768, 4930412O13Rik, Taf3, Atp5c1, Kin, Itih2, Itih5, Sfmbt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147O08.bB6Ng01-147O08.g
ACCDH944648DH944649
length1,048944
definitionDH944648|Mus musculus domesticus DNA, BAC clone: B6Ng01-147O08, 5' end.DH944649|Mus musculus domesticus DNA, BAC clone: B6Ng01-147O08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttattaagctttgcaccccaattttaatggggttatttgattt
tttggagtctaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttgatggtctt
tttgtcttattgacagtgtcttttgcctaacagaagctttgcaattttat
gaggtcccatttgttgattcttgatcttacagcataagccattgctgttc
tattcaggaattttccccctgtgcccatatcttcaatgcttttccccact
ttctcctctataagtttcactgtctctggttttatgtggagttccttgat
ccacttagatttgaccttagtacaaggagataggaatggatcaattctca
ttcttctacatgttaaccaccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatgattttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcagttctattccattggt
ctacttgtctgtcactataccagtaccatgcagtttttatcacaattgct
ctgttgcacagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atctgccaattgccctttctaattcgttgaagaattgagttagaaatttg
atggggattgcattgaatatgtagattgcttttggcaagatagccatttt
tactatattgatcctgccatccatgagcatgagagatatttccaccttcg
gagatcttctttaatttctttcttcagaaaacttgaagttcttatcatac
agatctttcaacttccttagttagagtaatgccaagggatatttaatatt
atttgtgactattgagaaggtgttgtttccctaatttccttcttcagact
gtatctttatgagagaagggcctatgacctgttggaataattttaaat
gaattcccccattcagagaaattaaaagactcctaaccccctgctgttct
gtttactgctgattccctggaagctcagaggttgtcccctgagatttcta
atggttgctattccgttaagtgagaacagtcactcctgaaggtcagttgc
tgctccagctttcctggggtttctgttccctccagccctctgcttctgct
cattgatctttgcctccttccttcccttcttcttcccatgtggctccccg
cttttctggttccttctcccctctccaggaaggacaacctcactgtggac
agaaccttcttcttacaaagttcttatctgcttggtccagtgacctgaga
tgccatactcagcacctgtatgaaccaaacctgatcatgaaagtctggcg
tcctgacatggggactcttactaacccagagcaaaggagacaggaagagg
caggcaggcggggcagttaatgcgctccttaaattgacccctcactggga
attaaacattgagcctaaagcatgttagggcaagtgctgagctatatttc
tagctgttagctgtgagtctcccattctctaatgttttcccagccattgt
ttagtgaagtttgagtttcctccatgatggaaaggtgggcaaagctccca
gagaaagagcttggtttgtactctcctctcctcagggtcacagtgctatc
tactgacacattccaagtccttataaaactgtcaggtcagcaagcacacc
ggctacccaagagaaacatctattaaccatcatgagttggattttacagc
ctcctaataacatctccctttaagtttacctagagccctgctatattata
tatgttctgccttgcctacagtttggggtatgactcagaaaagtctatag
aacaagaatacgttccctacttacagttttgaactttaactatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_9466726_9467675
seq2: B6Ng01-147O08.g_71_1014

seq1  GAATTCCCCCATTCAGAGAAATTAAAAGACTCCTAACCCCCTGCTGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCCATTCAGAGAAATTAAAAGACTCCTAACCCCCTGCTGTTCT  50

seq1  GTTTACTGCTGATTCCCTGGAAGCTCAGAGGTTGTCCCCTGAGATTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTGCTGATTCCCTGGAAGCTCAGAGGTTGTCCCCTGAGATTTCTA  100

seq1  ATGGTTGCTATTCCGTTAAGTGAGAACAGTCACTCCTGAAGGTCAGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGCTATTCCGTTAAGTGAGAACAGTCACTCCTGAAGGTCAGTTGC  150

seq1  TGCTCCAGCTTTCCTGGGGTTTCTGTTCCCTCCAGCCCTCTGCTTCTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCAGCTTTCCTGGGGTTTCTGTTCCCTCCAGCCCTCTGCTTCTGCT  200

seq1  CATTGATCTTTGCCTCCTTCCTTCCCTTCTTCTTCCCATGTGGCTCCCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATCTTTGCCTCCTTCCTTCCCTTCTTCTTCCCATGTGGCTCCCCG  250

seq1  CTTTTCTGGTTCCTTCTCCCCTCTCCAGGAAGGACAACCTCACTGTGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGGTTCCTTCTCCCCTCTCCAGGAAGGACAACCTCACTGTGGAC  300

seq1  AGAACCTTCTTCTTACAAAGTTCTTATCTGCTTGGTCCAGTGACCTGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTTCTTCTTACAAAGTTCTTATCTGCTTGGTCCAGTGACCTGAGA  350

seq1  TGCCATACTCAGCACCTGTATGAACCAAACCTGATCATGAAAGTCTGGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATACTCAGCACCTGTATGAACCAAACCTGATCATGAAAGTCTGGCG  400

seq1  TCCTGACATGGGGACTCTTACTAACCCAGAGCAAAGGAGACAGGAAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACATGGGGACTCTTACTAACCCAGAGCAAAGGAGACAGGAAGAGG  450

seq1  CAGGCAGGCGGGGCAGTTAATGCGCTCCTTAAATTGACCCCTCACTGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGGCGGGGCAGTTAATGCGCTCCTTAAATTGACCCCTCACTGGGA  500

seq1  ATTAAACATTGAGCCTAAAGCATGTTAGGGCAAGTGCTGAGCTATATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACATTGAGCCTAAAGCATGTTAGGGCAAGTGCTGAGCTATATTTC  550

seq1  TAGCTGTTAGCTGTGAGTCTCCCATTCTCTAATGTTTTCCCAGCCATTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTTAGCTGTGAGTCTCCCATTCTCTAATGTTTTCCCAGCCATTGT  600

seq1  TTAGTGAAGTTTGAGTTTCCTCCATGATGGAAAGGTGGGCAAAGCTCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGAAGTTTGAGTTTCCTCCATGATGGAAAGGTGGGCAAAGCTCCCA  650

seq1  GAGAAAAGAGCTTGGTTTGTACTCTCCTCTCCTCAGGGTCACAGTGCTAT  700
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAG-AAAGAGCTTGGTTTGTACTCTCCTCTCCTCAGGGTCACAGTGCTAT  699

seq1  CTACTGACACATTCCAAGTCCTTATAAAAACTGTCAGGGTCAGCAAGCAC  750
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  CTACTGACACATTCCAAGTCCTTAT-AAAACTGTCA-GGTCAGCAAGCAC  747

seq1  ACCGGCTACCCAAGAGAAACATCTATTAACCATCATGAGGTGGATTTTAC  800
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACCGGCTACCCAAGAGAAACATCTATTAACCATCATGAGTTGGATTTTAC  797

seq1  AG-CTCCTAATAACATCTCCCTTTAAGTTTACCTAGAGCCCTGCTATA-T  848
      || ||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGCCTCCTAATAACATCTCCCTTTAAGTTTACCTAGAGCCCTGCTATATT  847

seq1  ATATATG-TCTGCCTTGCTTACAAGTTTGGGGTATGACTCCAGAAAAGTC  897
      ||||||| |||||||||| ||| |||||||||||||||| ||||||||||
seq2  ATATATGTTCTGCCTTGCCTAC-AGTTTGGGGTATGACT-CAGAAAAGTC  895

seq1  -ATAGAAACAAAGAATACGGTCTCCTACTAACAGTTTTAGAACTTTTAAC  946
       ||||||   ||||||||| || |||||| |||||||| |||| ||||||
seq2  TATAGAA--CAAGAATACGTTC-CCTACTTACAGTTTT-GAAC-TTTAAC  940

seq1  TATC  950
      ||||
seq2  TATC  944