BAC Information

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BAC

Clone NameB6Ng01-148B16
Chromosome2 (Build37)
Map Location 165,902,534 - 165,903,685
singlet/doubletsinglet
Overlap geneSulf2
Upstream geneCdh22, Slc35c2, Elmo2, Gm1008, Zfp334, 4833422F24Rik, Slc13a3, 2810408M09Rik, Slc2a10, Eya2, Prkcbp1, LOC546780, Ncoa3
Downstream geneLOC670775, Ppia-ps2_2197.1, BC067047, Trp53rk, Arfgef2, LOC670802, Cse1l, Stau1, LOC383774, Ddx27, AI481105, 1500012F01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148B16.bB6Ng01-148B16.g
ACCDH944802DH944803
length1,2401,148
definitionDH944802|Mus musculus domesticus DNA, BAC clone: B6Ng01-148B16, 5' end.DH944803|Mus musculus domesticus DNA, BAC clone: B6Ng01-148B16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaacttttcagctggggaacgagagtaccagtgagtatgtttg
gccttgaattttttctggtgttaggagcccttttgttctttttcacatgc
tatcaagtgattaagatagggctgaaaattctagaggaaattcaggacaa
gctatcagaagtaaagcgggaagaaagagtaggaacaaaaaggaaatatg
gtacacaaaataagtatacaggcctttccaagggtcttgaacccgaggaa
aagttaaggttaggtaggaatacctggagagagattagaagaaaaagagg
aaaaagggaaaagaagaaagatcaattagcggaggtctctaggagaagga
gcctgtgctctgaagaaacagactgggagaaaaaagcggctcattatgaa
agaaaaggataccagccgccaagtaaagtgctaactagtcatttaagaaa
aaagccaaaagcggctggcgaaggccagtttgctaattggcctcagggca
atcggctaccaggtgcactcccgccctatgcggagtccccgccctgcgta
gtgcgtcagcccgtagtgcgtcagcaatgcgcagagaggcagtgcgcaga
gaggcagtgcgcagactcattcattccccgagaggaacaaaagaaaatac
aacaggcatttccagtctttgaaggagccgagggtgggcgtgtccacgct
ccggtagaatacgtacagattaaggaaattgccgagtcggtccgtaaatg
tggaatcagtgctggtttttgccttggtgcagttggacaggcttgcccgg
cgtggcactaactcctgccgactggcaaatgattacaaaaagcccgctct
ccctaatatgggcaaatatttgggaatggagatctctgtggcgagaggct
gcacaggcgcaggaccgagcaaacgctgctgctttaactccagagcagag
agattggacttttgactgttaacgggtcagagagcttattctgctgacct
gataaaaggtatcaatggaaaggtctacacagggaatgtccaatagtcct
aactatgtgtcaacttatgtggcacatggatgacatcctctgtggcaaat
aaaagacttacatgctacaaaaggccaattcgtttctactaaccttagtc
agtgggggttttcagatagccgtaagtcaatttctgaataccggacattc
ttgtgggctcttcgtggtgttgcccgtcaagcttaggcag
gaattcaagtcccagcaactacatggtagctcacaaccaccgtaatgaga
tctgacgccctcttctggcgagtctgaagacagctacagtgtacttatat
agaataataaatagatctttgggccggacctagcggggggccgaccaaag
caagcagaggtcctaaaaaattcaattcctaacaaccacaagaagactca
caaccatctgtacagcaacataaaaataaataataaataaatctttaaga
gagagagagacccagtgggcagctgcagaagttcaaggtgaaacccacag
gcatggtttgtgtctcctctggaatttccatttccactgagcagacctgg
cagagtacctgagccttcatttatctcccagcactgtggctcttgcagaa
ataaaggttgggtattgatagtcaccccacccccaccccatagctcctgt
actcccagcccacctgagttaggtgctctggtttgaggagatggaggtag
ggctcccagaacactccctgttgacagctcccctttcccatcagctgatg
aacgcggtgaacacactggacagggacgtccttaaccaactgcacgtgca
gctcatggagctaaggagctgtaaaggctacaagcagtgcaacccccgga
cccgcaacatggacctgggtgagttggcacgagtgcagcctgcagagaag
agagtgtatgtcacgtctgccccaacgatgagcccagaatcacagggaag
ggtacagagaagctgtgcttccaggagttgagaagccacacaatctatac
aggacactgacttctcttctctgtttcgctcccttttgttcattcattct
tcatgaagaacttagcctcctgagttccttgggcagcaaatgtatgggca
aggtgtggagctcctcctggccaggacccatactggaggcatctggcttg
aacggagtgagaccgggacccgcatgcaatatgctgtgatcgttagctct
gcgatagacaggggcgaccctggtgatgaatcaactgtcattgcgaggaa
acatggagcgcttgggagtgggaagggcatgatgctatccaaggtggtct
gcacagtaaagtgacctgacctggcggccaagacctgtgggccagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_165902534_165903685
seq2: B6Ng01-148B16.g_69_1216 (reverse)

seq1  TTTCTGGCCCACAGAGCCTGGCCGCCAGGTCA-GTCACTTT-CTGTTGCA  48
      ||||||||||||||  | |||||||||||||| |||||||| ||| ||||
seq2  TTTCTGGCCCACAGGTCTTGGCCGCCAGGTCAGGTCACTTTACTG-TGCA  49

seq1  G-CCACCCTGGATGGCTTCATGCCCCTCCCACTTCCCAGCGCTCCATGTT  97
      | ||||| ||||| || |||||||| ||||||| || |||||||||||||
seq2  GACCACCTTGGATAGCATCATGCCCTTCCCACTCCCAAGCGCTCCATGTT  99

seq1  TCCTCTGCAATTGACAGTTGTTTCCTCTACAGTGGTCGCCCCTGTTCTAT  147
      ||||| |||| ||||||||| ||| ||  ||| ||||||||||| |||||
seq2  TCCTC-GCAA-TGACAGTTGATTCATCACCAG-GGTCGCCCCTG-TCTAT  145

seq1  CGCAGAGCTAACGATCACAGCATATTGCATTGCGGGTCCCCGTCTCACTC  197
      ||||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  CGCAGAGCTAACGATCACAGCATATTGCA-TGCGGGTCCCGGTCTCACTC  194

seq1  CGTTCAAGCCAGATGCCTCCCAGTATGGGTCCTGGCCAGGAGGAGCTCCA  247
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CGTTCAAGCCAGATGCCT-CCAGTATGGGTCCTGGCCAGGAGGAGCTCCA  243

seq1  CACCTTGCCCATACATTTGCTGCCCAAGGAACTCAGGAGGCTAAGTTCTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGCCCATACATTTGCTGCCCAAGGAACTCAGGAGGCTAAGTTCTT  293

seq1  CATGAAGAATGAATGAACAAAAGGGAGCGAAACAGAGAAGAGAAGTCAGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGAATGAATGAACAAAAGGGAGCGAAACAGAGAAGAGAAGTCAGT  343

seq1  GTCCTGTATAGATTGTGTGGCTTCTCAACTCCTGGAAGCACAGCTTCTCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTATAGATTGTGTGGCTTCTCAACTCCTGGAAGCACAGCTTCTCT  393

seq1  GTACCCTTCCCTGTGATTCTGGGCTCATCGTTGGGGCAGACGTGACATAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCTTCCCTGTGATTCTGGGCTCATCGTTGGGGCAGACGTGACATAC  443

seq1  ACTCTCTTCTCTGCAGGCTGCACTCGTGCCAACTCACCCAGGTCCATGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTTCTCTGCAGGCTGCACTCGTGCCAACTCACCCAGGTCCATGTT  493

seq1  GCGGGTCCGGGGGTTGCACTGCTTGTAGCCTTTACAGCTCCTTAGCTCCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGTCCGGGGGTTGCACTGCTTGTAGCCTTTACAGCTCCTTAGCTCCA  543

seq1  TGAGCTGCACGTGCAGTTGGTTAAGGACGTCCCTGTCCAGTGTGTTCACC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGCACGTGCAGTTGGTTAAGGACGTCCCTGTCCAGTGTGTTCACC  593

seq1  GCGTTCATCAGCTGATGGGAAAGGGGAGCTGTCAACAGGGAGTGTTCTGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTCATCAGCTGATGGGAAAGGGGAGCTGTCAACAGGGAGTGTTCTGG  643

seq1  GAGCCCTACCTCCATCTCCTCAAACCAGAGCACCTAACTCAGGTGGGCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCTACCTCCATCTCCTCAAACCAGAGCACCTAACTCAGGTGGGCTG  693

seq1  GGAGTACAGGAGCTATGGGGTGGGGGTGGGGTGACTATCAATACCCAACC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTACAGGAGCTATGGGGTGGGGGTGGGGTGACTATCAATACCCAACC  743

seq1  TTTATTTCTGCAAGAGCCACAGTGCTGGGAGATAAATGAAGGCTCAGGTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTGCAAGAGCCACAGTGCTGGGAGATAAATGAAGGCTCAGGTA  793

seq1  CTCTGCCAGGTCTGCTCAGTGGAAATGGAAATTCCAGAGGAGACACAAAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCAGGTCTGCTCAGTGGAAATGGAAATTCCAGAGGAGACACAAAC  843

seq1  CATGCCTGTGGGTTTCACCTTGAACTTCTGCAGCTGCCCACTGGGTCTCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTGTGGGTTTCACCTTGAACTTCTGCAGCTGCCCACTGGGTCTCT  893

seq1  CTCTCTCTTAAAGATTTATTTATTATTTATTTTTATGTTGCTGTACAGAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTTAAAGATTTATTTATTATTTATTTTTATGTTGCTGTACAGAT  943

seq1  GGTTGTGAGTCTTCTTGTGGTTGTTAGGAATTGAATTTTTTAGGACCTCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGAGTCTTCTTGTGGTTGTTAGGAATTGAATTTTTTAGGACCTCT  993

seq1  GCTTGCTTTGGTCGGCCCCCCGCTAGGTCCGGCCCAAAGATCTATTTATT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTTTGGTCGGCCCCCCGCTAGGTCCGGCCCAAAGATCTATTTATT  1043

seq1  ATTCTATATAAGTACACTGTAGCTGTCTTCAGACTCGCCAGAAGAGGGCG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATATAAGTACACTGTAGCTGTCTTCAGACTCGCCAGAAGAGGGCG  1093

seq1  TCAGATCTCATTACGGTGGTTGTGAGCTACCATGTAGTTGCTGGGACTTG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCTCATTACGGTGGTTGTGAGCTACCATGTAGTTGCTGGGACTTG  1143

seq1  AATTC  1152
      |||||
seq2  AATTC  1148