BAC Information

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BAC

Clone NameB6Ng01-148D13
Chromosome2 (Build37)
Map Location 126,396,955 - 126,569,486
singlet/doubletdoublet
Overlap geneSlc27a2, Hdc, Gabpb1, Usp8, LOC100043714
Upstream geneCep152, Shc4, Eid1, 3110001I20Rik, Cops2, Galk2, Fgf7, Dtwd1, Atp8b4
Downstream geneUsp50, Trpm7, 2010106G01Rik, Ap4e1, Blvra, Ncaph, 1700041B20Rik, 1810024B03Rik, LOC100043408, Ascc3l1, Ciao1, Tmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661, Mrps5, Mal, LOC668892, Mall, Nphp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148D13.bB6Ng01-148D13.g
ACCDH944892DH944893
length1,1831,079
definitionDH944892|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D13, 5' end.DH944893|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,568,313 - 126,569,486)(126,396,955 - 126,398,038)
sequence
gaattctaggcagacgacagcctctgagctcagttttgcctgtaaactca
ctactcactaccttatggggctacctctataaataaaaaatgttggcaaa
tacttgacatgccttgagtgttttgaggtatttaaactgtatcttaagta
ggaacttcatctctctaattgtaggtgtttagaaaattctcaaacaggcg
ttgtattctgttgagctttcctcagtgttgaagtcatgggcttattgacg
ccgagtgagctgatctacaggtatgtgcagtacacctggctactctagtg
aggttagcccgtggtccctgagcattgtattaatatggtctgtaaatctg
gaaaatgtgactaaagtactgtttgaaaggtatgcattttgtaaggtagc
attttgctttccagccttcatttctgcactaccaaaactgttttctattt
acttgtatgtacgtaaaagtaagctgttagtgttcctgctgttacatagt
agtcaaaaggaaaggacactgttagctgtacaaagaaaacaaattaaaag
tatatcattccatgaacatatcttccaaaattaaggcaatcaacttttga
gtatgtagttaaggacagaaaaaagtaactgattttaagtgtacgaacag
aaacaaaatcatacagactgatcaaaaatatcattatatgtaaaataaat
gtcaggctgtcgatgttactgactgtacatcctatgtagacaaaatgacc
tccatctactggggccttatttctccattatgagattgtattttatcctc
gtcttttgatggtcacacaccaagcaagcacagaaatgcatatgactatt
tctagcaataatttaagttgtatgacattttataaacgaaagattctatg
gccaaccaatcaatttacatcatcacaggcctcaaaggaaagcagagaag
ccaataccaatggatcaggacggtctctcaccccttgagcactgtccaga
ttgcctgttctgtttggtggaaagccaactgtgtccacattctatacaca
tttaactgttcgtttaaccttacccttggcttgcattcagctctcctgac
acggaatgcaggggaacacattctgctgggcccttctgcgccctctggac
agtggaaccttttacttccaagggtaccctagc
gaattctatacccagctgtattatcaatctgttttacaataagaatattt
tcaaactgggctttgttgcacagtcctgaaatctaagctacttgggagta
aagtttaatgaatcaagagataaaaacgtaaacatttaagttagaaaggt
ggatataagaaaaactctgagttagagtgtctttctcagagctgtcagct
aagggcaaagggctgtagcagagaaatggaatgaatacagtattcttcat
tcaatttattcatttccgtgctggtttttatgctatatactcttttctct
ctctcattttcattttattcttctttcccttccttctttcctcccttact
tccttcttctttctttcttttctttagacagagcctcatgtatctggcct
caaaccagcaagttcaaggataaccttgaacttcttagccgtgtgcctct
gaaaagagtgatgtccgaagccaaattgtgtgtatttgatttttggaaca
actcttttgctatctttgtgaccctgggctcttcatcgtaagctttccaa
agctctgtttcttcatttgaaatatgtgataaatactttgtgatctgttt
tgtctagtctgtttttagaaacttcagtaaggcaatacaagtcaagggct
gacatatagacaagcccttggtggaaatattttacttactttaattttct
ggttctctgcatccttcccaggacaccctgaccttacctttgactagtca
ctaaatcccagtgggaacctaaaccccaggtgtgttgtgtgtctcgtctc
agctcctttgtagaagacaaagtagagaaatgatagaaaaaaatgaccca
caagtccattccttagggaactggtatggatgtaaagatgtaccatatcc
ccgagggaaggaagagtgtgggtgggtcacacacaactctcagctactgg
agagcaaagcaagcaaaagacaaaagtaaaaactggggcctctggagttc
cagaatctcatttgcatcaagaacattttcagcctttgaactttatcggt
tctgctaaggtaaagatccctgggctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_126568313_126569486
seq2: B6Ng01-148D13.b_44_1226 (reverse)

seq1  GCTAAGGTACCTGTGGAAGGTAAAAGGTGTCCCACGT-CAGA-GGCGCAG  48
      |||| ||||||  ||||| ||||||||| |||   || |||| |||||||
seq2  GCTAGGGTACCCTTGGAA-GTAAAAGGT-TCCACTGTCCAGAGGGCGCAG  48

seq1  AAGAGGCCAGCAG-ATGTG-TCCCCTGCA-TCCGTGTCAGGAGAGCTGAA  95
      ||| | ||||||| ||||| ||||||||| ||||||||||||||||||||
seq2  AAGGGCCCAGCAGAATGTGTTCCCCTGCATTCCGTGTCAGGAGAGCTGAA  98

seq1  TGC-AGGCAAGG--TAGGTAAAACGAACAG-TAAATGTGTATAAGATGGT  141
      ||| || |||||   |||| |||||||||| ||||||||||||  |||  
seq2  TGCAAGCCAAGGGTAAGGTTAAACGAACAGTTAAATGTGTATAGAATGTG  148

seq1  GACACAG-TGGCCTTCCA-CAAACAGAACAGGCATTCTGGACAGTGCTCA  189
      ||||||| |||| ||||| ||||||||||||||| |||||||||||||||
seq2  GACACAGTTGGCTTTCCACCAAACAGAACAGGCAATCTGGACAGTGCTCA  198

seq1  AGGGGTGAGAGACCGTCCTGATCCATTGGTATTGGCTTCTCTGCTTTCCT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGAGAGACCGTCCTGATCCATTGGTATTGGCTTCTCTGCTTTCCT  248

seq1  TTGAGGCCTGTGATGATGTAAATTGATTGGTTGGCCATAGAATCTTTCGT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCCTGTGATGATGTAAATTGATTGGTTGGCCATAGAATCTTTCGT  298

seq1  TTATAAAATGTCATACAACTTATAATTATTGCTAGAAATAGTCATATGCA  339
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTATAAAATGTCATACAACTTA-AATTATTGCTAGAAATAGTCATATGCA  347

seq1  TTTCTGTGCTTGCTTGGTGTGTGACCATCAAAAGACGAGGATAAAATACA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGCTTGCTTGGTGTGTGACCATCAAAAGACGAGGATAAAATACA  397

seq1  ATCTCATAATGGAGAAATAAGG-CCCAGTAGATGGAGGTCATTTTGTCTA  438
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATCTCATAATGGAGAAATAAGGCCCCAGTAGATGGAGGTCATTTTGTCTA  447

seq1  CATAGGATGTACAGTCAGTAACATCGACAGCCTGACATTTATTTTACATA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGATGTACAGTCAGTAACATCGACAGCCTGACATTTATTTTACATA  497

seq1  TAATGATATTTTTGATCAGTCTGTATGATTTTGTTTCTGTTCGTACACTT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATATTTTTGATCAGTCTGTATGATTTTGTTTCTGTTCGTACACTT  547

seq1  AAAATCAGTTACTTTTTTCTGTCCTTAACTACATACTCAAAAGTTGATTG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGTTACTTTTTTCTGTCCTTAACTACATACTCAAAAGTTGATTG  597

seq1  CCTTAATTTTGGAAGATATGTTCATGGAATGATATACTTTTAATTTGTTT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATTTTGGAAGATATGTTCATGGAATGATATACTTTTAATTTGTTT  647

seq1  TCTTTGTACAGCTAACAGTGTCCTTTCCTTTTGACTACTATGTAACAGCA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTACAGCTAACAGTGTCCTTTCCTTTTGACTACTATGTAACAGCA  697

seq1  GGAACACTAACAGCTTACTTTTACGTACATACAAGTAAATAGAAAACAGT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACTAACAGCTTACTTTTACGTACATACAAGTAAATAGAAAACAGT  747

seq1  TTTGGTAGTGCAGAAATGAAGGCTGGAAAGCAAAATGCTACCTTACAAAA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAGTGCAGAAATGAAGGCTGGAAAGCAAAATGCTACCTTACAAAA  797

seq1  TGCATACCTTTCAAACAGTACTTTAGTCACATTTTCCAGATTTACAGACC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACCTTTCAAACAGTACTTTAGTCACATTTTCCAGATTTACAGACC  847

seq1  ATATTAATACAATGCTCAGGGACCACGGGCTAACCTCACTAGAGTAGCCA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATACAATGCTCAGGGACCACGGGCTAACCTCACTAGAGTAGCCA  897

seq1  GGTGTACTGCACATACCTGTAGATCAGCTCACTCGGCGTCAATAAGCCCA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTACTGCACATACCTGTAGATCAGCTCACTCGGCGTCAATAAGCCCA  947

seq1  TGACTTCAACACTGAGGAAAGCTCAACAGAATACAACGCCTGTTTGAGAA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCAACACTGAGGAAAGCTCAACAGAATACAACGCCTGTTTGAGAA  997

seq1  TTTTCTAAACACCTACAATTAGAGAGATGAAGTTCCTACTTAAGATACAG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAAACACCTACAATTAGAGAGATGAAGTTCCTACTTAAGATACAG  1047

seq1  TTTAAATACCTCAAAACACTCAAGGCATGTCAAGTATTTGCCAACATTTT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATACCTCAAAACACTCAAGGCATGTCAAGTATTTGCCAACATTTT  1097

seq1  TTATTTATAGAGGTAGCCCCATAAGGTAGTGAGTAGTGAGTTTACAGGCA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATAGAGGTAGCCCCATAAGGTAGTGAGTAGTGAGTTTACAGGCA  1147

seq1  AAACTGAGCTCAGAGGCTGTCGTCTGCCTAGAATTC  1174
      ||||||||||||||||||||||||||||||||||||
seq2  AAACTGAGCTCAGAGGCTGTCGTCTGCCTAGAATTC  1183

seq1: chr2_126396955_126398038
seq2: B6Ng01-148D13.g_68_1146

seq1  GAATTCTATACCCAGCTGTATTATCAATCTGTTTTACAATAAGAATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATACCCAGCTGTATTATCAATCTGTTTTACAATAAGAATATTT  50

seq1  TCAAACTGGGCTTTGTTGCACAGTCCTGAAATCTAAGCTACTTGGGAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTGGGCTTTGTTGCACAGTCCTGAAATCTAAGCTACTTGGGAGTA  100

seq1  AAGTTTAATGAATCAAGAGATAAAAACGTAAACATTTAAGTTAGAAAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAATGAATCAAGAGATAAAAACGTAAACATTTAAGTTAGAAAGGT  150

seq1  GGATATAAGAAAAACTCTGAGTTAGAGTGTCTTTCTCAGAGCTGTCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATAAGAAAAACTCTGAGTTAGAGTGTCTTTCTCAGAGCTGTCAGCT  200

seq1  AAGGGCAAAGGGCTGTAGCAGAGAAATGGAATGAATACAGTATTCTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAAAGGGCTGTAGCAGAGAAATGGAATGAATACAGTATTCTTCAT  250

seq1  TCAATTTATTCATTTCCGTGCTGGTTTTTATGCTATATACTCTTTTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTATTCATTTCCGTGCTGGTTTTTATGCTATATACTCTTTTCTCT  300

seq1  CTCTCATTTTCATTTTATTCTTCTTTCCCTTCCTTCTTTCCTCCCTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATTTTCATTTTATTCTTCTTTCCCTTCCTTCTTTCCTCCCTTACT  350

seq1  TCCTTCTTCTTTCTTTCTTTTCTTTAGACAGAGCCTCATGTATCTGGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTTCTTTCTTTCTTTTCTTTAGACAGAGCCTCATGTATCTGGCCT  400

seq1  CAAACCAGCAAGTTCAAGGATAACCTTGAACTTCTTAGCCGTGTGCCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCAGCAAGTTCAAGGATAACCTTGAACTTCTTAGCCGTGTGCCTCT  450

seq1  GAAAAGAGTGATGTCCGAAGCCAAATTGTGTGTATTTGATTTTTGGAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGTGATGTCCGAAGCCAAATTGTGTGTATTTGATTTTTGGAACA  500

seq1  ACTCTTTTGCTATCTTTGTGACCCTGGGCTCTTCATCGTAAGCTTTCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTTGCTATCTTTGTGACCCTGGGCTCTTCATCGTAAGCTTTCCAA  550

seq1  AGCTCTGTTTCTTCATTTGAAATATGTGATAAATACTTTGTGATCTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGTTTCTTCATTTGAAATATGTGATAAATACTTTGTGATCTGTTT  600

seq1  TGTCTAGTCTG-TTTTAGAAACTTCAGTAAGGCAATACAAGTCAAGGGCT  649
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGTCTGTTTTTAGAAACTTCAGTAAGGCAATACAAGTCAAGGGCT  650

seq1  GACATATAGACAAGCCCTTGGTGGAAATATTTTACTTACTTTAATTTTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATAGACAAGCCCTTGGTGGAAATATTTTACTTACTTTAATTTTCT  700

seq1  GGTTCTCTGCATCCTTCCCAGGACACCCTGACCTTACCTTTGACTAGTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCTGCATCCTTCCCAGGACACCCTGACCTTACCTTTGACTAGTCA  750

seq1  CTAAATCCCAGTGGGAACCTAAACCCCAGGTGTGTTGTGTGTCTCGTCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCCCAGTGGGAACCTAAACCCCAGGTGTGTTGTGTGTCTCGTCTC  800

seq1  AGCTCCTTTGTAGAAGACAAAGTAGAGAAATGATAGAAAAAAATGACCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTTGTAGAAGACAAAGTAGAGAAATGATAGAAAAAAATGACCCA  850

seq1  CAAGTCCATTCCTTAGGGAACTGGTATGGATGGTAAAGATGTACCATATC  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CAAGTCCATTCCTTAGGGAACTGGTATGGAT-GTAAAGATGTACCATATC  899

seq1  CCCGAGGGAAGGAAGAGTGTGGGTGGGTCACACACCACTCTCAGCTACTG  949
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCCGAGGGAAGGAAGAGTGTGGGTGGGTCACACACAACTCTCAGCTACTG  949

seq1  GAGAGCAAAAGCAAGCAAAAGACAAAAGTAAAAACT-GGGCCTCTTGGAA  998
      |||||| ||||||||||||||||||||||||||||| ||||||||  | |
seq2  GAGAGC-AAAGCAAGCAAAAGACAAAAGTAAAAACTGGGGCCTCT--GGA  996

seq1  GTTCCCAGATCTCATTTGCATCAAGAACATTTCCAGCCTTTGAACCTTAA  1048
      |||||   |||||||||||||||||||||||| ||||||||||| ||| |
seq2  GTTCCAGAATCTCATTTGCATCAAGAACATTTTCAGCCTTTGAA-CTTTA  1045

seq1  TCTGTTCTGCTAAGGTAATAAGATCCCTGGGCTGTA  1084
      || ||||||||||||||  |||||||||||||||||
seq2  TCGGTTCTGCTAAGGTA--AAGATCCCTGGGCTGTA  1079