BAC Information

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BAC

Clone NameB6Ng01-148F16
Chromosome2 (Build37)
Map Location 51,734,386 - 51,855,583
singlet/doubletdoublet
Overlap geneRbm43, LOC100041634, Nmi
Upstream geneLOC227885, Rnd3, LOC666802, LOC666810, LOC100041614, Tas2r134, LOC433426, Ppia-ps2_635.1
Downstream geneTnfaip6, Rif1, Neb, LOC100041670, Arl5a, Cacnb4, OTTMUSG00000012638, Stam2, Fmnl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148F16.bB6Ng01-148F16.g
ACCDH944990DH944991
length1,147754
definitionDH944990|Mus musculus domesticus DNA, BAC clone: B6Ng01-148F16, 5' end.DH944991|Mus musculus domesticus DNA, BAC clone: B6Ng01-148F16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,734,386 - 51,735,523)(51,855,036 - 51,855,583)
sequence
gaattctcttaggggctctgtgctatacagtcatgtaaagtctctgaact
caacacttatgatagaacatttaattccagcactccagagacagagccag
gtgggggtttctgtgagatcaaagccagcctggtctacacagtgagttct
aggacaaccaggattatttagagagatgctatatccataaaaaatgggaa
ttttattttgtaattttatgccacagggttgttttaagctaatagaatta
gaaactctgaaagcaaaaacagaaatggattgtcatgatattagtatcat
taggtctttctgaaaacctgcgtggatgtgttttaacaaaagtacagtgt
gtcagggtctgggagaccagtgtgcccatggtaacctcacaagagtcagg
ctcaagaaggatgacaacgctgtcctcaggagtcccagtatatacgttta
tgagtgattgatcggtgtgtgcaaagacaagaaaccgtggcttcctgatt
ccagatgtttacagtctgagactgctcagcaatcaccaggtttccatcga
tttatcaatcaatttctctcccattttcttgtcacccaagcaataaacaa
tgttgtttattgttaaaaaacaatattattgtagtagatattaaaagagt
ttagagcttgacaaggggcctgaatatgtcctctcccatctttcacccag
agaacacacttgttttctgtgccttcacacctaacacgtctcctgtgctg
gagatgattcggagaaagcatgagagacagagaaccaactggcctaaacc
agggtctgaatgagtccctctcttgttgtgtagccgtaaatcaatgaccc
tcgctatttccatccatttatccataaaattaaactggttaccatgagct
tattttgaccataatgttgaaaatacataatgaaagtcataatataaaaa
gtatatataaaactcatcagaaacataaatattttcttaataaatgttaa
tactttggcctcagcatgggatcaggttatcacggttctcttctgctggc
aactgttaccttcaatacctagcctcattcggaacttagtctctgggggt
gaatgcacaatcacgtctcagctaccctcacctggaacgcccatgtc
gaattcactgttgaatgcacaacttccatttttaaactccaactagctta
ttgtcttagtcagggtttctattcctgcacaaacatcatgaccaagaagc
aagttggggaggaaagggtttattcggcttacacttccatactgctgttc
atcaccaaggaagtcaggactggaactcaagcaggtcaggaagcaggagc
tgatgcagaggccatggagggatgttctttactggctttcctcacctggc
ttgctcagcctgctttcttatagaaccaagactaccagccctgagatggt
cccacccacaaggggcctttcccccttgatcactaattgagaaaatgcct
tacagttgtatctcatggaggcatttcctcaactgaagctcctttctctg
tgataactccagctgtgtcaagttgacacaaaactagccagtacacttat
tctttatagatttattttttcatatatatatttgatttttttcattcagg
gtttctctgtgtagccctgcctctcttagattttgttctgttaaccaggc
tggtctcaaaatcacagagatccgactatttctgcctcccaaggtgctag
aaattaaaggcatgcgccaccactagccagtgcatttgtatattttcata
tacagggatatgcacgcacattacatgttccgttcaaaactattttttat
ctttacattttttgtatttgtttggggtatgcgcccacagtacatgtggg
acgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_51734386_51735523
seq2: B6Ng01-148F16.b_45_1191

seq1  GAATTCTCTTAGGGGCTCTGTGCTATACAGTCATGTAAAGTCTCTGAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAGGGGCTCTGTGCTATACAGTCATGTAAAGTCTCTGAACT  50

seq1  CAACACTTATGATAGAACATTTAATTCCAGCACTCCAGAGACAGAGCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTTATGATAGAACATTTAATTCCAGCACTCCAGAGACAGAGCCAG  100

seq1  GTGGGGGTTTCTGTGAGATCAAAGCCAGCCTGGTCTACACAGTGAGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGTTTCTGTGAGATCAAAGCCAGCCTGGTCTACACAGTGAGTTCT  150

seq1  AGGACAACCAGGATTATTTAGAGAGATGCTATATCCATAAAAAATGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAACCAGGATTATTTAGAGAGATGCTATATCCATAAAAAATGGGAA  200

seq1  TTTTATTTTGTAATTTTATGCCACAGGGTTGTTTTAAGCTAATAGAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTGTAATTTTATGCCACAGGGTTGTTTTAAGCTAATAGAATTA  250

seq1  GAAACTCTGAAAGCAAAAACAGAAATGGATTGTCATGATATTAGTATCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCTGAAAGCAAAAACAGAAATGGATTGTCATGATATTAGTATCAT  300

seq1  TAGGTCTTTCTGAAAACCTGCGTGGATGTGTTTTAACAAAAGTACAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTTTCTGAAAACCTGCGTGGATGTGTTTTAACAAAAGTACAGTGT  350

seq1  GTCAGGGTCTGGGAGACCAGTGTGCCCATGGTAACCTCACAAGAGTCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGTCTGGGAGACCAGTGTGCCCATGGTAACCTCACAAGAGTCAGG  400

seq1  CTCAAGAAGGATGACAACGCTGTCCTCAGGAGTCCCAGTATATACGTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAAGGATGACAACGCTGTCCTCAGGAGTCCCAGTATATACGTTTA  450

seq1  TGAGTGATTGATCGGTGTGTGCAAAGACAAGAAACCGTGGCTTCCTGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGATTGATCGGTGTGTGCAAAGACAAGAAACCGTGGCTTCCTGATT  500

seq1  CCAGATGTTTACAGTCTGAGACTGCTCAGCAATCACCAGGTTTCCATCGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGTTTACAGTCTGAGACTGCTCAGCAATCACCAGGTTTCCATCGA  550

seq1  TTTATCAATCAATTTCTCTCCCATTTTCTTGTCACCCAAGCAATAAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAATCAATTTCTCTCCCATTTTCTTGTCACCCAAGCAATAAACAA  600

seq1  TGTTGTTTATTGTTAAAAAACAATATTATTGTAGTAGATATTAAAAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTTATTGTTAAAAAACAATATTATTGTAGTAGATATTAAAAGAGT  650

seq1  TTAGAGCTTGACAAGGGGCCTGAATATGTCCTCTCCCATC-TTCACCCAG  699
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTAGAGCTTGACAAGGGGCCTGAATATGTCCTCTCCCATCTTTCACCCAG  700

seq1  AGAACACACTTGTTTTCTGTGCCTTCACACCTAACACGTCTCCTGTGCTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACACTTGTTTTCTGTGCCTTCACACCTAACACGTCTCCTGTGCTG  750

seq1  GAGATGATTCGGAGAAAGCATGAGAGACAGAGAACCAACTGGCCTAAACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGATTCGGAGAAAGCATGAGAGACAGAGAACCAACTGGCCTAAACC  800

seq1  AGGGTCTGAATGAGTCCCTCTCTTGTTGTGTAGCCGTAAATCAATGACCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTGAATGAGTCCCTCTCTTGTTGTGTAGCCGTAAATCAATGACCC  850

seq1  TCGCTATTTCCATCCATTTATCCATAAAATTAAACT-GTTACCATGAGCT  898
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCGCTATTTCCATCCATTTATCCATAAAATTAAACTGGTTACCATGAGCT  900

seq1  TATTTTGACCATAATG-TGAAAATACAT-ATGAAAGTCATAATATAAAAA  946
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  TATTTTGACCATAATGTTGAAAATACATAATGAAAGTCATAATATAAAAA  950

seq1  GTATATATAAAACTCATCAGAAACAT-AATATTTTCTTAATAAATGTTAA  995
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTATATATAAAACTCATCAGAAACATAAATATTTTCTTAATAAATGTTAA  1000

seq1  TACTTT-GCCTCAGCATGGGATCAGGTGATCAC-GTTCTCTTCTGCTGGC  1043
      |||||| |||||||||||||||||||| ||||| ||||||||||||||||
seq2  TACTTTGGCCTCAGCATGGGATCAGGTTATCACGGTTCTCTTCTGCTGGC  1050

seq1  AACTGTTACCTTCAGATA-CTAGCCTCATTCTGAACTTAGTCTCT-GTGG  1091
      |||||||||||||| ||| |||||||||||| ||||||||||||| | ||
seq2  AACTGTTACCTTCA-ATACCTAGCCTCATTCGGAACTTAGTCTCTGGGGG  1099

seq1  TG-ATGCACCAATCACGTCTCAGCTACCCTCACCTGG-ACGCCCTTGTC  1138
      || ||||| |||||||||||||||||||||||||||| |||||| ||||
seq2  TGAATGCA-CAATCACGTCTCAGCTACCCTCACCTGGAACGCCCATGTC  1147

seq1: chr2_51855036_51855583
seq2: B6Ng01-148F16.g_70_617 (reverse)

seq1  CTGGTTAACAGAACAAAATCTAAGAGAGGCAGGGCTACACAGAGAAACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTAACAGAACAAAATCTAAGAGAGGCAGGGCTACACAGAGAAACCC  50

seq1  TGAATGAAAAAAATCAAATATATATATGAAAAAATAAATCTATAAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAAAAAAATCAAATATATATATGAAAAAATAAATCTATAAAGAAT  100

seq1  AAGTGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATCACA  150

seq1  GAGAAAGGAGCTTCAGTTGAGGAAATGCCTCCATGAGATACAACTGTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGGAGCTTCAGTTGAGGAAATGCCTCCATGAGATACAACTGTAAG  200

seq1  GCATTTTCTCAATTAGTGATCAAGGGGGAAAGGCCCCTTGTGGGTGGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTCTCAATTAGTGATCAAGGGGGAAAGGCCCCTTGTGGGTGGGAC  250

seq1  CATCTCAGGGCTGGTAGTCTTGGTTCTATAAGAAAGCAGGCTGAGCAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGGGCTGGTAGTCTTGGTTCTATAAGAAAGCAGGCTGAGCAAGC  300

seq1  CAGGTGAGGAAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAGGAAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGC  350

seq1  TCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA  400

seq1  ACAGCAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAACTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAACTTGC  450

seq1  TTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACAATA  500

seq1  AGCTAGTTGGAGTTTAAAAATGGAAGTTGTGCATTCAACAGTGAATTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGTTGGAGTTTAAAAATGGAAGTTGTGCATTCAACAGTGAATTC  548