BAC Information

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BAC

Clone NameB6Ng01-148I22
Chromosome2 (Build37)
Map Location 97,186,969 - 97,318,147
singlet/doubletdoublet
Overlap geneLrrc4c
Upstream geneLOC100043267
Downstream geneLOC621146, LOC664974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148I22.bB6Ng01-148I22.g
ACCDH945125DH945126
length1,1061,082
definitionDH945125|Mus musculus domesticus DNA, BAC clone: B6Ng01-148I22, 5' end.DH945126|Mus musculus domesticus DNA, BAC clone: B6Ng01-148I22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,186,969 - 97,188,076)(97,317,057 - 97,318,147)
sequence
gaattcctagccctccccttactgatttctcctcaagctctatgattttc
attcttctctacttcatttcaatgtactctacctttgctgtcttctgact
cctgtcttgccttctgctaacattttaagaaaaaaaaattaacaaacaaa
ttttgtctctgattcagtctttcttaaagccattctgaatcccactcata
ctgctgcatgtctgtacagaaacatactttcgtttacatcccctaagtca
tccaaagaacatgcaatcaagtcctgagaaagcccttcttaaagacagtt
tcatatgggagacagaaagcagagttctgatctgatctggttctgatggt
ttgtgacaggtattgtgtagctttcattcaatggtcattgctcctgtctt
tttcatcagctgtgaaatccaacttaaactctgcttatgatgtctctctt
tgggttttgctatctactcgaggttcagagttagagttcacatattttga
aatttaatgttctatttttgtatatggacacatactttcttcctttcctc
cagtgaactattatataggtgctttgctgtcttttttttttcaggctctt
acactgtatattaaattatccattacaaaaagaagtggagctgaaagatt
tgtagtgcaatcaaaacagagcttattcttaatgtgtcaatattcatttc
cactttctcataaatctcctacttctcttacaaaatctatttttcttacc
tggatattttaaagaaaaaatgctattaaatcaagtacctaaatcttacc
taaactgatttgtaatggaatcatttagttccagacaagcatcaaacacg
gcatattatctgagaggtagcaaggcatccatctcctttatagattgaag
ccttcacttcttccagggctcatctcattctattgaacggactgtatgta
gcagttaggagggctgtgagagagtctaaggatatttgggttattttttt
ttctaagacatgtctctctcacaaagcttatatgctttatatgggtcttt
cttctgttttatgacttgtgccacacatacacacaatactaatggtgtag
agtcag
gaattctttacgcttccaaaggtcccaaagctttcttagaatctttgtct
taattactgaaatctacacctcagtaccaagctatcattaaacaacacac
atcctttgtcatgagaataaatgtcttaatattttacagtgggttcttga
tttagtaaccaaaacatgcaaataaacatatgcattcataataagatctc
aatcaaaatggcttaggctatatgtacaggaatagatgaggctaataatt
atgaaagtatattagttgtccaaagacagatgatcttcccattctaaatc
tgtgaacccttatgcaataccatatccactttaataattgctttcccttt
gcatttcttattattacttcttcaagatcggtgagattgaacagatgagc
tactctcaaggaaacagtgtgctcctggcaactttagtttggcaagaagg
aatcaccagattcagcactgactctcccaagtaagtcctccctggcacct
tcccattctcagctcctcaggcattatctcgttagctagtagagaatatg
cagctgtattggaaatcttgagataaaaaacttgttcataagatgaaaag
gaaaagtgagatgttctaaacactgtaaaaatcactatcaacgtactttt
atctactaaaaaaattacgactattcctaatttctaagtagaagatatct
aaaatgagtagaaaacatttcagtgaatatttaacaaaacattaatattt
caaatagtcaagacattcattactaaagattgaagaataaaattcaaaca
taactcagtttgatcttcccttagcattatccttcacctaaattagttta
ttctgttggttttttgttttatgtatttctggtgttgtttgttgttgttt
gtttggagttgtttttgcagaaaggagaagacatcattcaaagcataaga
tcaaaacactgggttcagtaaagctgttcttgatataatgtgaaaagcag
ctacactttgataggagaagacctcagcctttacacctctgagatctctt
ggcaagattggtattcagggatcttcatgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_97186969_97188076
seq2: B6Ng01-148I22.b_43_1148

seq1  GAATTCCTAGCCCTCCCCTTACTGATTTCTCCTCAAGCTCTATGATTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGCCCTCCCCTTACTGATTTCTCCTCAAGCTCTATGATTTTC  50

seq1  ATTCTTCTCTACTTCATTTCAATGTACTCTACCTTTGCTGTCTTCTGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTCTACTTCATTTCAATGTACTCTACCTTTGCTGTCTTCTGACT  100

seq1  CCTGTCTTGCCTTCTGCTAACATTTTAAGAAAAAAAAATTAACAAACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTTGCCTTCTGCTAACATTTTAAGAAAAAAAAATTAACAAACAAA  150

seq1  TTTTGTCTCTGATTCAGTCTTTCTTAAAGCCATTCTGAATCCCACTCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTCTGATTCAGTCTTTCTTAAAGCCATTCTGAATCCCACTCATA  200

seq1  CTGCTGCATGTCTGTACAGAAACATACTTTCGTTTACATCCCCTAAGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCATGTCTGTACAGAAACATACTTTCGTTTACATCCCCTAAGTCA  250

seq1  TCCAAAGAACATGCAATCAAGTCCTGAGAAAGCCCTTCTTAAAGACAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGAACATGCAATCAAGTCCTGAGAAAGCCCTTCTTAAAGACAGTT  300

seq1  TCATATGGGAGACAGAAAGCAGAGTTCTGATCTGATCTGGTTCTGATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATGGGAGACAGAAAGCAGAGTTCTGATCTGATCTGGTTCTGATGGT  350

seq1  TTGTGACAGGTATTGTGTAGCTTTCATTCAATGGTCATTGCTCCTGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACAGGTATTGTGTAGCTTTCATTCAATGGTCATTGCTCCTGTCTT  400

seq1  TTTCATCAGCTGTGAAATCCAACTTAAACTCTGCTTATGATGTCTCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCAGCTGTGAAATCCAACTTAAACTCTGCTTATGATGTCTCTCTT  450

seq1  TGGGTTTTGCTATCTACTCGAGGTTCAGAGTTAGAGTTCACATATTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTGCTATCTACTCGAGGTTCAGAGTTAGAGTTCACATATTTTGA  500

seq1  AATTTAATGTTCTATTTTTGTATATGGACACATACTTTCTTCCTTTCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAATGTTCTATTTTTGTATATGGACACATACTTTCTTCCTTTCCTC  550

seq1  CAGTGAACTATTATATAGGTGCTTTGCTGTCTTTTTTTTTTCAGGCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAACTATTATATAGGTGCTTTGCTGTCTTTTTTTTTTCAGGCTCTT  600

seq1  ACACTGTATATTAAATTATCCATTACAAAAAGAAGTGGAGCTGAAAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTATATTAAATTATCCATTACAAAAAGAAGTGGAGCTGAAAGATT  650

seq1  TGTAGTGCAATCAAAACAGAGCTTATTCTTAATGTGTCAATATTCATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGCAATCAAAACAGAGCTTATTCTTAATGTGTCAATATTCATTTC  700

seq1  CACTTTCTCATAAATCTCCTACTTCTCTTACAAAATCTATTTTTCTTACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTCATAAATCTCCTACTTCTCTTACAAAATCTATTTTTCTTACC  750

seq1  TGGATATTTTAAAGAAAAAATGCTATTAAATCAAGTACCTAAATCTTACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATTTTAAAGAAAAAATGCTATTAAATCAAGTACCTAAATCTTACC  800

seq1  TAAACTGATTTGTAATGGAATCATTTAGTTCCAGACAAGCATCAAACACG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGATTTGTAATGGAATCATTTAGTTCCAGACAAGCATCAAACACG  850

seq1  GCATATTATCTGAGAGGTAGCAAGGCATCCATCTCCTTTATAGATTGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTATCTGAGAGGTAGCAAGGCATCCATCTCCTTTATAGATTGAAG  900

seq1  CCTTCACTTCTTCCAGGGCTCATCCCATTCTATTGAACGGACTGTATGTA  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCTTCACTTCTTCCAGGGCTCATCTCATTCTATTGAACGGACTGTATGTA  950

seq1  GCAGTTAGGAGGGCTGTGAGAAGAGTCTAAGGGATATTTGGGTTA-TTTT  999
      |||||||||||||||||||| ||||||||| |||||||||||||| ||||
seq2  GCAGTTAGGAGGGCTGTGAG-AGAGTCTAA-GGATATTTGGGTTATTTTT  998

seq1  TTTTCTAAGACATGTCTCTCTCACAAAGC-TATATGCTTTATAATGTGTC  1048
      ||||||||||||||||||||||||||||| |||||||||||| ||| |||
seq2  TTTTCTAAGACATGTCTCTCTCACAAAGCTTATATGCTTTAT-ATGGGTC  1047

seq1  TTTCTTCTGTTTTTAATGACTTGTG-CACACATACACACAAATACTAAT-  1096
      |||||||||||||  |||||||||| ||||||||||||| ||||||||| 
seq2  TTTCTTCTGTTTT--ATGACTTGTGCCACACATACACAC-AATACTAATG  1094

seq1  GTGTAGAGTCAG  1108
      ||||||||||||
seq2  GTGTAGAGTCAG  1106

seq1: chr2_97317057_97318147
seq2: B6Ng01-148I22.g_68_1149 (reverse)

seq1  GAGCATGGAGATTACCTGAATACAAACTCTTGCAAAGAGA-ATCAG-GGT  48
      ||||||| ||| | ||||||||| || |||||| ||||||  |||| |||
seq2  GAGCATGAAGA-TCCCTGAATACCAA-TCTTGCCAAGAGATCTCAGAGGT  48

seq1  GTAAGGGCTGAGGTTCTTCTTCCTATCAAAGTGTAGCTGCTTTTCACATT  98
      |||| |||||||| ||||| ||||||||||||||||||||||||||||||
seq2  GTAAAGGCTGAGG-TCTTC-TCCTATCAAAGTGTAGCTGCTTTTCACATT  96

seq1  ATATCAAGAACAGCTTTTACTGAACCCAGTTGTTTTGATCTTATGCTTTG  148
      |||||||||||||| |||||||||||||| ||||||||||||||||||||
seq2  ATATCAAGAACAGC-TTTACTGAACCCAG-TGTTTTGATCTTATGCTTTG  144

seq1  AAATGATGTCTTCTCCTTTCTTGCAAAAACAACTCCAAACAAACAAACAA  198
       ||||||||||||||||||| |||||||||||||||||||||||||   |
seq2  -AATGATGTCTTCTCCTTTC-TGCAAAAACAACTCCAAACAAACAA--CA  190

seq1  ACAAACAACACCAGAAATAACATAAAACAAAAAACCAACAGAATAAACTA  248
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACAAACAACACCAGAAAT-ACATAAAACAAAAAACCAACAGAATAAACTA  239

seq1  ATTTAGGTGAAGGATAATGCTAAGGGAAGATCAAACTGAGTTATGTTTGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGTGAAGGATAATGCTAAGGGAAGATCAAACTGAGTTATGTTTGA  289

seq1  ATTTTATTCTTCAATCTTTAGTAATGAATGTCTTGACTATTTGAAATATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTCTTCAATCTTTAGTAATGAATGTCTTGACTATTTGAAATATT  339

seq1  AATGTTTTGTTAAATATTCACTGAAATGTTTTCTACTCATTTTAGATATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTGTTAAATATTCACTGAAATGTTTTCTACTCATTTTAGATATC  389

seq1  TTCTACTTAGAAATTAGGAATAGTCGTAATTTTTTTAGTAGATAAAAGTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTAGAAATTAGGAATAGTCGTAATTTTTTTAGTAGATAAAAGTA  439

seq1  CGTTGATAGTGATTTTTACAGTGTTTAGAACATCTCACTTTTCCTTTTCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGATAGTGATTTTTACAGTGTTTAGAACATCTCACTTTTCCTTTTCA  489

seq1  TCTTATGAACAAGTTTTTTATCTCAAGATTTCCAATACAGCTGCATATTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGAACAAGTTTTTTATCTCAAGATTTCCAATACAGCTGCATATTC  539

seq1  TCTACTAGCTAACGAGATAATGCCTGAGGAGCTGAGAATGGGAAGGTGCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTAGCTAACGAGATAATGCCTGAGGAGCTGAGAATGGGAAGGTGCC  589

seq1  AGGGAGGACTTACTTGGGAGAGTCAGTGCTGAATCTGGTGATTCCTTCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGACTTACTTGGGAGAGTCAGTGCTGAATCTGGTGATTCCTTCTT  639

seq1  GCCAAACTAAAGTTGCCAGGAGCACACTGTTTCCTTGAGAGTAGCTCATC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAACTAAAGTTGCCAGGAGCACACTGTTTCCTTGAGAGTAGCTCATC  689

seq1  TGTTCAATCTCACCGATCTTGAAGAAGTAATAATAAGAAATGCAAAGGGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAATCTCACCGATCTTGAAGAAGTAATAATAAGAAATGCAAAGGGA  739

seq1  AAGCAATTATTAAAGTGGATATGGTATTGCATAAGGGTTCACAGATTTAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATTATTAAAGTGGATATGGTATTGCATAAGGGTTCACAGATTTAG  789

seq1  AATGGGAAGATCATCTGTCTTTGGACAACTAATATACTTTCATAATTATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAAGATCATCTGTCTTTGGACAACTAATATACTTTCATAATTATT  839

seq1  AGCCTCATCTATTCCTGTACATATAGCCTAAGCCATTTTGATTGAGATCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCATCTATTCCTGTACATATAGCCTAAGCCATTTTGATTGAGATCT  889

seq1  TATTATGAATGCATATGTTTATTTGCATGTTTTGGTTACTAAATCAAGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGAATGCATATGTTTATTTGCATGTTTTGGTTACTAAATCAAGAA  939

seq1  CCCACTGTAAAATATTAAGACATTTATTCTCATGACAAAGGATGTGTGTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGTAAAATATTAAGACATTTATTCTCATGACAAAGGATGTGTGTT  989

seq1  GTTTAATGATAGCTTGGTACTGAGGTGTAGATTTCAGTAATTAAGACAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATGATAGCTTGGTACTGAGGTGTAGATTTCAGTAATTAAGACAAA  1039

seq1  GATTCTAAGAAAGCTTTGGGACCTTTGGAAGCGTAAAGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTAAGAAAGCTTTGGGACCTTTGGAAGCGTAAAGAATTC  1082