BAC Information

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BAC

Clone NameB6Ng01-148J14
Chromosome2 (Build37)
Map Location 130,072,412 - 130,196,924
singlet/doubletdoublet
Overlap geneTmc2, Nol5a, Idh3b, Ebf4
Upstream geneLOC671466, Ckap2l, Il1a, Il1b, OTTMUSG00000015529, LOC668896, F830045P16Rik, Sirpa, Pdyn, Ppia-ps2_1620.1, Stk35, Tgm3, AU015228, LOC100043438, Tgm6, Snrpb
Downstream geneLOC668899, Cpxm1, LOC100043446, 1700020A23Rik, 4933425O20Rik, A930025D01Rik, Vps16, Ptpra, Mrps26, Oxt, Avp, 1700012O15Rik, Ubox5, Fastkd5, Prosapip1, 2600009E05Rik, Itpa, Slc4a11, 4930402H24Rik, LOC100043766, C030014O09Rik, LOC627316, Atrn, LOC100043768, Gfra4, Adam33, Siglec1, LOC100043457, Hspa12b, 1700037H04Rik, Spef1, Cenpb, Cdc25b, 2310035K24Rik, D430028G21Rik, Pank2, Rnf24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148J14.bB6Ng01-148J14.g
ACCDH945157DH945158
length881132
definitionDH945157|Mus musculus domesticus DNA, BAC clone: B6Ng01-148J14, 5' end.DH945158|Mus musculus domesticus DNA, BAC clone: B6Ng01-148J14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,196,042 - 130,196,924)(130,072,412 - 130,072,543)
sequence
gaattctagatgctgcccaagcacaccagagaaagaagtggaggcctctg
aggacaaagcagcccacccactgtggcaaggatgttctcccagaaggctg
cagggcttgagtgtgggggttgataaagacagggtttccaaatgcccaaa
tccaagggcattggactccctggatggtggattctttaaaaacaaaacaa
aacaaaacaaaacaaaaacccaggtttcagaaagagaaaatctgacttta
cccagggtccaagggtctgggagtcttctagggctctagatgggtgaata
ggccaaaggcttttttttttttttttttttttttttaaactattctcctt
ttaaacaggtaaagccaaaaggaatctggttcttgggaggaggcaagagg
gggttggagtgtgattcaaagcggcatcctgggacccatggccctacaca
tctagtttagatttaacctgttttgcctgagttcccataaatgtccagca
acccttatcttgggggtggccagacaatcaggataccaagttctaagttc
ctgctcatgcctcagctggcactgttgggactgaatccatgccgaaggaa
caaagcagaggctaattcctaagctgagacacaaagttgcccaggggcat
gggtcaaagtggccctcagagatctatggagcctctaagaaaagcagaca
aaagaagcaggcacaagaggccacgtggccacctgcatctgggtttatgt
tccattttgtccaaactcatcagagtgtgaggccaccaaggcatgggcca
ggctgttctttggggccagcttaagctgggtgtgtggtggtagggggacc
aattctgaaacatctattggggtcagagtca
ctttccaaaacagagagtcaggcttcagcctgaagaggtagatacaattt
caggttgttgttgtcgtcatcgttgtcctcaaaagcttcaggttttttgt
ttgttttttgttttggggggggttttgttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_130196042_130196924
seq2: B6Ng01-148J14.b_45_925 (reverse)

seq1  TGACTCTGACCCCAATAGATGTTTCATGAAATTTGTCCCCCTACCACCAC  50
      ||||||||||||||||||||||||||   |||| ||||||||||||||||
seq2  TGACTCTGACCCCAATAGATGTTTCA--GAATTGGTCCCCCTACCACCAC  48

seq1  ACACCCAGCTCTAGCTGGCCCCAAAGAACAGCCTGG-CCATGCCTTGGTG  99
      ||||||||||  |||||||||||||||||||||||| |||||||||||||
seq2  ACACCCAGCTTAAGCTGGCCCCAAAGAACAGCCTGGCCCATGCCTTGGTG  98

seq1  GCCTCACACTCTGATGAGTTTGGACAAAATGGAACAATAAAACCAGATGC  149
      ||||||||||||||||||||||||||||||||||| ||||| ||||||||
seq2  GCCTCACACTCTGATGAGTTTGGACAAAATGGAAC-ATAAACCCAGATGC  147

seq1  AGGTGGCCACGTGGCCTCTTGTGCCTGCTTCTTTTGTCTGCTTTTCTTAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGCCACGTGGCCTCTTGTGCCTGCTTCTTTTGTCTGCTTTTCTTAG  197

seq1  AGGCTCCATAGATCTCTGAGGGCCACTTTGACCCATGCCCCTGGGCAACT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCATAGATCTCTGAGGGCCACTTTGACCCATGCCCCTGGGCAACT  247

seq1  TTGTGTCTCAGCTTAGGAATTAGCCTCTGCTTTGTTCCTTCGGCATGGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTCAGCTTAGGAATTAGCCTCTGCTTTGTTCCTTCGGCATGGAT  297

seq1  TCAGTCCCAACAGTGCCAGCTGAGGCATGAGCAGGAACTTAGAACTTGGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCCAACAGTGCCAGCTGAGGCATGAGCAGGAACTTAGAACTTGGT  347

seq1  ATCCTGATTGTCTGGCCACCCCCAAGATAAGGGTTGCTGGACATTTATGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGATTGTCTGGCCACCCCCAAGATAAGGGTTGCTGGACATTTATGG  397

seq1  GAACTCAGGCAAAACAGGTTAAATCTAAACTAGATGTGTAGGGCCATGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGGCAAAACAGGTTAAATCTAAACTAGATGTGTAGGGCCATGGG  447

seq1  TCCCAGGATGCCGCTCTGAATCACACTCCAACCCCCTCTTGCCTCCTCCC  499
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCCCAGGATGCCGCTTTGAATCACACTCCAACCCCCTCTTGCCTCCTCCC  497

seq1  AAGAACCAGATTCCTTTTGGCTTTACCTGTTTAAAAGGAGAATAGTTTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCAGATTCCTTTTGGCTTTACCTGTTTAAAAGGAGAATAGTTTAA  547

seq1  AAAAAAAAAAAAAAAAAAAAAAAAGCCTTTGGCCTATTCACCCATCTAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAAAAGCCTTTGGCCTATTCACCCATCTAGA  597

seq1  GCCCTAGAAGACTCCCAGACCCTTGGACCCTGGGTAAAGTCAGATTTTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTAGAAGACTCCCAGACCCTTGGACCCTGGGTAAAGTCAGATTTTCT  647

seq1  CTTTCTGAAACCTGGGTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGAAACCTGGGTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTAAA  697

seq1  GAATCCACCATCCAGGGAGTCCAATGCCCTTGGATTTGGGCATTTGGAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCACCATCCAGGGAGTCCAATGCCCTTGGATTTGGGCATTTGGAAA  747

seq1  CCCTGTCTTTATCAACCCCCACACTCAAGCCCTGCAGCCTTCTGGGAGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTTTATCAACCCCCACACTCAAGCCCTGCAGCCTTCTGGGAGAA  797

seq1  CATCCTTGCCACAGTGGGTGGGCTGCTTTGTCCTCAGAGGCCTCCACTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTGCCACAGTGGGTGGGCTGCTTTGTCCTCAGAGGCCTCCACTTC  847

seq1  TTTCTCTGGTGTGCTTGGGCAGCATCTAGAATTC  883
      ||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGGTGTGCTTGGGCAGCATCTAGAATTC  881

seq1: chr2_130072412_130072543
seq2: B6Ng01-148J14.g_74_205

seq1  CTTTCCAAAACAGAGAGTCAGGCTTCAGCCTGAAGAGGTAGATACAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAAAACAGAGAGTCAGGCTTCAGCCTGAAGAGGTAGATACAATTT  50

seq1  CAGGTTGTTGTTGTCGTCATCGTTGTCCTCAAAAGCTTCAGGTTTTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGTTGTTGTCGTCATCGTTGTCCTCAAAAGCTTCAGGTTTTTTGT  100

seq1  TTGTTTTTTGTTTTGGGGGGGGTTTTGTTTTG  132
      ||||||||||||||||||||||||||||||||
seq2  TTGTTTTTTGTTTTGGGGGGGGTTTTGTTTTG  132