BAC Information

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BAC

Clone NameB6Ng01-148M14
Chromosome2 (Build37)
Map Location 15,517,810 - 15,617,312
singlet/doubletdoublet
Overlap genenone
Upstream geneCacnb2, LOC100041164, LOC625335, LOC625342, LOC100041220, Nsun6, Arl5b, LOC633061, LOC667329, LOC227588
Downstream geneLOC625457, Plxdc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148M14.bB6Ng01-148M14.g
ACCDH945299DH945300
length1,1761,135
definitionDH945299|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M14, 5' end.DH945300|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,616,102 - 15,617,312)(15,517,810 - 15,518,963)
sequence
gaattctacaatacagtgagagcccttctgtctcttaatgcaatgccaag
tgtgttcatgtccattaaagttgcacaacaataaaaagtcaatatcaata
ctaaaatttgcttttgtatttatacctgcatttggatgatgtcaacactc
aatttttaatttcagttaatgaaggcaaaatggtctcaattccagtcata
ttacccataaagaaatcatttcttgcaggcaactcagctgactgtcagta
ttgtcctatcatgttgtgatcttcacacacagattcccaggtctaaccca
gcagtctataggtgtgtgtaaaacatctttaggggcttaccttgagctgt
accatgagtgtgatctctaggtggagcttgttgttctaaatcagcagaaa
gattactttgggagctccacacccagtcaaaatggtcaccaccactggct
tcaaaccacccacagctgtttgcttcaaagtcacaatcagcaactaaaga
agagaaatgagactcttagatttccagagtcccctgctttaggaatgtag
cactcaagtggatatagcctcacaggtacaaaaagtcacagaaggaaaat
taagatcattctaggactgaaaatgggacatgcttctcatactagaaaga
aaaggcagaattctcaatttcataaattcatttttcccaaacattctttt
ctaggaaccagcatcatttagctttgttggttaaggaattgctaacattt
gctacatcattctaaaaatcgcttaatttctcctccttcaacattagcag
ggagtttgtttctataggagtttgtatttcaaatattggcatgtgtgtca
cctgaattgtgtagaaggtagaatgttttccgaaaaaaatatgcctagaa
atcagttaatgctcacaaactcttctagtgaacaaataaggaatggttaa
ggaagaacagaagtcatgaacatcagagtgcagcattagggtgcctacac
agacttcgtgctcaatatttcatacagttcacaagtccctatgcaagtga
tgagacgtggcttctttatgaagaacaaacgagctaaggtaaagtgtgca
atgtccatcagccaatgagcaggtataatttcttataaatagttgtaaag
agaactggatacattggaaaagaaag
gaattctttgaatgattctctttaagagaaatgcaaaagcagaaaggtca
tgaattcaaggtcatctttgactctagtagtatagtaagtcctggcgata
catgcctgcattcctagaacttgggaggatgacagagatgggaagatagg
gatttatggtcagcatggattatataatgccatgacacaaacaaaaatat
tactaaaattcagaatgtaacatggaggcaatatgaatacatgataggca
aaagaagctagatctagaagatgatgtgccacatcatatcatttgtatga
aaaatggagagttggtaaattccaagtgaaagaaggtagtatctgagaca
gtggagagaatgggaccttaccaataacagctatgggttttttttgtttg
tttgtttgttttgtttttcttttattaatgatgaaatattttggaagtac
aaagtggttttattgtgtagctgcaggtataaaaaaaatgacactcaagt
aaacagtttcaaatggcctaaccagtggactttgtataataaaattttgc
attaagaaaagaaaaaaactaggataagctaaagagtgagcacaggaaaa
gagttggagtttgtgagaatcagtagtccttacagagtaagttgaaggtt
taagtcttttgaagatggatgaaatgctgttgttttggtatcaaagggat
tgatctcacagagaaagagaacatgtacccttccgctccactcgagcccc
gaggtaccttgccagcggaggcgccctacacccgcaaggacccacacagg
attccccacaggatcctaagacctctagtgagtggaacacaactcctgcc
aggagtccagttcgaacaccagatatctgggttcctttcctgcaagagag
agcttgcctgcagagatactctgcccactcaaactaaggagagaggtacc
ctcccaggtctgctatagaggcttacaggtcacctgagaacaagcttcta
acagagacactatacagctagcttcgagataccggatggcgaaagtagga
tcttactacagaattagacacctcatattctctgaacgcagccctcccac
cccacctatccttggtccctaacaaccgaaaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_15616102_15617312
seq2: B6Ng01-148M14.b_47_1222 (reverse)

seq1  CTTT-TTTTCCAATGTAATAACCAGATTTTTCTCTTTTTTTCCAAACTAT  49
      |||| ||||||||||   || ||||    ||||||||        || | 
seq2  CTTTCTTTTCCAATG---TATCCAG----TTCTCTTT--------ACAAC  35

seq1  TATATTAAAGGATATTTTATAACTTGCTCATTTGTGGCCTTGAT-GACAT  98
      ||| ||| | || ||| |   || |||||||   ||||  |||| |||||
seq2  TAT-TTATAAGAAATTAT---ACCTGCTCAT---TGGC--TGATGGACAT  76

seq1  TGCACACTTTTCCCTAAGCTCCCTTTTGTTCTTCATAAAGAAGCCCCGTC  148
      ||||||| ||| ||| ||||  | ||||||||||||||||||||| ||||
seq2  TGCACAC-TTTACCTTAGCT--CGTTTGTTCTTCATAAAGAAGCCACGTC  123

seq1  TTCATCACCTTTGGCATAGGGACCTTGTGGAACTGTATGAAATATTGAGC  198
       |||||||   | ||||||||| ||||| |||||||||||||||||||||
seq2  -TCATCAC---TTGCATAGGGA-CTTGT-GAACTGTATGAAATATTGAGC  167

seq1  ACCGAGGTTCTTGTGTAGGCACCCCTAATGCTGCACTCTTGATGTTCATG  248
      | ||| ||   |||||||||| |||||||||||||||| |||||||||||
seq2  A-CGAAGT--CTGTGTAGGCA-CCCTAATGCTGCACTC-TGATGTTCATG  212

seq1  ACTTCTGTTCTTCC-TGACCATTCCCTTATTTGTTCACTAGAAGAGTTTG  297
      |||||||||||||| | |||||| ||||||||||||||||||||||||||
seq2  ACTTCTGTTCTTCCTTAACCATT-CCTTATTTGTTCACTAGAAGAGTTTG  261

seq1  TGAGCATTAACTGATTTCTAGGCATA-TTTTCTCGGAAAACATTCTACCT  346
      |||||||||||||||||||||||||| |||| ||||||||||||||||||
seq2  TGAGCATTAACTGATTTCTAGGCATATTTTTTTCGGAAAACATTCTACCT  311

seq1  TCTACACAATTCAGGTGACACACATGCCAATATTTGAAATACAAACTCCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACAATTCAGGTGACACACATGCCAATATTTGAAATACAAACTCCT  361

seq1  ATAGAAACAAACTCCCTGCTAATGTTGAAGGAGGAGAAATTAAGCGATTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAACAAACTCCCTGCTAATGTTGAAGGAGGAGAAATTAAGCGATTT  411

seq1  TTAGAATGATGTAGCAAATGTTAGCAATTCCTTAACCAACAAAGCTAAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATGATGTAGCAAATGTTAGCAATTCCTTAACCAACAAAGCTAAAT  461

seq1  GATGCTGGTTCCTAGAAAAGAATGTTTGGGAAAAATGAATTTATGAAATT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGTTCCTAGAAAAGAATGTTTGGGAAAAATGAATTTATGAAATT  511

seq1  GAGAATTCTGCCTTTTCTTTCTAGTATGAGAAGCATGTCCCATTTTCAGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCTGCCTTTTCTTTCTAGTATGAGAAGCATGTCCCATTTTCAGT  561

seq1  CCTAGAATGATCTTAATTTTCCTTCTGTGACTTTTTGTACCTGTGAGGCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAATGATCTTAATTTTCCTTCTGTGACTTTTTGTACCTGTGAGGCT  611

seq1  ATATCCACTTGAGTGCTACATTCCTAAAGCAGGGGACTCTGGAAATCTAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCACTTGAGTGCTACATTCCTAAAGCAGGGGACTCTGGAAATCTAA  661

seq1  GAGTCTCATTTCTCTTCTTTAGTTGCTGATTGTGACTTTGAAGCAAACAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCATTTCTCTTCTTTAGTTGCTGATTGTGACTTTGAAGCAAACAG  711

seq1  CTGTGGGTGGTTTGAAGCCAGTGGTGGTGACCATTTTGACTGGGTGTGGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGTGGTTTGAAGCCAGTGGTGGTGACCATTTTGACTGGGTGTGGA  761

seq1  GCTCCCAAAGTAATCTTTCTGCTGATTTAGAACAACAAGCTCCACCTAGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAAAGTAATCTTTCTGCTGATTTAGAACAACAAGCTCCACCTAGA  811

seq1  GATCACACTCATGGTACAGCTCAAGGTAAGCCCCTAAAGATGTTTTACAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACACTCATGGTACAGCTCAAGGTAAGCCCCTAAAGATGTTTTACAC  861

seq1  ACACCTATAGACTGCTGGGTTAGACCTGGGAATCTGTGTGTGAAGATCAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTATAGACTGCTGGGTTAGACCTGGGAATCTGTGTGTGAAGATCAC  911

seq1  AACATGATAGGACAATACTGACAGTCAGCTGAGTTGCCTGCAAGAAATGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATAGGACAATACTGACAGTCAGCTGAGTTGCCTGCAAGAAATGA  961

seq1  TTTCTTTATGGGTAATATGACTGGAATTGAGACCATTTTGCCTTCATTAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATGGGTAATATGACTGGAATTGAGACCATTTTGCCTTCATTAA  1011

seq1  CTGAAATTAAAAATTGAGTGTTGACATCATCCAAATGCAGGTATAAATAC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATTAAAAATTGAGTGTTGACATCATCCAAATGCAGGTATAAATAC  1061

seq1  AAAAGCAAATTTTAGTATTGATATTGACTTTTTATTGTTGTGCAACTTTA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAAATTTTAGTATTGATATTGACTTTTTATTGTTGTGCAACTTTA  1111

seq1  ATGGACATGAACACACTTGGCATTGCATTAAGAGACAGAAGGGCTCTCAC  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACATGAACACACTTGGCATTGCATTAAGAGACAGAAGGGCTCTCAC  1161

seq1  TGTATTGTAGAATTC  1211
      |||||||||||||||
seq2  TGTATTGTAGAATTC  1176

seq1: chr2_15517810_15518963
seq2: B6Ng01-148M14.g_69_1203

seq1  GAATTCTTTGAATGATTCTCTTTAAGAGAAATGCAAAAGCAGAAAGGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAATGATTCTCTTTAAGAGAAATGCAAAAGCAGAAAGGTCA  50

seq1  TGAATTCAAGGTCATCTTTGACTCTAGTAGTATAGTAAGTCCTGGCGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCAAGGTCATCTTTGACTCTAGTAGTATAGTAAGTCCTGGCGATA  100

seq1  CATGCCTGCATTCCTAGAACTTGGGAGGATGACAGAGATGGGAAGATAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTGCATTCCTAGAACTTGGGAGGATGACAGAGATGGGAAGATAGG  150

seq1  GATTTATGGTCAGCATGGATTATATAATGCCATGACACAAACAAAAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATGGTCAGCATGGATTATATAATGCCATGACACAAACAAAAATAT  200

seq1  TACTAAAATTCAGAATGTAACATGGAGGCAATATGAATACATGATAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAAATTCAGAATGTAACATGGAGGCAATATGAATACATGATAGGCA  250

seq1  AAAGAAGCTAGATCTAGAAGATGATGTGCCACATCATATCATTTGTATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGCTAGATCTAGAAGATGATGTGCCACATCATATCATTTGTATGA  300

seq1  AAAATGGAGAGTTGGTAAATTCCAAGTGAAAGAAGGTAGTATCTGAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGAGAGTTGGTAAATTCCAAGTGAAAGAAGGTAGTATCTGAGACA  350

seq1  GTGGAGAGAATGGGACCTTACCAATAACAGCTATGGGTTTTTTTTGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGAGAATGGGACCTTACCAATAACAGCTATGGGTTTTTTTTGTTTG  400

seq1  TTTGTTTGTTTTGTTTTTCTTTTATTAATGATGAAATATTTTGGAAGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTTGTTTTTCTTTTATTAATGATGAAATATTTTGGAAGTAC  450

seq1  AAAGTGGTTTTATTGTGTAGCTGCAGGTATAAAAAAAATGACACTCAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGTTTTATTGTGTAGCTGCAGGTATAAAAAAAATGACACTCAAGT  500

seq1  AAACAGTTTCAAATGGCCTAACCAGTGGACTTTGTATAATAAAATTTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTTTCAAATGGCCTAACCAGTGGACTTTGTATAATAAAATTTTGC  550

seq1  ATTAAGAAAAGAAAAAAACTAGGATAAGCTAAAGAGTGAGCACAGGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAAAAGAAAAAAACTAGGATAAGCTAAAGAGTGAGCACAGGAAAA  600

seq1  GAGTTGGAGTTTGTGAGAATCAGTAGTCCTTACAGAGTAAGTTGAAGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGAGTTTGTGAGAATCAGTAGTCCTTACAGAGTAAGTTGAAGGTT  650

seq1  TAAGTCTTTTGAAGATGGATGAAATGCTGTTGTTTTGGTATCAAAGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTTTTGAAGATGGATGAAATGCTGTTGTTTTGGTATCAAAGGGAT  700

seq1  TGATCTCACAGAGAAAGAGAACATGTACCCTTCCGCTCCACTCGAGCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTCACAGAGAAAGAGAACATGTACCCTTCCGCTCCACTCGAGCCCC  750

seq1  GAGGTACCTTGCCAGCGGAGGCGCCCTACACCCGCAAGGACCCACACAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTACCTTGCCAGCGGAGGCGCCCTACACCCGCAAGGACCCACACAGG  800

seq1  ATTCCCCACAGGATCCTAAGACCTCTAGTGAGTGGAACACAACTCCTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCACAGGATCCTAAGACCTCTAGTGAGTGGAACACAACTCCTGCC  850

seq1  AGGAGTCCAGTTCGAACACCAGATATCTGGGTACCTTCCCTGCAAGAAGA  900
      |||||||||||||||||||||||||||||||| |||| |||||||| |||
seq2  AGGAGTCCAGTTCGAACACCAGATATCTGGGTTCCTTTCCTGCAAG-AGA  899

seq1  GAGCTTGCCTGCAGAGAATACTCTGCCCACTCAAACTAAGGAGAGAGGTA  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGCTTGCCTGCAGAG-ATACTCTGCCCACTCAAACTAAGGAGAGAGGTA  948

seq1  CCCTCCCAGGTCTGCTTATAGAGGCTAACAGGGTCACCTGAAGAACAAGC  1000
      ||||||||||||||| |||||||||| ||| ||||||||| |||||||||
seq2  CCCTCCCAGGTCTGC-TATAGAGGCTTACA-GGTCACCTG-AGAACAAGC  995

seq1  TCTTAACAGAGACAACTATAACAGCTAGCTTCAGAGATTACCAGATGGCG  1050
      |  |||||||||| ||||| |||||||||||| |||| |||| |||||||
seq2  TTCTAACAGAGAC-ACTAT-ACAGCTAGCTTC-GAGA-TACCGGATGGCG  1041

seq1  AAAGGTAAGAATCCTACTAACAGAAATCAAGACCACTCATCATCATCAGA  1100
      ||||   || ||| |||| |||||| |  ||||  ||||| ||  || ||
seq2  AAAG--TAGGATCTTACT-ACAGAATT--AGACACCTCAT-ATTCTCTGA  1085

seq1  ACGCAGCACTCCCACCCCACCTAATCCTGGGCACCCCAACACAACCGAAA  1150
      ||||||| |||||||||||||| ||||| ||   ||| | ||||||||||
seq2  ACGCAGCCCTCCCACCCCACCT-ATCCTTGG--TCCCTA-ACAACCGAAA  1131

seq1  ATCT  1154
      ||||
seq2  ATCT  1135