BAC Information

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BAC

Clone NameB6Ng01-148O10
Chromosome2 (Build37)
Map Location 61,986,034 - 61,987,120
singlet/doubletsinglet
Overlap geneSlc4a10
Upstream geneTank, Psmd14, Tbr1, LOC100039274
Downstream geneDpp4, Gcg, Fap, Ifih1, Gca, Kcnh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148O10.bB6Ng01-148O10.g
ACCDH945385DH945386
length1,1621,100
definitionDH945385|Mus musculus domesticus DNA, BAC clone: B6Ng01-148O10, 5' end.DH945386|Mus musculus domesticus DNA, BAC clone: B6Ng01-148O10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaatatccttaatcatcaggaaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacattcctccattgttggtg
gaattgcaagcttgtacaaccgctctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaacacctctcctgggc
atatatccagaagatgttccaaccagtaagaaggacacatgctgcactat
gttcatagcagccttatttataatagccagaagttggaaagaacccagac
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
acggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgagaagtggatattagcccagagac
gtaggatacacaagatataagatacaatttgctaaacgcatgaaactcaa
gaagaatgaagaccaaagtgtggacactttgccccttcttagaattggga
acaaaacacccatggaaggagttacagagacaaaatttggaagtgtgacg
aaaggatggaccatctagtgattgccatatccagggattcatcctatgat
cagcttccaaacactgacaccattgcatacactagcaagattttgctgaa
agggcccagatatagctgtctcatgtgagactatgccgggcctagcaaac
acagaagtagatgctcacagtcagctattgaatgggtcacagggccccaa
tggaggagctagagaagtttccaggactaaagggaactgcaacctatagt
ggaacacatatgactaacagtatccgggagctcttggtgctagctgcata
tgtatcaaagatggcctagtcagcatcactgggaagagaggcccattgga
cttgccacctttatattgccagtacggagcgcaggcaaaggggggagtgg
taggtaggaagc
gaattcaaacttgagaggtttcatgtatatggagagagagagagagagag
agagagagagagagagagagagagagagagagagagagagagagagagag
agtttaaaaccaatagagtttcaatacaaagcaaatatataaatccaatg
ttttaaggattttctacaatttatagtttaatggagtaaaatcttccagc
ttgaaaatgaaagtaagcaaatgtcaaatctctctgggttaaaaaaaatc
ttcaaaacacttagaagtcacaagcttcctttatgtaaaacaaattcgaa
atcagctttcagatgtggctaatgccttagcagagatgtatgttaaagct
ccaagtgcatcacaggacctgagaagtgattttaaatggctttaagagat
atcctagaataaaatacagatttcatgatttagcttataccctgtgcaag
tgtgcttccactcaccaaacttccattactgtgtatttcagcacagtgct
gacacactgattagtgattaaatctcagataacaaccatattgcaataga
tatctataggcagataatatagcaagtattattttcatttcactcattca
tgttattttttatcatttcaaataaatccggatctaatcaggattaatct
agaaaaaatttatagagctataaacgtttctaacacacaaagtatatctt
ccttttattccccatctctgtcccccaaaaaagaccaaagtaaaaacata
ctcatacatacatgcaaacccttcttaattcattttttacccattatcat
aattatcacctgttcaattatccaaatgaaaacgagttattaagtaatta
tgttggttaacatattccaaagggactatgatcctagacaaaagcaccca
ccttgcataccaaatagtatcacagttcacaagtgcatacttcttgactt
agaagattggaaatgctcacaggattcaggctgcatgaccctttctattt
cagaaaatccctaaaagatcacaacactgcttgtcttacaaaaaaaatag
taaataaataagctccagccatgttcttctcttcgtcatctacagggcta

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_61986034_61987120
seq2: B6Ng01-148O10.g_68_1167 (reverse)

seq1  TAGCCCTGTAGATGCCG-AGAGACAGACATGGCT-GAGCTTATTTATTTA  48
      |||||||||||||| || |||||   |||||||| |||||||||||||||
seq2  TAGCCCTGTAGATGACGAAGAGAAGAACATGGCTGGAGCTTATTTATTTA  50

seq1  CTTATTTTTTTGTAAGACAGGAAGTG-TGTGATCTTTTAGGGATTTCTGG  97
      ||  ||||||||||||||| | |||| |||||||||||||||||||   |
seq2  CTATTTTTTTTGTAAGACAAGCAGTGTTGTGATCTTTTAGGGATTTTCTG  100

seq1  AAATAGAAA-GGTCATGCAGCCTGGATCCTGTGAGCATTTCCAATC-TCT  145
      ||||||||| |||||||||||||| ||||||||||||||||||||| |||
seq2  AAATAGAAAGGGTCATGCAGCCTGAATCCTGTGAGCATTTCCAATCTTCT  150

seq1  AAGTCAAGAGGTATGCACTTGTGAACTGTGATACTA-TTGGTATGCAAGG  194
      ||||||||| |||||||||||||||||||||||||| |||||||||||||
seq2  AAGTCAAGAAGTATGCACTTGTGAACTGTGATACTATTTGGTATGCAAGG  200

seq1  TGGTTGC-TTTGTCTA-GATCATAGT-CCTTTGGAATATGTTAACCAACA  241
      ||| ||| |||||||| ||||||||| |||||||||||||||||||||||
seq2  TGGGTGCTTTTGTCTAGGATCATAGTCCCTTTGGAATATGTTAACCAACA  250

seq1  TAATTACTTAATAACTCGTTTTCATTTGGATAATTGAACAGGTGATAATT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACTTAATAACTCGTTTTCATTTGGATAATTGAACAGGTGATAATT  300

seq1  ATGATAATGGGTAAAAAATGAATTAAGAAGGGTTTGCATGTATGTATGAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATGGGTAAAAAATGAATTAAGAAGGGTTTGCATGTATGTATGAG  350

seq1  TATGTTTTTACTTTGGTCTTTTTTGGGGGACAGAGATGGGGAAT-AAAGG  390
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TATGTTTTTACTTTGGTCTTTTTTGGGGGACAGAGATGGGGAATAAAAGG  400

seq1  AAGATATACTTTGTGTGTTAGAAACGTTTATAGCTCTATAAATTTTTTCT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATACTTTGTGTGTTAGAAACGTTTATAGCTCTATAAATTTTTTCT  450

seq1  AGATTAATCCTGATTAGATCCGGATTTATTTGAAATGAT-AAAAATAACA  489
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGATTAATCCTGATTAGATCCGGATTTATTTGAAATGATAAAAAATAACA  500

seq1  TGAATGAGTGAAATGAAAATAATACTTGCTATATTATCTGCCTATAGATA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAGTGAAATGAAAATAATACTTGCTATATTATCTGCCTATAGATA  550

seq1  TCTATTGCAATATGGTTGTTATCTGAGATTTAATCACTAATCAGTGTGTC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGCAATATGGTTGTTATCTGAGATTTAATCACTAATCAGTGTGTC  600

seq1  AGCACTGTGCTGAAATACACAGTAATGGAAGTTTGGTGAGTGGAAGCACA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGTGCTGAAATACACAGTAATGGAAGTTTGGTGAGTGGAAGCACA  650

seq1  CTTGCACAGGGTATAAGCTAAATCATGAAATCTGTATTTTATTCTAGGAT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCACAGGGTATAAGCTAAATCATGAAATCTGTATTTTATTCTAGGAT  700

seq1  ATCTCTTAAAGCCATTTAAAATCACTTCTCAGGTCCTGTGATGCACTTGG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTAAAGCCATTTAAAATCACTTCTCAGGTCCTGTGATGCACTTGG  750

seq1  AGCTTTAACATACATCTCTGCTAAGGCATTAGCCACATCTGAAAGCTGAT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTAACATACATCTCTGCTAAGGCATTAGCCACATCTGAAAGCTGAT  800

seq1  TTCGAATTTGTTTTACATAAAGGAAGCTTGTGACTTCTAAGTGTTTTGAA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAATTTGTTTTACATAAAGGAAGCTTGTGACTTCTAAGTGTTTTGAA  850

seq1  GATTTTTTTTAACCCAGAGAGATTTGACATTTGCTTACTTTCATTTTCAA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTTAACCCAGAGAGATTTGACATTTGCTTACTTTCATTTTCAA  900

seq1  GCTGGAAGATTTTACTCCATTAAACTATAAATTGTAGAAAATCCTTAAAA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAGATTTTACTCCATTAAACTATAAATTGTAGAAAATCCTTAAAA  950

seq1  CATTGGATTTATATATTTGCTTTGTATTGAAACTCTATTGGTTTTAAA--  987
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  CATTGGATTTATATATTTGCTTTGTATTGAAACTCTATTGGTTTTAAACT  1000

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  1050

seq1  CTCTCTCTCTCTCTCTCTCCATATACATGAAACCTCTCAAGTTTGAATTC  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCCATATACATGAAACCTCTCAAGTTTGAATTC  1100