BAC Information

Click to search

BAC

Clone NameB6Ng01-149D01
Chromosome2 (Build37)
Map Location 86,275,374 - 86,343,480
singlet/doubletdoublet
Overlap geneOlfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1
Upstream geneOlfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062
Downstream geneGA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149D01.bB6Ng01-149D01.g
ACCDH945597DH945598
length1,1631,126
definitionDH945597|Mus musculus domesticus DNA, BAC clone: B6Ng01-149D01, 5' end.DH945598|Mus musculus domesticus DNA, BAC clone: B6Ng01-149D01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,342,311 - 86,343,480)(86,275,374 - 86,276,517)
sequence
gaattctttactgctttcaaggttaacaatcccatggggacatagcgata
atgagtaagtacacaataaataaaaatatattacaaagtagaggtgggga
tataatttattgacatgggcattataatgttttaatgtttacaaaatatt
tgctgacacatatgtgaatgtttattccttttttaaatttttatttcatg
tttctatagttatatttgcatagtaaaatgtaatcagtaatatgttataa
agcatataaaatttatcctgcaatagtggctatgaatatattaaaaattc
catcaccaatcatggaaaactgaattatgaaatgcttaaacttacagaca
cagtagctaaaagtgttatattgtaaaagttattgagtagatatgtaagt
ttactactgtagatcaaacaccaattgaattaataggaaaaatcagagaa
tatatgaacatataaattctttattaattttaatttagtatgtgtacaca
ttggtaaatttggggaaatactccattaatagctctttttctactgtccc
aacctgaactgcctgtttatatttagataaaagggcaaggattttatgct
gtattgtatttaatatgccctaagggtgtgcatgggatgtaaagcaaaat
catgaaaaatgagtgaataaaaatagccactctgaagagacagctatatc
agggtcctttcagcaaaatcttgctggcatatgctatagtgtctgcgttt
ggtggctgattatggaatggacccccatgtggggcagtctctggatggtc
catcctttcatcttaactccaaactttgtctctgtaactccttccagggg
tatactgtttcctattccagggaggaatgaagtatccacatgttggtctt
ccttcttcttgattttcttttgtatttgcaaattgtatcttgggtattct
aagtttttgggctgtcgcatccaccagcaggaaagacgcagcaccaagtt
gtccttcttcagcaggtttattcaggaacacttaacattgcagtgcagga
acaggaatccctaaacaccccaaggcatgcttaaataacctactgactcc
tctcaatcaccccagttcacgtaagtagtcataggttccacagcagtgac
gaacctcagtgag
gaattcagtcaccattgtgaggttgtgcttctctattcaggtttatggaa
gttctgttttgagtagagacatttgcactttgaatagattttcaatacca
tagtattcaaagtagcttcaataaaatatctctaaatatttttatttatt
tttcaaaattagtctatttctaagacatacacatatttttatgcatacac
atactcttttgcatataaatacacaaagagatacagacatgtagctggaa
aaacacagatatgcatcaatgatcctcacccaatgaaagtcttaattaga
gaataatctaagtcgtttaaaataatatttgcttttcctaactataatga
taagagccagttcaattcaatattaaaatttaaatctggagaatatcctc
ctacatataacatctagctaaagagtgattaagtctattaatactctcag
gatatgagaaatttgctatacagaaagacgtacatgtctaaattaataca
tatgaaattatataaatctatatagtacatcttgcaaacatgacatggaa
ttcaatgtaataaggcaattctgaataattccattttatcagaagaaaag
tcacaggaggggaatgatttctactcttgataaaaggtgtacatgctgat
gttttctgaataaagtcagaaataaaaagatttacagctgtcatcatggc
ataaaatgcagcatctgagtgagtgagagcaaaataccccagcagtcact
cttctgtgtacagctggttatatgtaattgaaacttccttcacttaacag
attgttgtaaaatatgcttatcatacagcattccactctctctatgtaca
cttcatatattaagcatgcaaaatcatcaattatttcataacagaattca
cccaatcttgttccctttacattgctttaatttgcaatgatataaaagta
aaaattaagtatgcttaatattaatttcttataagtagaacagaaaatga
aagttttcctctgaagaaatttaggactggagggaaaaaacaaacaaaca
tcttagtttaatatttattcactgatacttgaagctatttcaactctaat
ctcagcattagtgcaagtagtaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86342311_86343480
seq2: B6Ng01-149D01.b_47_1209 (reverse)

seq1  CTCACCTGAGGTTCGTCACTTGCTGT-GAACCTATGGACTACCTTTACGT  49
      |||| |||||||||||||| |||||| |||||||| ||||||  ||||||
seq2  CTCA-CTGAGGTTCGTCAC-TGCTGTGGAACCTAT-GACTAC--TTACGT  45

seq1  G-ACTGGGGTGATTGGGAGGAGTCAGTAGGGTATTTAAGGCATGCCCTGG  98
      | ||||||||||||| |||||||||||||| ||||||| ||||||| |||
seq2  GAACTGGGGTGATTGAGAGGAGTCAGTAGGTTATTTAA-GCATGCCTTGG  94

seq1  GGTTGTTTAGGGGATTCCTGTTCCTGCACTGCAATGTTAAGTGTTCCTGA  148
      || |||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GG-TGTTTA-GGGATTCCTGTTCCTGCACTGCAATGTTAAGTGTTCCTGA  142

seq1  ATAAACCTGCTTGAAGAAGGACAACTTGGTGCTGCGTCTTTCCTGCTGGT  198
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCTGC-TGAAGAAGGACAACTTGGTGCTGCGTCTTTCCTGCTGGT  191

seq1  GGATGCGACAGCCCAGAAACTTAGAATACCCAAGATACAATTTGCAAATA  248
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGATGCGACAGCCCAAAAACTTAGAATACCCAAGATACAATTTGCAAATA  241

seq1  CAAAAGAAAATCAAGAAGAAGGAAGACCAACATGTGGATACTTCATTCCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAAATCAAGAAGAAGGAAGACCAACATGTGGATACTTCATTCCT  291

seq1  CCCTGGAATAGGAAACAGTATACCCCTGGAAGGAGTTACAGAGACAAAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAATAGGAAACAGTATACCCCTGGAAGGAGTTACAGAGACAAAGT  341

seq1  TTGGAGTTAAGATGAAAGGATGGACCATCCAGAGACTGCCCCACATGGGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTTAAGATGAAAGGATGGACCATCCAGAGACTGCCCCACATGGGG  391

seq1  GTCCATTCCATAATCAGCCACCAAACGCAGACACTATAGCATATGCCAGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTCCATAATCAGCCACCAAACGCAGACACTATAGCATATGCCAGC  441

seq1  AAGATTTTGCTGAAAGGACCCTGATATAGCTGTCTCTTCAGAGTGGCTAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTGCTGAAAGGACCCTGATATAGCTGTCTCTTCAGAGTGGCTAT  491

seq1  TTTTATTCACTCATTTTTCATGATTTTGCTTTACATCCCATGCACACCCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCACTCATTTTTCATGATTTTGCTTTACATCCCATGCACACCCT  541

seq1  TAGGGCATATTAAATACAATACAGCATAAAATCCTTGCCCTTTTATCTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCATATTAAATACAATACAGCATAAAATCCTTGCCCTTTTATCTAA  591

seq1  ATATAAACAGGCAGTTCAGGTTGGGACAGTAGAAAAAGAGCTATTAATGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAACAGGCAGTTCAGGTTGGGACAGTAGAAAAAGAGCTATTAATGG  641

seq1  AGTATTTCCCCAAATTTACCAATGTGTACACATACTAAATTAAAATTAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTCCCCAAATTTACCAATGTGTACACATACTAAATTAAAATTAAT  691

seq1  AAAGAATTTATATGTTCATATATTCTCTGATTTTTCCTATTAATTCAATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTTATATGTTCATATATTCTCTGATTTTTCCTATTAATTCAATT  741

seq1  GGTGTTTGATCTACAGTAGTAAACTTACATATCTACTCAATAACTTTTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTGATCTACAGTAGTAAACTTACATATCTACTCAATAACTTTTAC  791

seq1  AATATAACACTTTTAGCTACTGTGTCTGTAAGTTTAAGCATTTCATAATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAACACTTTTAGCTACTGTGTCTGTAAGTTTAAGCATTTCATAATT  841

seq1  CAGTTTTCCATGATTGGTGATGGAATTTTTAATATATTCATAGCCACTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTCCATGATTGGTGATGGAATTTTTAATATATTCATAGCCACTAT  891

seq1  TGCAGGATAAATTTTATATGCTTTATAACATATTACTGATTACATTTTAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGATAAATTTTATATGCTTTATAACATATTACTGATTACATTTTAC  941

seq1  TATGCAAATATAACTATAGAAACATGAAATAAAAATTTAAAAAAGGAATA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAAATATAACTATAGAAACATGAAATAAAAATTTAAAAAAGGAATA  991

seq1  AACATTCACATATGTGTCAGCAAATATTTTGTAAACATTAAAACATTATA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCACATATGTGTCAGCAAATATTTTGTAAACATTAAAACATTATA  1041

seq1  ATGCCCATGTCAATAAATTATATCCCCACCTCTACTTTGTAATATATTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCATGTCAATAAATTATATCCCCACCTCTACTTTGTAATATATTTT  1091

seq1  TATTTATTGTGTACTTACTCATTATCGCTATGTCCCCATGGGATTGTTAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTGTGTACTTACTCATTATCGCTATGTCCCCATGGGATTGTTAA  1141

seq1  CCTTGAAAGCAGTAAAGAATTC  1170
      ||||||||||||||||||||||
seq2  CCTTGAAAGCAGTAAAGAATTC  1163

seq1: chr2_86275374_86276517
seq2: B6Ng01-149D01.g_69_1194

seq1  GAATTCAGTCACCATTGTGAGGTTGTGCTTCTCTATTCAGGTTTATGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCACCATTGTGAGGTTGTGCTTCTCTATTCAGGTTTATGGAA  50

seq1  GTTCTGTTTTGAGTAGAGACATTTGCACTTTGAATAGATTTTCAATACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTTTGAGTAGAGACATTTGCACTTTGAATAGATTTTCAATACCA  100

seq1  TAGTATTCAAAGTAGCTTCAATAAAATATCTCTAAATATTTTTATTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTCAAAGTAGCTTCAATAAAATATCTCTAAATATTTTTATTTATT  150

seq1  TTTCAAAATTAGTCTATTTCTAAGACATACACATATTTTTATGCATACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAATTAGTCTATTTCTAAGACATACACATATTTTTATGCATACAC  200

seq1  ATACTCTTTTGCATATAAATACACAAAGAGATACAGACATGTAGCTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTTTTGCATATAAATACACAAAGAGATACAGACATGTAGCTGGAA  250

seq1  AAACACAGATATGCATCAATGATCCTCACCCAATGAAAGTCTTAATTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAGATATGCATCAATGATCCTCACCCAATGAAAGTCTTAATTAGA  300

seq1  GAATAATCTAAGTCGTTTAAAATAATATTTGCTTTTCCTAACTATAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATCTAAGTCGTTTAAAATAATATTTGCTTTTCCTAACTATAATGA  350

seq1  TAAGAGCCAGTTCAATTCAATATTAAAATTTAAATCTGGAGAATATCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGCCAGTTCAATTCAATATTAAAATTTAAATCTGGAGAATATCCTC  400

seq1  CTACATATAACATCTAGCTAAAGAGTGATTAAGTCTATTAATACTCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATATAACATCTAGCTAAAGAGTGATTAAGTCTATTAATACTCTCAG  450

seq1  GATATGAGAAATTTGCTATACAGAAAGACGTACATGTCTAAATTAATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGAGAAATTTGCTATACAGAAAGACGTACATGTCTAAATTAATACA  500

seq1  TATGAAATTATATAAATCTATATAGTACATCTTGCAAACATGACATGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAATTATATAAATCTATATAGTACATCTTGCAAACATGACATGGAA  550

seq1  TTCAATGTAATAAGGCAATTCTGAATAATTCCATTTTATCAGAAGAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTAATAAGGCAATTCTGAATAATTCCATTTTATCAGAAGAAAAG  600

seq1  TCACAGGAGGGGAATGATTTCTACTCTTGATAAAAGGTGTACATGCTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGAGGGGAATGATTTCTACTCTTGATAAAAGGTGTACATGCTGAT  650

seq1  GTTTTCTGAATAAAGTCAGAAATAAAAAGATTTACAGCTGTCATCATGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTGAATAAAGTCAGAAATAAAAAGATTTACAGCTGTCATCATGGC  700

seq1  ATAAAATGCAGCATCTGAGTGAGTGAGAGCAAAATACCCCAGCAGTCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGCAGCATCTGAGTGAGTGAGAGCAAAATACCCCAGCAGTCACT  750

seq1  CTTCTGTGTACAGCTGGTTATATGTAATTGAAACTTCCTTCACTTAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTGTACAGCTGGTTATATGTAATTGAAACTTCCTTCACTTAACAG  800

seq1  ATTGTTGTAAAATATGCTTATCATACAGCATTCCACTCTCTCTATGTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGTAAAATATGCTTATCATACAGCATTCCACTCTCTCTATGTACA  850

seq1  CTTCATATATTAAGCATGCAAAATCATCAATTATTTCATAACAGAATTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATATATTAAGCATGCAAAATCATCAATTATTTCATAACAGAATTCA  900

seq1  CCCAATCTTGTTCCCTTTTACATTGCTTTAATTTGCAATGATATAAAAGT  950
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCCAATCTTGTTCCC-TTTACATTGCTTTAATTTGCAATGATATAAAAGT  949

seq1  AAAAAATTAAGTATGCTTAATATTAATTTTCTTATAAGTAAGAACAGATA  1000
       ||||||||||||||||||||||||| |||||||||||| |||||||| |
seq2  -AAAAATTAAGTATGCTTAATATTAA-TTTCTTATAAGT-AGAACAGAAA  996

seq1  TGAAAAGTTTTCCTCTGAAGAAATTTAGGACTGGAGGGAAAAAAACAAAC  1050
         ||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATGAAAGTTTTCCTCTGAAGAAATTTAGGACTGGAGGG-AAAAAACAAAC  1045

seq1  AAACATTCTTTAGTGTAAATTATTTTATTCACTGATACTTGAAAGCTATT  1100
      ||||||   ||||| |||  || |||||||||||||||||| ||||||||
seq2  AAACAT--CTTAGTTTAA--TA-TTTATTCACTGATACTTG-AAGCTATT  1089

seq1  TTTCAAAACTCTAATCTCAGCAAATTAGTTGCAAGTAGTAAAAA  1144
      |     |||||||||||||||  ||||| |||||||||||||||
seq2  T----CAACTCTAATCTCAGC--ATTAG-TGCAAGTAGTAAAAA  1126