BAC Information

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BAC

Clone NameB6Ng01-149F02
Chromosome2 (Build37)
Map Location 17,357,723 - 17,508,917
singlet/doubletdoublet
Overlap geneNebl
Upstream genePlxdc2, 4930515L03Rik, LOC383665
Downstream geneLOC100041319, LOC100041047, 1700113O17Rik, A930004D18Rik, 2810030E01Rik, Mllt10, LOC641254, Dnajc1, LOC100041388, LOC623325
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149F02.bB6Ng01-149F02.g
ACCDH945687DH945688
length1,1831,117
definitionDH945687|Mus musculus domesticus DNA, BAC clone: B6Ng01-149F02, 5' end.DH945688|Mus musculus domesticus DNA, BAC clone: B6Ng01-149F02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,507,733 - 17,508,917)(17,357,723 - 17,358,855)
sequence
gaattctttgcagtatccttcattagctgacttatcaagtgagaaaaaaa
taaagggaacaacaaaattaatcacagtcccatttaggcagttatttatg
ggtatgtgccatcatatctttacctgttcactcttttcttccattcccac
tgttttgtggaggatgctgatgctgctgatgctgccagtgtttcaattac
cactccctgccttcaagcatctatgggctctataggtgccaacttatcat
gagcaagtgagattaaatggtagaagacaagcaagcactttaggaaatag
catccagagactgtgcaaaacagtggctaacaggcattcaccaacttgca
taagtctgggggacatccacttggccagccacagatggtggtagatgtgg
attgccctggaacctggtgatcaggtggtagagagaagggaaagccgatt
tatcatcacttgctcctctttcatcagaaatcacaaggtgaactgcttca
aaatcattgcgtcagtagtgcttgtaaacctgccgctggttttgacaagg
acaggaagtagataatgataataataataatgattcccttgtggggcatc
tggcttttatagctcttggggatcaacataatatcctttcttctctttat
ggtaagaaagtgagccctggcttgctaagagatggctcagtgggcaaagg
cacttgctacctagccagaggacctgagttcagtgcctgggacccacctt
ctctattgaaggagaaaaccaagtgctccaggttatcctttgacttccat
gagcatgcaaacacacacacacacacacacacacacacacacacacacac
acacacacacacacacgcatgcgcacatgcacatgcatgtgcacacacat
gattgatgagataaaaataagttaaaaagaaattgagccttgatttccac
agatataacttttaaagaaaagtggaagccaattgtgtacttggagaaat
cgtatgacctccagccagatgacatacctcctccccagaagggagttctg
tgagctaactttttaatactgtgaaagggaaatgtctatcttctaacctg
ggtggtccccacctccctttgagaaaagagaaagctcaaatgttgtcagt
ttccggtaagaatctataagcctttttattgcc
gaattcctatctgatcacgatgacccagggttggtggcatggacatactt
gtttgtctgtttgtttgtttgtttttcctttcacttttctgagtttaaag
aagtccccactgcttttcccgcttgcgtcagtggcaataagcaggagtaa
acacattgcgacattaatacttcagtgggtctccaatgcactgtgtgact
tcgtttcagtgaaatgcgatgcttctgcttaatctttcatgagcttgtgg
gagtcttcacaccgtgactctttttaaaaactacatttactatcatgaac
ctgtctgacaaatgaagacagcttcggtacaattggtacaatttcatagc
aagtatctgtttcctttgacgcttagatttcataagcgttgccttcacca
gcaatcctaggtaagttttgcacaaagtagtaaaagaaatataaaattta
actgaaaactgagttattttgtgaggtagatttttaaaggatcaggactc
tttaaacagggcaatttcattggctacaaagagtaatacagtcctctaca
aatgacagcaactcagttcctgtctacactgggttaaacacaagctgtgt
aaataaaacccagtcctcaggtaaaaacaaaccaaattattatctacctc
caagactaactgcctttaagttacaacatccatgtgcgagccaccaggag
ggaaatggctttttgtctagagaagaatgggaggaaagatggaaacccac
actttttgaaaagaactgcaacctttcagaaaccacagctttacatgggt
tacctaattatatgctgttccgcctaatgactgcatggtgtgaggtgaac
cgcacaaaggctgcaggagcgggattctgaatagggccccatcatccatg
taaattgcaaattagaggccagcatatgtgactcaaacaatattagattg
acatgagctgcacattcaaacaggaggacatcacggagccacgcagggta
aagcgcagatctggttcacctttcttctagcaagtggatgggggaaatgt
cacataagagctgcattcggaacctctcagtgcagtacttcatcatactt
tctgttaggatacctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_17507733_17508917
seq2: B6Ng01-149F02.b_45_1227 (reverse)

seq1  GGCAATAAAAAAAAGTCTATAGACTCCTGACCCAGAGAACTGACAACATT  50
      ||||||  ||||| |  |||||| | || |||  |  |||||||||||||
seq2  GGCAAT--AAAAAGGCTTATAGA-TTCTTACC--GGAAACTGACAACATT  45

seq1  TGAGCTTTCTC-TTTCTCAAAGCGA-GTGCGGACCACCCAGGCTAGAAAG  98
      ||||||||||| |||||||||| || ||| |||||||||||| ||| |||
seq2  TGAGCTTTCTCTTTTCTCAAAGGGAGGTGGGGACCACCCAGGTTAG-AAG  94

seq1  ATAGACATTTCCTATTTCACAGTATTAAAAAAGTAAGCTCACAGAACTCC  148
      ||||||||||||  |||||||||||| ||||||| |||||||||||||||
seq2  ATAGACATTTCC-CTTTCACAGTATT-AAAAAGTTAGCTCACAGAACTCC  142

seq1  C-TCT-GTGAGGA-GTATGTCATCTGGCTGGAGGTCATTACGATTTCTCC  195
      | ||| | ||||| ||||||||||||||||||||||| ||||||||||||
seq2  CTTCTGGGGAGGAGGTATGTCATCTGGCTGGAGGTCA-TACGATTTCTCC  191

seq1  AAGTTACACAATTGGCTTCCAACTTTTCTTTAAAAGTTATATCTGTGGAA  245
      ||| |||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAG-TACACAATTGGCTTCC-ACTTTTCTTTAAAAGTTATATCTGTGGAA  239

seq1  ATCAAGGCTCAATTTCTTTTTAACTTATTTTTATCTCATCAATCATGTGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGCTCAATTTCTTTTTAACTTATTTTTATCTCATCAATCATGTGT  289

seq1  GTGCACATGCATGTGCATGTGCGCATGC----GTGTGTGTGTGTGTGTGT  341
      ||||||||||||||||||||||||||||    ||||||||||||||||||
seq2  GTGCACATGCATGTGCATGTGCGCATGCGTGTGTGTGTGTGTGTGTGTGT  339

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGCATGCTCATGGAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGCATGCTCATGGAA  389

seq1  GTCAAAGGATAACCTGGAGCACTTGGTTTTCTCCTTCAATAGAGAAGGTG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGGATAACCTGGAGCACTTGGTTTTCTCCTTCAATAGAGAAGGTG  439

seq1  GGTCCCAGGCACTGAACTCAGGTCCTCTGGCTAGGTAGCAAGTGCCTTTG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCAGGCACTGAACTCAGGTCCTCTGGCTAGGTAGCAAGTGCCTTTG  489

seq1  CCCACTGAGCCATCTCTTAGCAAGCCAGGGCTCACTTTCTTACCATAAAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGAGCCATCTCTTAGCAAGCCAGGGCTCACTTTCTTACCATAAAG  539

seq1  AGAAGAAAGGATATTATGTTGATCCCCAAGAGCTATAAAAGCCAGATGCC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAGGATATTATGTTGATCCCCAAGAGCTATAAAAGCCAGATGCC  589

seq1  CCACAAGGGAATCATTATTATTATTATCATTATCTACTTCCTGTCCTTGT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGGGAATCATTATTATTATTATCATTATCTACTTCCTGTCCTTGT  639

seq1  CAAAACCAGCGGCAGGTTTACAAGCACTACTGACGCAATGATTTTGAAGC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCAGCGGCAGGTTTACAAGCACTACTGACGCAATGATTTTGAAGC  689

seq1  AGTTCACCTTGTGATTTCTGATGAAAGAGGAGCAAGTGATGATAAATCGG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACCTTGTGATTTCTGATGAAAGAGGAGCAAGTGATGATAAATCGG  739

seq1  CTTTCCCTTCTCTCTACCACCTGATCACCAGGTTCCAGGGCAATCCACAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTTCTCTCTACCACCTGATCACCAGGTTCCAGGGCAATCCACAT  789

seq1  CTACCACCATCTGTGGCTGGCCAAGTGGATGTCCCCCAGACTTATGCAAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACCATCTGTGGCTGGCCAAGTGGATGTCCCCCAGACTTATGCAAG  839

seq1  TTGGTGAATGCCTGTTAGCCACTGTTTTGCACAGTCTCTGGATGCTATTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGAATGCCTGTTAGCCACTGTTTTGCACAGTCTCTGGATGCTATTT  889

seq1  CCTAAAGTGCTTGCTTGTCTTCTACCATTTAATCTCACTTGCTCATGATA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAGTGCTTGCTTGTCTTCTACCATTTAATCTCACTTGCTCATGATA  939

seq1  AGTTGGCACCTATAGAGCCCATAGATGCTTGAAGGCAGGGAGTGGTAATT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCACCTATAGAGCCCATAGATGCTTGAAGGCAGGGAGTGGTAATT  989

seq1  GAAACACTGGCAGCATCAGCAGCATCAGCATCCTCCACAAAACAGTGGGA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACTGGCAGCATCAGCAGCATCAGCATCCTCCACAAAACAGTGGGA  1039

seq1  ATGGAAGAAAAGAGTGAACAGGTAAAGATATGATGGCACATACCCATAAA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGAAAAGAGTGAACAGGTAAAGATATGATGGCACATACCCATAAA  1089

seq1  TAACTGCCTAAATGGGACTGTGATTAATTTTGTTGTTCCCTTTATTTTTT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCCTAAATGGGACTGTGATTAATTTTGTTGTTCCCTTTATTTTTT  1139

seq1  TCTCACTTGATAAGTCAGCTAATGAAGGATACTGCAAAGAATTC  1185
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTTGATAAGTCAGCTAATGAAGGATACTGCAAAGAATTC  1183

seq1: chr2_17357723_17358855
seq2: B6Ng01-149F02.g_66_1182

seq1  GAATTCCTATCTGATCACGATGACCCAGGGTTGGTGGCATGGACATACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATCTGATCACGATGACCCAGGGTTGGTGGCATGGACATACTT  50

seq1  GTTTGTCTGTTTGTTTGTTTGTTTTTCCTTTCACTTTTCTGAGTTTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCTGTTTGTTTGTTTGTTTTTCCTTTCACTTTTCTGAGTTTAAAG  100

seq1  AAGTCCCCACTGCTTTTCCCGCTTGCGTCAGTGGCAATAAGCAGGAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCCACTGCTTTTCCCGCTTGCGTCAGTGGCAATAAGCAGGAGTAA  150

seq1  ACACATTGCGACATTAATACTTCAGTGGGTCTCCAATGCACTGTGTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTGCGACATTAATACTTCAGTGGGTCTCCAATGCACTGTGTGACT  200

seq1  TCGTTTCAGTGAAATGCGATGCTTCTGCTTAATCTTTCATGAGCTTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTCAGTGAAATGCGATGCTTCTGCTTAATCTTTCATGAGCTTGTGG  250

seq1  GAGTCTTCACACCGTGACTCTTTTTAAAAACTACATTTACTATCATGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTCACACCGTGACTCTTTTTAAAAACTACATTTACTATCATGAAC  300

seq1  CTGTCTGACAAATGAAGACAGCTTCGGTACAATTGGTACAATTTCATAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGACAAATGAAGACAGCTTCGGTACAATTGGTACAATTTCATAGC  350

seq1  AAGTATCTGTTTCCTTTGACGCTTAGATTTCATAAGCGTTGCCTTCACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCTGTTTCCTTTGACGCTTAGATTTCATAAGCGTTGCCTTCACCA  400

seq1  GCAATCCTAGGTAAGTTTTGCACAAAGTAGTAAAAGAAATATAAAATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCCTAGGTAAGTTTTGCACAAAGTAGTAAAAGAAATATAAAATTTA  450

seq1  ACTGAAAACTGAGTTATTTTGTGAGGTAGATTTTTAAAGGATCAGGACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAAACTGAGTTATTTTGTGAGGTAGATTTTTAAAGGATCAGGACTC  500

seq1  TTTAAACAGGGCAATTTCATTGGCTACAAAGAGTAATACAGTCCTCTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACAGGGCAATTTCATTGGCTACAAAGAGTAATACAGTCCTCTACA  550

seq1  AATGACAGCAACTCAGTTCCTGTCTACACTGGGTTAAACACAAGCTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAGCAACTCAGTTCCTGTCTACACTGGGTTAAACACAAGCTGTGT  600

seq1  AAATAAAACCCAGTCCTCAGGTAAAAACAAACCAAATTATTATCTACCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAACCCAGTCCTCAGGTAAAAACAAACCAAATTATTATCTACCTC  650

seq1  CAAGACTAACTGCCTTTAAGTTACAACATCCATGTGCGAGCCACCAGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTAACTGCCTTTAAGTTACAACATCCATGTGCGAGCCACCAGGAG  700

seq1  GGAAATGGCTTTTTGTCTAGAGAAGAATGGGAGGAAAGATGGAAACCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGGCTTTTTGTCTAGAGAAGAATGGGAGGAAAGATGGAAACCCAC  750

seq1  ACTTTTTGAAAAGAACTGCAACCTTTCAGAAACCACAGCTTTACATGGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTGAAAAGAACTGCAACCTTTCAGAAACCACAGCTTTACATGGGT  800

seq1  TACCTAATTATATGCTGTTCCGCCTAATGACTGCATGGTGTGAGGTGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAATTATATGCTGTTCCGCCTAATGACTGCATGGTGTGAGGTGAAC  850

seq1  CGCACAAAGGCTGCAGGAGCGGGATTCTGAATAGGGCCCCATCATCCATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACAAAGGCTGCAGGAGCGGGATTCTGAATAGGGCCCCATCATCCATG  900

seq1  TAAATTGCAAATTAGAGGCCAGCATATGTGACTCAAAACAAATATTAAGA  950
      |||||||||||||||||||||||||||||||||||||   |||||| |||
seq2  TAAATTGCAAATTAGAGGCCAGCATATGTGACTCAAA--CAATATT-AGA  947

seq1  TTGACATGAGCTGCACATTCAAACAGGAGGACACCACGGAGCCACGCAGG  1000
      ||||||||||||||||||||||||||||||||| |||||||||||||| |
seq2  TTGACATGAGCTGCACATTCAAACAGGAGGACATCACGGAGCCACGCA-G  996

seq1  GGAAAAGCGCAGGATCTGGTTCACC-TTCTTCTAAGGCAACAGTGATGGG  1049
      || |||||||| ||||||||||||| ||||||||  ||||  | ||||||
seq2  GGTAAAGCGCA-GATCTGGTTCACCTTTCTTCTA--GCAAGTG-GATGGG  1042

seq1  GGAAATGTCACAATAAAGGAGGCTGCCATTCCGGACACTCTCAGGTTGCA  1099
      ||||||||||| ||||  || |||| |||| ||||  |||||||  ||| 
seq2  GGAAATGTCAC-ATAA--GA-GCTG-CATT-CGGAACCTCTCAG--TGC-  1083

seq1  AGTACTCCATCATACTCTCTGTTAGGATAACTGA  1133
      |||||| ||||||||| |||||||||||| ||||
seq2  AGTACTTCATCATACTTTCTGTTAGGATACCTGA  1117