BAC Information

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BAC

Clone NameB6Ng01-150B11
Chromosome2 (Build37)
Map Location 4,492,638 - 4,697,426
singlet/doubletdoublet
Overlap geneFrmd4a, Prpf18, LOC623483, E130319B15Rik
Upstream geneLOC666495, 3110001A13Rik, LOC100040257, LOC100040163, LOC666944, 1700080N15Rik, EG634452
Downstream geneLOC666973, Sephs1, Phyh, LOC381346, LOC100040250, LOC100040426, 1110017I16Rik, Mcm10, Optn, Ccdc3, LOC100040292, Camk1d, LOC666599
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150B11.bB6Ng01-150B11.g
ACCDH946259DH946260
length363407
definitionDH946259|Mus musculus domesticus DNA, BAC clone: B6Ng01-150B11, 5' end.DH946260|Mus musculus domesticus DNA, BAC clone: B6Ng01-150B11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,697,064 - 4,697,426)(4,492,638 - 4,493,050)
sequence
atgtctctcatgcaccgttgacacacaggaggcaaacatgaacatactgt
tcatgaagaacacatatggaaaccgtttggctctagtgcattcttatcct
gaaagaagtaaagaaagggtttttttgttttaatttttattttgatacct
gtgtgtgcttggtgtatgtactcaagtgtgtgcacacatacataggtgag
tggcagatatcaggtgtcctttctttatgtatttgagtgctctgtttgca
tgtacacatgcatgcaagaagagaacagcagatcacactatagatggttg
tgagctaccatgtgattgctggggattgaactcaggacctctagaagggc
agacaggagggat
attttctcctccttgcttaagcacaaataagtatagtcacaactatttgt
atgtatgtgcatgcgtgtgcgtgtgcgtgcgtgcgtgcgtgcgtgcgtgc
gtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gcatgttgctaggggttgagcctaggatcttgtacacactaacaaagtgc
tctaccatgacctatacctcttcattctactttttatgtttagaacaggt
atctcactaagtcacccgaactggctttgaacttgttcattggcccagtc
agattgtaaatttataatttccctgcctcagctcccccaagtcactagga
tcactggcctgacacaatttttcatttgttgctctgtcgagcagagaaga
cagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_4697064_4697426
seq2: B6Ng01-150B11.b_55_417 (reverse)

seq1  ATCCCTCCTGTCTGCCCTTCTAGAGGTCCTGAGTTCAATCCCCAGCAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCCTGTCTGCCCTTCTAGAGGTCCTGAGTTCAATCCCCAGCAATC  50

seq1  ACATGGTAGCTCACAACCATCTATAGTGTGATCTGCTGTTCTCTTCTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTAGCTCACAACCATCTATAGTGTGATCTGCTGTTCTCTTCTTGC  100

seq1  ATGCATGTGTACATGCAAACAGAGCACTCAAATACATAAAGAAAGGACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGTGTACATGCAAACAGAGCACTCAAATACATAAAGAAAGGACAC  150

seq1  CTGATATCTGCCACTCACCTATGTATGTGTGCACACACTTGAGTACATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATCTGCCACTCACCTATGTATGTGTGCACACACTTGAGTACATAC  200

seq1  ACCAAGCACACACAGGTATCAAAATAAAAATTAAAACAAAAAAACCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCACACACAGGTATCAAAATAAAAATTAAAACAAAAAAACCCTTT  250

seq1  CTTTACTTCTTTCAGGATAAGAATGCACTAGAGCCAAACGGTTTCCATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTTCTTTCAGGATAAGAATGCACTAGAGCCAAACGGTTTCCATAT  300

seq1  GTGTTCTTCATGAACAGTATGTTCATGTTTGCCTCCTGTGTGTCAACGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTTCATGAACAGTATGTTCATGTTTGCCTCCTGTGTGTCAACGGT  350

seq1  GCATGAGAGACAT  363
      |||||||||||||
seq2  GCATGAGAGACAT  363

seq1: chr2_4492638_4493050
seq2: B6Ng01-150B11.g_68_480

seq1  GAATTCATTTTCTCCTCCTTGCTTAAGCACAAATAAGTATAGTCACAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTCTCCTCCTTGCTTAAGCACAAATAAGTATAGTCACAACT  50

seq1  ATTTGTATGTATGTGCATGCGTGTGCGTGTGCGTGCGTGCGTGCGTGCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATGTATGTGCATGCGTGTGCGTGTGCGTGCGTGCGTGCGTGCGT  100

seq1  GCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  150

seq1  GTGTGTGCATGTTGCTAGGGGTTGAGCCTAGGATCTTGTACACACTAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGCATGTTGCTAGGGGTTGAGCCTAGGATCTTGTACACACTAACA  200

seq1  AAGTGCTCTACCATGACCTATACCTCTTCATTCTACTTTTTATGTTTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTCTACCATGACCTATACCTCTTCATTCTACTTTTTATGTTTAGA  250

seq1  ACAGGTATCTCACTAAGTCACCCGAACTGGCTTTGAACTTGTTCATTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTATCTCACTAAGTCACCCGAACTGGCTTTGAACTTGTTCATTGGC  300

seq1  CCAGTCAGATTGTAAATTTATAATTTCCCTGCCTCAGCTCCCCCAAGTAA  350
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCAGTCAGATTGTAAATTTATAATTTCCCTGCCTCAGCTCCCCCAAGTCA  350

seq1  CTAGGATTACTGGCCTGACACAATTTTTCATTTGTTGCTCTGTCGAGCAG  400
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATCACTGGCCTGACACAATTTTTCATTTGTTGCTCTGTCGAGCAG  400

seq1  AGAAGAAAGGGGA  413
      |||||| ||||||
seq2  AGAAGACAGGGGA  413