BAC Information

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BAC

Clone NameB6Ng01-150G04
Chromosome2 (Build37)
Map Location 88,342,600 - 88,541,782
singlet/doubletdoublet
Overlap geneOlfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196
Upstream genePramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1
Downstream geneOlfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150G04.bB6Ng01-150G04.g
ACCDH946477DH946478
length1,056587
definitionDH946477|Mus musculus domesticus DNA, BAC clone: B6Ng01-150G04, 5' end.DH946478|Mus musculus domesticus DNA, BAC clone: B6Ng01-150G04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,540,722 - 88,541,782)(88,342,600 - 88,343,186)
sequence
gaattctctttgaattcccactctgttaatatctaaaaacaaagagttta
atatatataaatatttgtaaaattttctaggtttaaaataccattactaa
tattgaattaagaattgggtgtgtatttatatactttcctaaagggctta
attaatgcattaaataaatcaaatatgacgattgttactcaatatatgtt
cttacaaaagtttaaaaagatctgtcaaagttgcatctttgttgtttaat
ttcagatgaactaagtttcagctgtgcatgtggattcacctagaattcat
ggaaaatcataaaaatgtcacagagttcattttcatgggtctttggcaga
atagacaaatagagctgctgttctttctcttgttcctgctttgctatctg
gctatcttaatggggaactctgtcatcctattcaccatcacctgcagcca
cctaatagaacaaccaatgtattattttctctgccatctttccctcatgg
acctctgctacacctctactgtgattcccaggctcatcagagacttggcc
acaacaagaaaaaacatttcctataatgagtgcatgacccagctcttcac
ttcccacttgctggcaggtgtggaaatcttcatcctggtgtccatggcct
tggaccgctatgttgccattgtcaagcccctgcactacatggttatcatg
agcaggaagagatgtgatatgttgattgtcacggcctggatactggggtt
ctggcactccattgctttactactgatggtgctcagtctgccattctgtg
gtcccaaccacatcaatcactacttgtgtgacatcaagcctcttctgaaa
ttggtctgtaaagacgttcatgttgtaagtatcttagcaattgccaactc
tgggatggtgctttttgctatttttattgtactacttgcctcttacatac
tcatattgtattctctgagacagatcatctgcaggagcgcaaagcactct
ctactgtagtcacacatatgtagtagttttatttttttggccctgtatct
attata
gaattctatgtagttttccatgaatagtgagtggcatttgtcaatttctt
tctagtcctttgaataacactttacagtaggctcatagttttcaagggga
ggttccaaggctggacaatcttactgaggctatggaggacccaccgaaag
ggatctatcatgaatgccttctgaaagacttaacaagcagctgaaagagt
aagatgcagatatttgcacccaaccaatggacaaaaactgctgtcccctg
ttgttgaattgagaaaaggcaggaggaggctgaggaagagggcaaccctg
taggaagaccagcagtctcaattaatcttgacccctgaggtctctcaaac
actggactaccaaccaggcagcatacaccagctgatatgaacccgccccc
acccacccacccacacatacagtagaggactgctgggtctgagttcagtc
agagaagatccacctaaccctcaagaaactggaggccctagggaatttag
agttctggtggggtgggggttggggccatcctcatggagtcagagggcca
gggaggagatatgggatgtggaacagttggagggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88540722_88541782
seq2: B6Ng01-150G04.b_46_1101 (reverse)

seq1  TATAA---ATACAGGGCCCAAAAAATAAAACTACTACCATTATGTGTGAA  47
      |||||   |||||||||| ||||||||||||||||||   |||||||| |
seq2  TATAATAGATACAGGGCCAAAAAAATAAAACTACTAC--ATATGTGTG-A  47

seq1  CTACAGGTAGAGAGTGCTTTGCGCTTCCCTGCAGATGATCTTGTCCTCAG  97
      ||||| |||||||||||||||||||  ||||||||||||| ||| |||||
seq2  CTACA-GTAGAGAGTGCTTTGCGCT--CCTGCAGATGATC-TGT-CTCAG  92

seq1  AGAATACAATATGAGTATGTAAGAGGCAAGTAGTACAATAAAAATAGCAA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACAATATGAGTATGTAAGAGGCAAGTAGTACAATAAAAATAGCAA  142

seq1  AAAGCACCATCCCAGAGTTGGCAATTGCTAAGATACTTACAACATGAACG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACCATCCCAGAGTTGGCAATTGCTAAGATACTTACAACATGAACG  192

seq1  TCTTTACAGACCAATTTCAGAAGAGGCTTGATGTCACACAAGTAGTGATT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACAGACCAATTTCAGAAGAGGCTTGATGTCACACAAGTAGTGATT  242

seq1  GATGTGGTTGGGACCACAGAATGGCAGACTGAGCACCATCAGTAGTAAAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGTTGGGACCACAGAATGGCAGACTGAGCACCATCAGTAGTAAAG  292

seq1  CAATGGAGTGCCAGAACCCCAGTATCCAGGCCGTGACAATCAACATATCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAGTGCCAGAACCCCAGTATCCAGGCCGTGACAATCAACATATCA  342

seq1  CATCTCTTCCTGCTCATGATAACCATGTAGTGCAGGGGCTTGACAATGGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTTCCTGCTCATGATAACCATGTAGTGCAGGGGCTTGACAATGGC  392

seq1  AACATAGCGGTCCAAGGCCATGGACACCAGGATGAAGATTTCCACACCTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGCGGTCCAAGGCCATGGACACCAGGATGAAGATTTCCACACCTG  442

seq1  CCAGCAAGTGGGAAGTGAAGAGCTGGGTCATGCACTCATTATAGGAAATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAAGTGGGAAGTGAAGAGCTGGGTCATGCACTCATTATAGGAAATG  492

seq1  TTTTTTCTTGTTGTGGCCAAGTCTCTGATGAGCCTGGGAATCACAGTAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTGTTGTGGCCAAGTCTCTGATGAGCCTGGGAATCACAGTAGA  542

seq1  GGTGTAGCAGAGGTCCATGAGGGAAAGATGGCAGAGAAAATAATACATTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGCAGAGGTCCATGAGGGAAAGATGGCAGAGAAAATAATACATTG  592

seq1  GTTGTTCTATTAGGTGGCTGCAGGTGATGGTGAATAGGATGACAGAGTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCTATTAGGTGGCTGCAGGTGATGGTGAATAGGATGACAGAGTTC  642

seq1  CCCATTAAGATAGCCAGATAGCAAAGCAGGAACAAGAGAAAGAACAGCAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTAAGATAGCCAGATAGCAAAGCAGGAACAAGAGAAAGAACAGCAG  692

seq1  CTCTATTTGTCTATTCTGCCAAAGACCCATGAAAATGAACTCTGTGACAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTTGTCTATTCTGCCAAAGACCCATGAAAATGAACTCTGTGACAT  742

seq1  TTTTATGATTTTCCATGAATTCTAGGTGAATCCACATGCACAGCTGAAAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGATTTTCCATGAATTCTAGGTGAATCCACATGCACAGCTGAAAC  792

seq1  TTAGTTCATCTGAAATTAAACAACAAAGATGCAACTTTGACAGATCTTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCATCTGAAATTAAACAACAAAGATGCAACTTTGACAGATCTTTT  842

seq1  TAAACTTTTGTAAGAACATATATTGAGTAACAATCGTCATATTTGATTTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTTTGTAAGAACATATATTGAGTAACAATCGTCATATTTGATTTA  892

seq1  TTTAATGCATTAATTAAGCCCTTTAGGAAAGTATATAAATACACACCCAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGCATTAATTAAGCCCTTTAGGAAAGTATATAAATACACACCCAA  942

seq1  TTCTTAATTCAATATTAGTAATGGTATTTTAAACCTAGAAAATTTTACAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATTCAATATTAGTAATGGTATTTTAAACCTAGAAAATTTTACAA  992

seq1  ATATTTATATATATTAAACTCTTTGTTTTTAGATATTAACAGAGTGGGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATATATATTAAACTCTTTGTTTTTAGATATTAACAGAGTGGGAA  1042

seq1  TTCAAAGAGAATTC  1061
      ||||||||||||||
seq2  TTCAAAGAGAATTC  1056

seq1: chr2_88342600_88343186
seq2: B6Ng01-150G04.g_69_655

seq1  GAATTCTATGTAGTTTTCCATGAATAGTGAGTGGCATTTGTCAATTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTAGTTTTCCATGAATAGTGAGTGGCATTTGTCAATTTCTT  50

seq1  TCTAGTCCTTTGAATAACACTTTACAGTAGGCTCATAGTTTTCAAGGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCCTTTGAATAACACTTTACAGTAGGCTCATAGTTTTCAAGGGGA  100

seq1  GGTTCCAAGGCTGGACAATCTTACTGAGGCTATGGAGGACCCACCGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCAAGGCTGGACAATCTTACTGAGGCTATGGAGGACCCACCGAAAG  150

seq1  GGATCTATCATGAATGCCTTCTGAAAGACTTAACAAGCAGCTGAAAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTATCATGAATGCCTTCTGAAAGACTTAACAAGCAGCTGAAAGAGT  200

seq1  AAGATGCAGATATTTGCACCCAACCAATGGACAAAAACTGCTGTCCCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCAGATATTTGCACCCAACCAATGGACAAAAACTGCTGTCCCCTG  250

seq1  TTGTTGAATTGAGAAAAGGCAGGAGGAGGCTGAGGAAGAGGGCAACCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAATTGAGAAAAGGCAGGAGGAGGCTGAGGAAGAGGGCAACCCTG  300

seq1  TAGGAAGACCAGCAGTCTCAATTAATCTTGACCCCTGAGGTCTCTCAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGACCAGCAGTCTCAATTAATCTTGACCCCTGAGGTCTCTCAAAC  350

seq1  ACTGGACTACCAACCAGGCAGCATACACCAGCTGATATGAACCCGCCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACTACCAACCAGGCAGCATACACCAGCTGATATGAACCCGCCCCC  400

seq1  ACCCACCCACCCACACATACAGTAGAGGACTGCTGGGTCTGAGTTCAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCCACCCACACATACAGTAGAGGACTGCTGGGTCTGAGTTCAGTC  450

seq1  AGAGAAGATCCACCTAACCCTCAAGAAACTGGAGGCCCTAGGGAATTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGATCCACCTAACCCTCAAGAAACTGGAGGCCCTAGGGAATTTAG  500

seq1  AGTTCTGGTGGGGTGGGGGTTGGGGCCATCCTCATGGAGTCAGAGGGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGGTGGGGTGGGGGTTGGGGCCATCCTCATGGAGTCAGAGGGCCA  550

seq1  GGGAGGAGATATGGGATGTGGAACAGTTGGAGGGTGG  587
      |||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAGATATGGGATGTGGAACAGTTGGAGGGTGG  587