BAC Information

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BAC

Clone NameB6Ng01-150M01
Chromosome2 (Build37)
Map Location 77,412,311 - 77,580,472
singlet/doubletdoublet
Overlap geneZfp533
Upstream geneOsbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1, LOC623706, LOC667906
Downstream geneBC003993, LOC667920, OTTMUSG00000016703, LOC383717, LOC100040476
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150M01.bB6Ng01-150M01.g
ACCDH946752DH946753
length1,079349
definitionDH946752|Mus musculus domesticus DNA, BAC clone: B6Ng01-150M01, 5' end.DH946753|Mus musculus domesticus DNA, BAC clone: B6Ng01-150M01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,412,311 - 77,413,393)(77,580,124 - 77,580,472)
sequence
gaattcactcacaaaccaccattgggaagtaaatatccattatcatgtga
gcatagaaattatcatgtaagtaagaattgttattatttttccattggca
tgagaggtcaagtattcactgacaacacatttgtagaagtacaaaggcca
tggctgttaacatttatgccgcattccttccctctggagttgaagaaagg
gttagctagtgaggagcaagcttctgctgaggtgcgcaggtctgagtctg
aaggttcaggcaggctttgagaaggacatcctttcctcagaacacgacat
ccacgtctgagtacccatgcctccgaggcctagagctcagggctgacact
gtgaagaccacagtgcaggtgagactgagaggcctccacatggacccagc
aggccactgctgctctcagaagaagcttctgcttggggtctcctcatgct
atttcatttgttttgctctgagagaaacagggctttctaggttttcagct
gcagaaatcttgagttttcccaaacttagaggttagggagatttaccatc
cataaacacaaagatggtttaaaattcagtggctgcatgtcttcctggct
tttagttattgtgtttgaaaagactttccttgacaaaatcgacactttta
tagaaataattgaagaatttttcattgtaagagcaccggagccttatgag
agattttttttttgaatgatacgtaaaataataaagatgaaaagctatat
ctccatggtagctactcccgataggtatttttctatttcataatcttttg
ggaatgcatgctgggtgaaattgtgtggtctgactcagcttttctcacag
gactgacacacgtgggagagagtcagtactggcatatccttggtctggga
cgtccatcattccctggtgtcaccaatgatgcctatatgctgcctactag
ctttctggccagattatttggttatcacagacatcaatttctagctggtg
caccagtatggattggcatgatgctattgaaatgtgtgtggcattgttag
gatagaacctgtgccaatagggatgagcc
cacatacaaaaaaatgtgtcttcggggaacaatcattaatatgtacaggc
gcacacatagcccaaatactctttccgagggatttttctaagtagccaaa
gcaggagggtgaggggagatggaaatatggctcagtagtggagcttgtgc
ctagcaacattcaggttccgcaactaagacgcatgtgccattgatggctg
caggggaagggaaaatcagttgtctgcaatggagtgtcactgcgtatagc
aaccatattccagggcagactccaggcccaggaggagctgaccaacatga
aaaaattactttggagagtatgtgtatggtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_77412311_77413393
seq2: B6Ng01-150M01.b_44_1122

seq1  GAATTCACTCACAAACCACCATTGGGAAGTAAATATCCATTATCATGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCACAAACCACCATTGGGAAGTAAATATCCATTATCATGTGA  50

seq1  GCATAGAAATTATCATGTAAGTAAGAATTGTTATTATTTTTCCATTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGAAATTATCATGTAAGTAAGAATTGTTATTATTTTTCCATTGGCA  100

seq1  TGAGAGGTCAAGTATTCACTGACAACACATTTGTAGAAGTACAAAGGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGTCAAGTATTCACTGACAACACATTTGTAGAAGTACAAAGGCCA  150

seq1  TGGCTGTTAACATTTATGCCGCATTCCTTCCCTCTGGAGTTGAAGAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTTAACATTTATGCCGCATTCCTTCCCTCTGGAGTTGAAGAAAGG  200

seq1  GTTAGCTAGTGAGGAGCAAGCTTCTGCTGAGGTGCGCAGGTCTGAGTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTAGTGAGGAGCAAGCTTCTGCTGAGGTGCGCAGGTCTGAGTCTG  250

seq1  AAGGTTCAGGCAGGCTTTGAGAAGGACATCCTTTCCTCAGAACACGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCAGGCAGGCTTTGAGAAGGACATCCTTTCCTCAGAACACGACAT  300

seq1  CCACGTCTGAGTACCCATGCCTCCGAGGCCTAGAGCTCAGGGCTGACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTCTGAGTACCCATGCCTCCGAGGCCTAGAGCTCAGGGCTGACACT  350

seq1  GTGAAGACCACAGTGCAGGTGAGACTGAGAGGCCTCCACATGGACCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGACCACAGTGCAGGTGAGACTGAGAGGCCTCCACATGGACCCAGC  400

seq1  AGGCCACTGCTGCTCTCAGAAGAAGCTTCTGCTTGGGGTCTCCTCATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACTGCTGCTCTCAGAAGAAGCTTCTGCTTGGGGTCTCCTCATGCT  450

seq1  ATTTCATTTGTTTTGCTCTGAGAGAAACAGGGCTTTCTAGGTTTTCAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTGTTTTGCTCTGAGAGAAACAGGGCTTTCTAGGTTTTCAGCT  500

seq1  GCAGAAATCTTGAGTTTTCCCAAACTTAGAGGTTAGGGAGATTTACCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAATCTTGAGTTTTCCCAAACTTAGAGGTTAGGGAGATTTACCATC  550

seq1  CATAAACACAAAGATGGTTTAAAATTCAGTGGCTGCATGTCTTCCTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACACAAAGATGGTTTAAAATTCAGTGGCTGCATGTCTTCCTGGCT  600

seq1  TTTAGTTATTGTGTTTGAAAAGACTTTCCTTGACAAAATCGACACTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTATTGTGTTTGAAAAGACTTTCCTTGACAAAATCGACACTTTTA  650

seq1  TAGAAATAATTGAAGAATTTTTCATTGTAAGAGCACCGGAGCCTTATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATAATTGAAGAATTTTTCATTGTAAGAGCACCGGAGCCTTATGAG  700

seq1  AGATTTTTTTTTTGAATGATACGTAAAATAATAAAGATGAAAAGCTATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTTTTTGAATGATACGTAAAATAATAAAGATGAAAAGCTATAT  750

seq1  CTCCATGGTAGCTACTCCCGATAGGTATTTTTCTATTTCATAATCTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGGTAGCTACTCCCGATAGGTATTTTTCTATTTCATAATCTTTTG  800

seq1  GGAATGCATGCTGGGTGAAATTGTGTGGTCTGACTCAGCTTTTCTCACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCATGCTGGGTGAAATTGTGTGGTCTGACTCAGCTTTTCTCACAG  850

seq1  GACTGACACACGTGGGAGAGAGTCAGTACTGGCATATCCTTGGTCTGGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGACACACGTGGGAGAGAGTCAGTACTGGCATATCCTTGGTCTGGGA  900

seq1  CGTCCATCATTCCCTGGTGTCACCAATGATGCCTATATGCTGCCTACTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCATCATTCCCTGGTGTCACCAATGATGCCTATATGCTGCCTACTAG  950

seq1  CTTTCTGGCCAAGATTATTTGGTTAATCACAGACATC-ATTTCTAGCTGG  999
      |||||||||| ||||||||||||| |||||||||||| ||||||||||||
seq2  CTTTCTGGCC-AGATTATTTGGTT-ATCACAGACATCAATTTCTAGCTGG  998

seq1  TGCACAGGTATGGATGTGGCATGATGCTATGAAAATGTGTGTGGCATGTT  1049
      |||||  |||||||| ||||||||||||||  |||||||||||||||  |
seq2  TGCACCAGTATGGAT-TGGCATGATGCTATTGAAATGTGTGTGGCATTGT  1047

seq1  TAGGGATAGGACACTGTGCGAATAGGGATGAGCC  1083
      || |||||| || |||||| ||||||||||||||
seq2  TA-GGATAGAAC-CTGTGCCAATAGGGATGAGCC  1079

seq1: chr2_77580124_77580472
seq2: B6Ng01-150M01.g_72_420 (reverse)

seq1  CACACACACACACACACACACCATACACATACTCTCCAAAGTAATTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACCATACACATACTCTCCAAAGTAATTTTTT  50

seq1  CATGTTGGTCAGCTCCTCCTGGGCCTGGAGTCTGCCCTGGAATATGGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGGTCAGCTCCTCCTGGGCCTGGAGTCTGCCCTGGAATATGGTTG  100

seq1  CTATACGCAGTGACACTCCATTGCAGACAACTGATTTTCCCTTCCCCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACGCAGTGACACTCCATTGCAGACAACTGATTTTCCCTTCCCCTGC  150

seq1  AGCCATCAATGGCACATGCGTCTTAGTTGCGGAACCTGAATGTTGCTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCAATGGCACATGCGTCTTAGTTGCGGAACCTGAATGTTGCTAGG  200

seq1  CACAAGCTCCACTACTGAGCCATATTTCCATCTCCCCTCACCCTCCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCTCCACTACTGAGCCATATTTCCATCTCCCCTCACCCTCCTGCT  250

seq1  TTGGCTACTTAGAAAAATCCCTCGGAAAGAGTATTTGGGCTATGTGTGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTACTTAGAAAAATCCCTCGGAAAGAGTATTTGGGCTATGTGTGCG  300

seq1  CCTGTACATATTAATGATTGTTCCCCGAAGACACATTTTTTTGTATGTG  349
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACATATTAATGATTGTTCCCCGAAGACACATTTTTTTGTATGTG  349