BAC Information

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BAC

Clone NameB6Ng01-151B07
Chromosome2 (Build37)10 (Build37)
Map Location 142,776,199 - 142,776,837103,111,341 - 103,112,500
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151B07.bB6Ng01-151B07.g
ACCDH946994DH946995
length1,0331,134
definitionDH946994|Mus musculus domesticus DNA, BAC clone: B6Ng01-151B07, 5' end.DH946995|Mus musculus domesticus DNA, BAC clone: B6Ng01-151B07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,199 - 142,776,837)(103,111,341 - 103,112,500)
sequence
gaattcactttcttctacttgataaccaccagttgtgccagcaccatttg
ttgaaaatgctgtcttttttccactggatggtttttgctcctttgtcgaa
gatcaagtgaccataggtgtgtgggttcatttctgggtcttctattccat
tggtctacttgtctgtcactataccagtaccatgcagtttttatcacaat
tgctctgtagtacagctttaggtcaggcatggtgattccaccagaggttc
ttttatccttgagaagagttttagctatcctaggttttttgttattctag
atgaatttgcagattgccctttctaattcgttgaagaattgagttggaat
tttgatggggattgcattgaatctgtagattgcttttggcaagatagcta
tttttactatattgatcctgccaatccatgagcatgggagatctttccat
cttctgagatcttctttaacttttttcttcagagacttgaagtttttatc
atacagatctttcacttccttagttagagtcatgtcaatgtattttataa
tatttgtgactatttagaagggtgttgtttccctaatttctctcgcagcc
tgtttatcctttgtctacagaaagaccattgacttgtttgagtaaaataa
ctgttttaatcgtaaatgcttatattctgtcgcttcaatttttatcagtt
ttccctagtaaataagatggaacatagttttcctattttcttatgtaaaa
ttgatttgataattcatttagtatatcagggaattgtgaggtagagaaaa
gatcaagagtaaaactgatataaagattctattatgtaagtagctcatga
attagttatattagaaggcttcatcaccttatggtttaaaattttatgtt
atatatcataatacaaatattcagtagatacgaattgtttcttatattta
ttttaaattatgaaatgtgaaataacttgttgaaacatcagtaaaatggt
ttttatgtgactcacattgaccaaatcttaaat
gaattccatatgcagaactaattgctctcttttctgggatttctctattc
gattatatatacattaaacgattatttattgaaattttcactcagcctac
tagactctgaagagaaaaaaatgtgtcttagtaatatttatttatgtatt
tatttttatctattttatttatttatttatttttgtttttctttttttca
aaccagatacaattcagaattttattttctttttaaataaaaaaacaaaa
caaaacaaaacaaaatcaaattttttatgtatgagtacactgtctctgtc
ttcagacatactagaggagggcatgcgattccattacatatggttgtgag
ccaccatgtggttgctgggaattgaactcaggacctcctgaagagcagtc
aatgctcttaaccactgaacgatctctccagcctgaattttattttctta
aacaaacataaagccccaaatcctttttaatgtatacgggtctttccctg
catgtatgtctgcacatcacctacatatctggaacccagacgacaggaga
ggacatcagatatcttggaatttagaggccagaagagaacatcaaatgcc
ctgaaactggagttacagacagttgtgagctgccacgtgagtgctgagaa
tcgaatctgggtcctctggagagaagcaagtgctcttaactattgattca
tttggtttttcgagacagggtttctctgtgtcgccctggctgtcctggaa
ctcactttgtagaccaggctggcctcaaattcagaaatctgcctgccttt
gcctcccaagagctggaattaaaggcatgtgccaccacgcccagcttgtg
attttttttttaatttgtaaaaattttacatgtgcaatttacatggatgt
tcctctccctcctattgtgtatatgtatgtacagatacaaaatctggtaa
gtctgtttaatattgcttatattatatgttttatggataccctgcgtagt
gaaaacaacgaaaagaattctccctcctctcagtatcatccatactcata
gcctctcatctatggtggactgtggattccccatccacaggcatgcactg
gtgggtattttttttttgatctttgggcagcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776199_142776837
seq2: B6Ng01-151B07.b_56_689 (reverse)

seq1  ACTCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAAACAGGCTGAG  50
      |||||||||||||||||| |||||| || |||||| |||||||||||| |
seq2  ACTCAAACAAGTCAATGGTCTTTCTGTAGACAAAGGATAAACAGGCTGCG  50

seq1  AAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAA  100
      | |||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  AGAGAAATTAGGGAAACAACACCCTTCTAAATAGTCACAAATATTATAAA  100

seq1  ATATCTCGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAA  150
      |||  | | | |||||||||||||||||||||||||||||||||||||||
seq2  ATACATTGACATGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAA  150

seq1  ACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAG  200
      |||||||||||||||||||| || ||||||||||||||||||||||||| 
seq2  ACTTCAAGTCTCTGAAGAAAAAAGTTAAAGAAGATCTCAGAAGATGGAAA  200

seq1  GATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTAT  250
      |||||||||||||||||||||||||||||||| || |||||||| |||||
seq2  GATCTCCCATGCTCATGGATTGGCAGGATCAATATAGTAAAAATAGCTAT  250

seq1  CTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAA  300

seq1  CTCAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAAT  350
      ||||||||||||||||||||||| | ||||| ||||||||||||| ||||
seq2  CTCAATTCTTCAACGAATTAGAAAGGGCAATCTGCAAATTCATCTAGAAT  350

seq1  AACAAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAAAGAACCTC  400
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  AACAAAAAACCTAGGATAGCTAAAACTCTTCTCAAGGATAAAAGAACCTC  400

seq1  TGGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGA  450
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGGTGGAATCACCATGCCTGACCTAAAGCTGTACTACAGAGCAATTGTGA  450

seq1  TAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAAT  500
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAAAAACTGCATGGTACTGGTATAGTGACAGACAAGTAGACCAATGGAAT  500

seq1  AGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTT  550
      |     ||||||||||||||||||||||||||||||||||||||||||||
seq2  A-----GAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTT  545

seq1  CGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCATTTTCAACA  600
      |||||| ||||| |||||||||||| |||| |||||||||||||||||||
seq2  CGACAAAGGAGCAAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACA  595

seq1  ATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAA  639
      | ||||||||||||||||||| ||||||| |||||||||
seq2  AATGGTGCTGGCACAACTGGTGGTTATCAAGTAGAAGAA  634

seq1: chr10_103111341_103112500
seq2: B6Ng01-151B07.g_69_1202

seq1  GAATTCCATATGCAGAACTAATTGCTCTCTTTTCTGGGATTTCTCTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATGCAGAACTAATTGCTCTCTTTTCTGGGATTTCTCTATTC  50

seq1  GATTATATATACATTAAACGATTATTTATTGAAATTTTCACTCAGCCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATATATACATTAAACGATTATTTATTGAAATTTTCACTCAGCCTAC  100

seq1  TAGACTCTGAAGAGAAAAAAATGTGTCTTAGTAATATTTATTTATGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCTGAAGAGAAAAAAATGTGTCTTAGTAATATTTATTTATGTATT  150

seq1  TATTTTTATCTATTTTATTTATTTATTTATTTTTGTTTTTCTTTTTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTATCTATTTTATTTATTTATTTATTTTTGTTTTTCTTTTTTTCA  200

seq1  AACCAGATACAATTCAGAATTTTATTTTCTTTTTAAATAAAAAAACAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGATACAATTCAGAATTTTATTTTCTTTTTAAATAAAAAAACAAAA  250

seq1  CAAAACAAAACAAAATCAAATTTTTTATGTATGAGTACACTGTCTCTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAACAAAATCAAATTTTTTATGTATGAGTACACTGTCTCTGTC  300

seq1  TTCAGACATACTAGAGGAGGGCATGCGATTCCATTACATATGGTTGTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACATACTAGAGGAGGGCATGCGATTCCATTACATATGGTTGTGAG  350

seq1  CCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCCTGAAGAGCAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCCTGAAGAGCAGTC  400

seq1  AATGCTCTTAACCACTGAACGATCTCTCCAGCCTGAATTTTATTTTCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCTTAACCACTGAACGATCTCTCCAGCCTGAATTTTATTTTCTTA  450

seq1  AACAAACATAAAGCCCCAAATCCTTTTTAATGTATACGGGTCTTTCCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACATAAAGCCCCAAATCCTTTTTAATGTATACGGGTCTTTCCCTG  500

seq1  CATGTATGTCTGCACATCACCTACATATCTGGAACCCAGACGACAGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATGTCTGCACATCACCTACATATCTGGAACCCAGACGACAGGAGA  550

seq1  GGACATCAGATATCTTGGAATTTAGAGGCCAGAAGAGAACATCAAATGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCAGATATCTTGGAATTTAGAGGCCAGAAGAGAACATCAAATGCC  600

seq1  CTGAAACTGGAGTTACAGACAGTTGTGAGCTGCCACGTGAGTGCTGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACTGGAGTTACAGACAGTTGTGAGCTGCCACGTGAGTGCTGAGAA  650

seq1  TCGAATCTGGGTCCTCTGGAGAGAAGCAAGTGCTCTTAACTATTGATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAATCTGGGTCCTCTGGAGAGAAGCAAGTGCTCTTAACTATTGATTCA  700

seq1  TTTGGTTTTTCGAGACAGGGTTTCTCTGTGTCGCCCTGGCTGTCCTGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTTCGAGACAGGGTTTCTCTGTGTCGCCCTGGCTGTCCTGGAA  750

seq1  CTCACTTTGTAGACCAGGCTGGCCTCAAATTCAGAAATCTGCCTGCCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTTGTAGACCAGGCTGGCCTCAAATTCAGAAATCTGCCTGCCTTT  800

seq1  GCCTCCCAAGAGCTGGAATTAAAGGCATGTGCCACCACGCCCAGCTTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCAAGAGCTGGAATTAAAGGCATGTGCCACCACGCCCAGCTTGTG  850

seq1  ATTTTTTTTTTAATTTGTAAAAATTTTACATGTGCAAATTTACATGGATG  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATTTTTTTTTTAATTTGTAAAAATTTTACATGTGC-AATTTACATGGATG  899

seq1  TTCCTCTCCCTCCTATTGTGTATATGTATGTACAGATACAAAATCTGGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTCCCTCCTATTGTGTATATGTATGTACAGATACAAAATCTGGTA  949

seq1  AGTCTGTTTAATATTGCTTATATTATATGTTTTATGGATAACCCTGCGGT  1000
      ||||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  AGTCTGTTTAATATTGCTTATATTATATGTTTTATGGAT-ACCCTGC-GT  997

seq1  AGTGGAAAACAAAAGGAAAAGAAATTCTCCC-CCTCTCAGTATCATCCAT  1049
      ||| ||||||  || |||||| ||||||||| ||||||||||||||||| 
seq2  AGT-GAAAAC--AACGAAAAG-AATTCTCCCTCCTCTCAGTATCATCCA-  1042

seq1  TACTCATAGCTCTTCATCTATGGGTGGAACCTTGTTGGATCCCCCATCCA  1099
      ||||||||||   |||||||| ||||||  ||   ||||| |||||||| 
seq2  TACTCATAGCCTCTCATCTAT-GGTGGA--CT--GTGGATTCCCCATCC-  1086

seq1  ACAGGCCATGCCAACTGGTGGTGTTATTTTTTTTTTTTTTTAGATCTTTT  1149
      ||||| |||||  |||||||  | ||||||||||||      ||||||| 
seq2  ACAGG-CATGC--ACTGGTG--GGTATTTTTTTTTT------GATCTTT-  1124

seq1  GGTGCAGCTTC  1160
       | ||||||||
seq2  -GGGCAGCTTC  1134