BAC Information

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BAC

Clone NameB6Ng01-151K03
Chromosome2 (Build37)
Map Location 114,433,985 - 114,435,182
singlet/doubletsinglet
Overlap geneAtpbd4
Upstream geneFmn1, Grem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1, Aqr, Zfp770
Downstream geneLOC100043219, LOC100043222, LOC100043232, LOC100043236, BC052040
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151K03.bB6Ng01-151K03.g
ACCDH947404DH947405
length1,1931,167
definitionDH947404|Mus musculus domesticus DNA, BAC clone: B6Ng01-151K03, 5' end.DH947405|Mus musculus domesticus DNA, BAC clone: B6Ng01-151K03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgaactctgaatgttaggccacagtttgtgcaaagacagag
tgcaggcaagatggtgacattctgttcgtattatcatcaagaggctgagg
caggaggatacagtgtgtgaggctagcctgagacatggacacacacacac
acacacacacacacacacacacacacagagagagagaagcttaatataaa
atagggctctctacacgtgggctttgctttgttttgttgtagtttaactg
aacgttctgtcgtctgtagcatacactacacactgcttcaataccactca
gccttctgctgttttgcatcctcttcacaccttattttgaacctttgaac
aaactatttgaggacttttggttttgtgagttttgttttgttttgttttg
ttttgcttgtttatttgtcgtttttttctcagtagaataaagaagaaata
cttgcaaaggaaacaaacatttatagtattgcagaatacacatttgcttt
ctaggtcatatcttctgctgttcgtatctgcttttgcagtttacctttag
gactctgccacaaaactgagtggtgcctggcagcgaggaggctgcgggaa
ggaagggcacccgagaactcaggcttatgagcctttgagtatacagcacc
acgggatttatgcttgcaataatcagggctctctgaaagggccatccttg
gtaccagtgccattattgtagacatgagaaacctggtaaagctcagggca
tgttaattcgtaaactttactctctgattcatgagcttattttatagtat
ttacaatatgatggtaatttgtacataaacccttttgccttgaagacaag
cctgactttttactttttttttctttctttacttttgtgcagtcatttat
ttagcagagatttcttgtagaagaatagagttatttattcactaggatct
taaaaagaaagacatttctttattcacagttaagtaaaatatctccttgt
atggctacattttagaatactgattaagtgtggctaccatatttgccatg
ataatatatcagtttataccagaatatgtttgctttgggcctgtaaagaa
gaggtctgccttttcctctcagcagctgtgtttagtccagctatcttcag
cctcagtgcaaggatggccaggctccatgtacacataggtagg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatgtacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagacaatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggcttccc
aatggaggagctagagaaagttcccaaggagctaagggatcttcacccta
taggtggacaacattatgaactaacagtatccctgagctctgactctagc
ttgctaatgtatcaaagaatggtctagtcggccatcacttgaatgaaagt
atgaacgcaaactttgtgtgtccgtataaggacgcgtagagccataggga
ctcacgtcgcgtcgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_114433985_114435182
seq2: B6Ng01-151K03.b_49_1241 (reverse)

seq1  CCTACACTATGTGTTCCAGTGGAG-CTGGCCATTCCTGCACTGAGGCTGA  49
      ||||| |||||||| |   ||||| |||||||| | ||||||||||||||
seq2  CCTAC-CTATGTGTAC--ATGGAGCCTGGCCATCCTTGCACTGAGGCTGA  47

seq1  AGATGGCTGTGACTTAACACAGCTGCTGAGA-GAAAGGGCAGACCTCTTC  98
      |||| |||| |||| |||||||||||||||| |||| |||||||||||||
seq2  AGATAGCTG-GACTAAACACAGCTGCTGAGAGGAAAAGGCAGACCTCTTC  96

seq1  TTTAACAGCCCAAGGC-AACATATTCTTGGGTATAAACTGATATATTATC  147
      ||||   |||||| || ||||||||||  |||||||||||||||||||||
seq2  TTTACAGGCCCAAAGCAAACATATTCT--GGTATAAACTGATATATTATC  144

seq1  ATGGCAAATATGGTAGCACAACCTTAATCAGTATGTCTAAAATGTAGCCA  197
      ||||||||||||||||| ||  |||||||||||| |||||||||||||||
seq2  ATGGCAAATATGGTAGC-CACACTTAATCAGTAT-TCTAAAATGTAGCCA  192

seq1  TACAAGGAGATATTTTACTTAACTGTGAATAAAGATATGTCTTTCTTTTT  247
      ||||||||||||||||||||||||||||||||||| ||||||||| ||||
seq2  TACAAGGAGATATTTTACTTAACTGTGAATAAAGAAATGTCTTTC-TTTT  241

seq1  TAAGGTTCTAGTGAATAAATAACTCTA-TCTTCTACAAGAAATCTCTGCT  296
      |||| | |||||||||||||||||||| ||||||||||||||||||||| 
seq2  TAAGATCCTAGTGAATAAATAACTCTATTCTTCTACAAGAAATCTCTGC-  290

seq1  TAAATAATTGACTGCACAAAAGTAAAGAAAGAAAAAAAAAGTAAAAAGTC  346
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATGACTGCACAAAAGTAAAGAAAGAAAAAAAAAGTAAAAAGTC  340

seq1  AGGCTTGTCTTCAAGGC-AAAGGGTTTATGTACAAATTACCATCATATTG  395
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGGCTTGTCTTCAAGGCAAAAGGGTTTATGTACAAATTACCATCATATTG  390

seq1  TAAATACTATAAAATAAGCTCATGAATCAGAGAGTAAAGTTTACGAATTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACTATAAAATAAGCTCATGAATCAGAGAGTAAAGTTTACGAATTA  440

seq1  ACATGCCCTGAGCTTTACCAGGTTTCTCATGTCTACAATAATGGCACTGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCCTGAGCTTTACCAGGTTTCTCATGTCTACAATAATGGCACTGG  490

seq1  TACCAAGGATGGCCCTTTCAGAGAGCCCTGATTATTGCAAGCATAAATCC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGGATGGCCCTTTCAGAGAGCCCTGATTATTGCAAGCATAAATCC  540

seq1  CGTGGTGCTGTATACTCAAAGGCTCATAAGCCTGAGTTCTCGGGTGCCCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTGCTGTATACTCAAAGGCTCATAAGCCTGAGTTCTCGGGTGCCCT  590

seq1  TCCTTCCCGCAGCCTCCTCGCTGCCAGGCACCACTCAGTTTTGTGGCAGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCCGCAGCCTCCTCGCTGCCAGGCACCACTCAGTTTTGTGGCAGA  640

seq1  GTCCTAAAGGTAAACTGCAAAAGCAGATACGAACAGCAGAAGATATGACC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAAAGGTAAACTGCAAAAGCAGATACGAACAGCAGAAGATATGACC  690

seq1  TAGAAAGCAAATGTGTATTCTGCAATACTATAAATGTTTGTTTCCTTTGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGCAAATGTGTATTCTGCAATACTATAAATGTTTGTTTCCTTTGC  740

seq1  AAGTATTTCTTCTTTATTCTACTGAGAAAAAAACGACAAATAAACAAGCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTCTTCTTTATTCTACTGAGAAAAAAACGACAAATAAACAAGCA  790

seq1  AAACAAAACAAAACAAAACAAAACTCACAAAACCAAAAGTCCTCAAATAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAACAAAACAAAACTCACAAAACCAAAAGTCCTCAAATAG  840

seq1  TTTGTTCAAAGGTTCAAAATAAGGTGTGAAGAGGATGCAAAACAGCAGAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCAAAGGTTCAAAATAAGGTGTGAAGAGGATGCAAAACAGCAGAA  890

seq1  GGCTGAGTGGTATTGAAGCAGTGTGTAGTGTATGCTACAGACGACAGAAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGTGGTATTGAAGCAGTGTGTAGTGTATGCTACAGACGACAGAAC  940

seq1  GTTCAGTTAAACTACAACAAAACAAAGCAAAGCCCACGTGTAGAGAGCCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTTAAACTACAACAAAACAAAGCAAAGCCCACGTGTAGAGAGCCC  990

seq1  TATTTTATATTAAGCTTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATATTAAGCTTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTG  1040

seq1  TGTGTGTGTGTGTGTCCATGTCTCAGGCTAGCCTCACACACTGTATCCTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTCCATGTCTCAGGCTAGCCTCACACACTGTATCCTC  1090

seq1  CTGCCTCAGCCTCTTGATGATAATACGAACAGAATGTCACCATCTTGCCT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCAGCCTCTTGATGATAATACGAACAGAATGTCACCATCTTGCCT  1140

seq1  GCACTCTGTCTTTGCACAAACTGTGGCCTAACATTCAGAGTTCAAAAGAA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTGTCTTTGCACAAACTGTGGCCTAACATTCAGAGTTCAAAAGAA  1190

seq1  TTC  1198
      |||
seq2  TTC  1193