BAC Information

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BAC

Clone NameB6Ng01-151M01
Chromosome2 (Build37)
Map Location 48,346,036 - 48,494,363
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383691, LOC100041457
Downstream geneLOC383692, Acvr2a, Orc4l, LOC100041508, Mbd5, LOC100042719, LOC666709, LOC435666, Epc2, Kif5c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151M01.bB6Ng01-151M01.g
ACCDH947493DH947494
length1,1041,147
definitionDH947493|Mus musculus domesticus DNA, BAC clone: B6Ng01-151M01, 5' end.DH947494|Mus musculus domesticus DNA, BAC clone: B6Ng01-151M01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,493,244 - 48,494,363)(48,346,036 - 48,346,801)
sequence
gaattcttgtcattttcatgttatgcctgtagatactgagatacaaatca
agtcaagcttatgcagggcataagtagtaaaaccaagacattgcctgtgt
ctgtgttattccccatccttatgaactaataaggaatttaactccttact
gtactgtgggaagatccaagacaacaaatgaaaccagataaaggccactc
agagattttcagatgggcagggggagagtcaagcaggatgctggcatcca
gtgaatcgtagctgatgaactgtcaagggtggggagaggcgacaactgtc
tgggtaactaagagccgccatacagcatagcacccccatttgcactattt
ctagtattaaattttctagtcctcaagatgaagaaggtgagaattacttt
ccttcacaattatgctacttgaaagagtagttgccgctctctgctgtcat
gtctctcttaaggtttagagcttcagactgactcccagcctgtgccttgg
ccaaggagtgactcggtggccactaccagtgggttctgtgtagtccttac
tgctttgtgttaaatgcttctaccttttattaaacataccttttgtagac
ccactcactctgggctcctccctttgtctctatatttatagaagcagaat
cctatggccatttcaaatgtctctgcggtttccctctctctctctctctc
tctctctctctctctcaactttgaatgataaaaatgctgtttgtgtagcc
tctgactagtagtatagaacatgaaactctgaagtggagttggtaacttt
cttctttggagtccacgtggcagtttctttgaaatctgtgaggtaagtca
ttgctacttttaacgtgcggataaggaagcaagagtcatagagaaatgag
catatatgaggcctctggattaaaatatgagatgccctgggcattgggta
ccacagcaagcgtttctctgactgccttgtgctgcttcgtatactcacaa
attgtgcactgtgggatcatagtttcacctgtaataacacagtgtattgc
attatctgtggtactgtgtgtatttattacttatgcctttggacacaaca
gaac
gaattcatacagttgaatccttcttaacagtctgtgttgtgggaacactt
cataaccgcgacccgcagttctggttctggaatgagggatcttccttgca
ccggtgatggtaaactctcgtcccgagttttttctcgtcccggaattcgg
caccaattgttattagacgcgttctcacgcccggccaggaagaacaccac
agaccagaatcttctgcggcaaaactttattgcttacatcttcaggagca
agagtgtaagaagcaagagagagagaaaacgaaaccccgtccctatttta
ggagagttatccctcgcctcggacgtgtcactccctgattggctgcagcc
catcggccgagttgacgtcacggggaaggcagagcacatggagtgaagaa
ccaccctcggcacatgcgcagattatttgtttaccacttagaacacagct
gtcagcgccatcttgtaacggcgaatgtgggcgcggctcccaacaataaa
attgcaaagcttctgcaaagcaaaagacaccgtcaataagacaaaaaggc
caccaacagattgggaaaggatctttacctatcccaaatcggatagggga
ctaatatccaatatatataaagaactcaagaaggtggactccagaaaatc
aaataaccccattaaaaaatggggctcagagctgaacaaggaattctcac
ctgaggaatactgaatggctgagaagcacctgaaaaaatgttcaacatcc
ttaatcatcagggaaatgcaaatcaaaacaaccctgagattccacttcac
tccagtcagaatggctaagatcaaaaactcaggtaacagcagatgctggc
gaggatgtggagaaaggggaacactccaccatacctgttctgttgaggat
actaaggaccaaaggtctcacgttccctaacacttaagtagcactcagag
aaaactaggggcccaaccaatggtcagactcttctcctctggcaactttc
tttcacatgtacttcccacagcacaggaattaattaataaagttctttgt
atgctgcagtatgagctcagaagaaactgcactttcactttcttgattct
tgattatcccttagaaagcgcgcaccataacatcttgtcggtttcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_48493244_48494363
seq2: B6Ng01-151M01.b_43_1146 (reverse)

seq1  GTTCTGTTGTGTCCCAAAAGCAATAATAGTAAATAAATAACACACAAGTA  50
      ||||||||||||||  ||||  |||  ||| ||||||| |||||| ||||
seq2  GTTCTGTTGTGTCC--AAAGGCATA--AGT-AATAAAT-ACACAC-AGTA  43

seq1  CCAACAGAATAAATGCAAATTACACCCTGTGTTATTACAGGTGAAACTAT  100
      || |||||   |||||||  ||||  ||||||||||||||||||||||| 
seq2  CC-ACAGA--TAATGCAA--TACA--CTGTGTTATTACAGGTGAAACTA-  85

seq1  TGATCCCACAGTGCACAATTTGTGAGTTATACGAAGCAGCACAAGGCAGT  150
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGATCCCACAGTGCACAATTTGTGAG-TATACGAAGCAGCACAAGGCAGT  134

seq1  CAGAGAAACGCTTGCTGTGGTACCCAATGCCCAGGGCATCTCATATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAACGCTTGCTGTGGTACCCAATGCCCAGGGCATCTCATATTTTA  184

seq1  ATCCAGAGGCCTCATATATGCTCATTTTCTCTATGACTCTTGCTTCCTTA  250
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATCCAGAGGCCTCATATATGCTCA-TTTCTCTATGACTCTTGCTTCCTTA  233

seq1  TCCGCACGTTAAAAGTAGCAATGACTTACCTCACAGATTTCAAAG-AACT  299
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCCGCACGTTAAAAGTAGCAATGACTTACCTCACAGATTTCAAAGAAACT  283

seq1  GCCACGTGGACTCCAAAGAAGAAAGTTACCAACTCCACTTCAGAGTTTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACGTGGACTCCAAAGAAGAAAGTTACCAACTCCACTTCAGAGTTTCA  333

seq1  TGTTCTATACTACTAGTCAGAGGCTACACAAACAGCATTTTTATCATTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATACTACTAGTCAGAGGCTACACAAACAGCATTTTTATCATTCA  383

seq1  AAGTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAACCGCAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAACCGCAGA  433

seq1  GACATTTGAAATGGCCATAGGATTCTGCTTCTATAAATATAGAGACAAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTGAAATGGCCATAGGATTCTGCTTCTATAAATATAGAGACAAAG  483

seq1  GGAGGAGCCCAGAGTGAGTGGGTCTACAAAAGGTATGTTTAATAAAAGGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGCCCAGAGTGAGTGGGTCTACAAAAGGTATGTTTAATAAAAGGT  533

seq1  AGAAGCATTTAACACAAAGCAGTAAGGACTACACAGAACCCACTGGTAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCATTTAACACAAAGCAGTAAGGACTACACAGAACCCACTGGTAGT  583

seq1  GGCCACCGAGTCACTCCTTGGCCAAGGCACAGGCTGGGAGTCAGTCTGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCGAGTCACTCCTTGGCCAAGGCACAGGCTGGGAGTCAGTCTGAA  633

seq1  GCTCTAAACCTTAAGAGAGACATGACAGCAGAGAGCGGCAACTACTCTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAAACCTTAAGAGAGACATGACAGCAGAGAGCGGCAACTACTCTTT  683

seq1  CAAGTAGCATAATTGTGAAGGAAAGTAATTCTCACCTTCTTCATCTTGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAGCATAATTGTGAAGGAAAGTAATTCTCACCTTCTTCATCTTGAG  733

seq1  GACTAGAAAATTTAATACTAGAAATAGTGCAAATGGGGGTGCTATGCTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGAAAATTTAATACTAGAAATAGTGCAAATGGGGGTGCTATGCTGT  783

seq1  ATGGCGGCTCTTAGTTACCCAGACAGTTGTCGCCTCTCCCCACCCTTGAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCGGCTCTTAGTTACCCAGACAGTTGTCGCCTCTCCCCACCCTTGAC  833

seq1  AGTTCATCAGCTACGATTCACTGGATGCCAGCATCCTGCTTGACTCTCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATCAGCTACGATTCACTGGATGCCAGCATCCTGCTTGACTCTCCC  883

seq1  CCTGCCCATCTGAAAATCTCTGAGTGGCCTTTATCTGGTTTCATTTGTTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCATCTGAAAATCTCTGAGTGGCCTTTATCTGGTTTCATTTGTTG  933

seq1  TCTTGGATCTTCCCACAGTACAGTAAGGAGTTAAATTCCTTATTAGTTCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGATCTTCCCACAGTACAGTAAGGAGTTAAATTCCTTATTAGTTCA  983

seq1  TAAGGATGGGGAATAACACAGACACAGGCAATGTCTTGGTTTTACTACTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATGGGGAATAACACAGACACAGGCAATGTCTTGGTTTTACTACTT  1033

seq1  ATGCCCTGCATAAGCTTGACTTGATTTGTATCTCAGTATCTACAGGCATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTGCATAAGCTTGACTTGATTTGTATCTCAGTATCTACAGGCATA  1083

seq1  ACATGAAAATGACAAGAATTC  1120
      |||||||||||||||||||||
seq2  ACATGAAAATGACAAGAATTC  1104

seq1: chr2_48346036_48346801
seq2: B6Ng01-151M01.g_453_1213

seq1  CATGGAGTGAAGAACCACCCTCGGCACATGCGCAGATTATTTGTTTACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGTGAAGAACCACCCTCGGCACATGCGCAGATTATTTGTTTACCA  50

seq1  CTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGCGCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGCGCGG  100

seq1  CTCCCAACAATAAAATTGCAAAGCTTCTGCAAAGCAAAAGACACCGTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAACAATAAAATTGCAAAGCTTCTGCAAAGCAAAAGACACCGTCAA  150

seq1  TAAGACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCTATCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCTATCCCA  200

seq1  AATCGGATAGGGGACTAATATCCAATATATATAAAGAACTCAAGAAGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGGATAGGGGACTAATATCCAATATATATAAAGAACTCAAGAAGGTG  250

seq1  GACTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTGAA  300

seq1  CAAGGAATTCTCACCTGAGGAATACTGAATGGCTGAGAAGCACCTGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAATTCTCACCTGAGGAATACTGAATGGCTGAGAAGCACCTGAAAA  350

seq1  AATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTG  400

seq1  AGATTCCACTTCACTCCAGTCAGAATGGCTAAGATCAAAAACTCAGGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCACTTCACTCCAGTCAGAATGGCTAAGATCAAAAACTCAGGTAA  450

seq1  CAGCAGATGCTGGCGAGGATGTGGAGAAAGGGGAACACTCCACCATACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGATGCTGGCGAGGATGTGGAGAAAGGGGAACACTCCACCATACCT  500

seq1  GTTCTGTTGAGGATAACTAAGGACCAAAGGTCTCACGTTCCCTAACACTT  550
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTGAGGAT-ACTAAGGACCAAAGGTCTCACGTTCCCTAACACTT  549

seq1  AAGTAGGCACTCAAGAAGAAAACTAGGGGCCCAACCAATGGTCAGGACTC  600
      ||||| |||||||   |||||||||||||||||||||||||||| |||||
seq2  AAGTA-GCACTCA--GAGAAAACTAGGGGCCCAACCAATGGTCA-GACTC  595

seq1  TCTCCCTCTGGCAACTTTCTTTCCACATGTACCTCACACAGCACCAGGGA  650
      |   |||||||||||||||||| ||||||||| || ||||||| ||||  
seq2  TTCTCCTCTGGCAACTTTCTTT-CACATGTACTTCCCACAGCA-CAGG--  641

seq1  AATAAATTAATAAAG-TCTTTGTAATGCTGCAGTATGAGCTCAGAAGAAA  699
      ||| ||||||||||| ||||||| ||||||||||||||||||||||||||
seq2  AATTAATTAATAAAGTTCTTTGT-ATGCTGCAGTATGAGCTCAGAAGAAA  690

seq1  CTGCAC-TTCACCTTC-TGA-TCCTGATTATCCCCTAAGGAAAGCGCGCA  746
      |||||| ||||| ||| ||| || |||||||||| ||  |||||||||||
seq2  CTGCACTTTCACTTTCTTGATTCTTGATTATCCCTTA--GAAAGCGCGCA  738

seq1  -CAT-ACATC-TGTCCGTTTCAG  766
       ||| ||||| |||| |||||||
seq2  CCATAACATCTTGTCGGTTTCAG  761