BAC Information

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BAC

Clone NameB6Ng01-151O01
ChromosomeX (Build37)2 (Build37)
Map Location 135,588,314 - 135,589,442142,776,146 - 142,776,671
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneIl1rapl2, 1700025D03Rik, Nrk
Downstream geneSerpina7, 4930513O06Rik, 4933428M09Rik, Mum1l1, LOC675062, Trap1a, C330013F16Rik, EG666359, D330045A20Rik, Rnf128, LOC622432, Tbc1d8b, Ripply1, Cldn2, Morc4, Rbm41, Gm719
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151O01.bB6Ng01-151O01.g
ACCDH947589DH947590
length1,1211,038
definitionDH947589|Mus musculus domesticus DNA, BAC clone: B6Ng01-151O01, 5' end.DH947590|Mus musculus domesticus DNA, BAC clone: B6Ng01-151O01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(135,588,314 - 135,589,442)(142,776,146 - 142,776,671)
sequence
gaattccttgacctatcagactttaatccaaccttaaagccactgatatt
gcatcttcacagccctttctacttctctgattatattaacttcctcagtg
attaaatatacctctgcctccctcttaaaagaacatttgtaacctggata
gttgaggataatctctccatctgaagattcttaattgtactcatttgcaa
ggtccctttcttcatataaattaaaattcataggttatacagtttaggat
attcacaactatgggaatccttagttaccctaccacaagaatcaatcaca
ttactacatttaactacccaggaataaatggaaattttagctgcccctca
ttggctgcacattttccagaattctccttcaccttgaagctaagaatact
acagagagctttcctccataaggtttgaaaaaatatataagataatgtat
gtaaaatgcttagcagagtaaacacatgacaaagcagattagccattgtt
attattccagcccactagtatgctggtatttatgcatgttctcccacttc
ctcttttgtttgtttttagaagctgaaatttttttattaactgtacatcg
ttacaccgagtgaatattaattctgtgttctcgtcgtctagatggcttaa
atgattttagctgctccttcatagattagattcaatcagcattttgtttt
catagtgatgtgcagcatgatgaggtgtgctaggaatagcaaatgtgcca
tctatgtcattttcccatttgcttcatttgcattattaaaattgtactct
gtccaaagatttttgtaggaatctcaaggtagttgtccatttagtagtta
gtgatttagcttaaaaaaaaaccaactagatggtacatccatatatttga
ctaacttggcatagatcaactataattatttctaatcagtttaaagtctt
gcaaaattgctccttcgtcaaagatctctggggtctaaggctaggtggag
gcatagtgtcaatgttatatagctattgtctgtagctttctagactgcta
aagtaaatgaacttcttcttttttctaacacttctcaggaaggtttctta
tacacacatgattgaagaaca
gaattctttgtttagctctgttccccatttttaatagggttatttgattt
tctggagtccattttctttatatatattggatattagtcccctatttgat
ttaggattggtaaagatcctttcccaatctattggtggcctttttttttc
ttattgacagtgtcttttgccttatagaagctttgcaattttatgaggtc
ccatttgtcaattctcgatcttacagcacaagccattgctgttctgttca
gaaaatttccccctgtgcccatatcttcaaggcttttccccactttctcc
tctataagtttcagtgtctctggttttatgtggagttccttgatccactt
agtcttgagctttttacaaggagatgagaatggatcaatctgcattcttc
tacacactacaagccagttgtgccagcaccatttgttttccactggatgg
ttttagctcccctgtcaaagatcaagtgaccataggtgtgtgggttcatt
tccattggtctacttgtctgttgttataccagtaccatgcagtttttatc
acaattgctctgtagtacagctttaggtcaggcatggtgaatccaccaga
ggttcttttattgttgagaagagtttttgctatcctaggttttttgttat
tccagatgaatttgcagattgctctttctaattcattgaagaattgagtt
ggaattttgatggggattgcactgaatctgtagattgcttttggcaagat
agccatttttacaatgttgatcctgccaatccatgagcatgggagatctt
tccatcttctgagatcttcttcaatttctttcttcagagacttgaagttc
taatcatacagatcttcacttccttagttagagtcacgctaagtatttat
atatttgtgactattgagaaggtgttgtttccctaattctttctcagctg
ttatctttgtgtagaagaaaggccattgactggtttgagttattattatc
agctactgccctgagctgtttatcaggttaggagttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_135588314_135589442
seq2: B6Ng01-151O01.b_47_1167

seq1  GAATTCCTTGACCTATCAGACTTTAATCCAACCTTAAAGCCACTGATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGACCTATCAGACTTTAATCCAACCTTAAAGCCACTGATATT  50

seq1  GCATCTTCACAGCCCTTTCTACTTCTCTGATTATATTAACTTCCTCAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTCACAGCCCTTTCTACTTCTCTGATTATATTAACTTCCTCAGTG  100

seq1  ATTAAATATACCTCTGCCTCCCTCTTAAAAGAACATTTGTAACCTGGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATATACCTCTGCCTCCCTCTTAAAAGAACATTTGTAACCTGGATA  150

seq1  GTTGAGGATAATCTCTCCATCTGAAGATTCTTAATTGTACTCATTTGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGATAATCTCTCCATCTGAAGATTCTTAATTGTACTCATTTGCAA  200

seq1  GGTCCCTTTCTTCATATAAATTAAAATTCATAGGTTATACAGTTTAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTTTCTTCATATAAATTAAAATTCATAGGTTATACAGTTTAGGAT  250

seq1  ATTCACAACTATGGGAATCCTTAGTTACCCTACCACAAGAATCAATCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAACTATGGGAATCCTTAGTTACCCTACCACAAGAATCAATCACA  300

seq1  TTACTACATTTAACTACCCAGGAATAAATGGAAATTTTAGCTGCCCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTACATTTAACTACCCAGGAATAAATGGAAATTTTAGCTGCCCCTCA  350

seq1  TTGGCTGCACATTTTCCAGAATTCTCCTTCACCTTGAAGCTAAGAATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGCACATTTTCCAGAATTCTCCTTCACCTTGAAGCTAAGAATACT  400

seq1  ACAGAGAGCTTTCCTCCATAAGGTTTGAAAAAATATATAAGATAATGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGCTTTCCTCCATAAGGTTTGAAAAAATATATAAGATAATGTAT  450

seq1  GTAAAATGCTTAGCAGAGTAAACACATGACAAAGCAGATTAGCCATTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATGCTTAGCAGAGTAAACACATGACAAAGCAGATTAGCCATTGTT  500

seq1  ATTATTCCAGCCCACTAGTATGCTGGTATTTATGCATGTTCTCCCACTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCCAGCCCACTAGTATGCTGGTATTTATGCATGTTCTCCCACTTC  550

seq1  CTCTTTTGTTTGTTTTTAGAAGCTGAAATTTTTTTATTAACTGTACATCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTGTTTGTTTTTAGAAGCTGAAATTTTTTTATTAACTGTACATCG  600

seq1  TTACACCGAGTGAATATTAATTCTGTGTTCTCGTCGTCTAGATGGCTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACCGAGTGAATATTAATTCTGTGTTCTCGTCGTCTAGATGGCTTAA  650

seq1  ATGATTTTAGCTGCTCCTTCATAGATTAGATTCAATCAGCATTTTGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTAGCTGCTCCTTCATAGATTAGATTCAATCAGCATTTTGTTTT  700

seq1  CATAGTGATGTGCAGCATGATGAGGTGTGCTAGGAATAGCAAATGTGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGATGTGCAGCATGATGAGGTGTGCTAGGAATAGCAAATGTGCCA  750

seq1  TCTATGTCATTTTCCCATTTGCTTCATTTGCATTATTAAAATTGTACTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTCATTTTCCCATTTGCTTCATTTGCATTATTAAAATTGTACTCT  800

seq1  GTCCAAAGATTTTTGTAGGAATCTCAAGGTAGTTGTCCATTTAGTAGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAAGATTTTTGTAGGAATCTCAAGGTAGTTGTCCATTTAGTAGTTA  850

seq1  GTGATTTAGCTTAAAAAAAAACCAACTAGATGGTACATCCATATATTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTAGCTTAAAAAAAAACCAACTAGATGGTACATCCATATATTTGA  900

seq1  CTAACTTGGCATAGATCAACTATAATTATTTCTAATCAGTTTAAAGTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTGGCATAGATCAACTATAATTATTTCTAATCAGTTTAAAGTCTT  950

seq1  GCAAAATTGCTCCTTCGTCAAAAGATCTCTGGGGTCTAAGGGCTAGGTGG  1000
      ||||||||||||||||||| ||||||||||||||||||| ||||||||||
seq2  GCAAAATTGCTCCTTCGTC-AAAGATCTCTGGGGTCTAA-GGCTAGGTGG  998

seq1  AGGCATTAGTGTCAATG-TATATAGCTATTGTCTGTAAGCTTTCTAAGAC  1049
      ||||| ||||||||||| |||||||||||||||||| |||||||| ||||
seq2  AGGCA-TAGTGTCAATGTTATATAGCTATTGTCTGT-AGCTTTCT-AGAC  1045

seq1  TGCTAAAGGTAAATGTACTTCTTCCTTTTTTCTTACACTTCTCAGGGAAG  1099
      ||||||| ||||||| ||||||| ||||||||| |||||||||||| | |
seq2  TGCTAAA-GTAAATGAACTTCTT-CTTTTTTCTAACACTTCTCAGGAAGG  1093

seq1  TTTCTTATACACACAATGAATGGAAGAACA  1129
      |||||||||||||| ||| || ||||||||
seq2  TTTCTTATACACAC-ATG-ATTGAAGAACA  1121

seq1: chr2_142776146_142776671
seq2: B6Ng01-151O01.g_593_1105 (reverse)

seq1  AGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAAA  50
      ||||||||| ||||||||||||||| || | | ||||||||   |||| |
seq2  AGAACTCCT-AACCTGATAAACAGC-TCAGGGCAGTAGCTG---ATAATA  45

seq1  TAAACTCAAACAAGTCAATGGCCTTTC-TCTATACAAAGAATAAACAGGC  99
        ||||||||| ||||||||||||||| |||| |||||||   |||| ||
seq2  ATAACTCAAACCAGTCAATGGCCTTTCTTCTACACAAAGA--TAACA-GC  92

seq1  TGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATA  149
      |||||||| |||||||||||||||| |||||||||||||||||||| |||
seq2  TGAGAAAG-AATTAGGGAAACAACA-CCTTCTCAATAGTCACAAAT-ATA  139

seq1  TAAAATATCTCGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGAT  199
      | ||||| ||  ||||||||||||||||||||||| ||||||||||||||
seq2  T-AAATA-CTTAGCGTGACTCTAACTAAGGAAGTG-AAGATCTGTATGAT  186

seq1  AAAAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATG  249
       | ||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAGAACTTCAAGTCTCTGAAGAAAGAAATTGAAGAAGATCTCAGAAGATG  236

seq1  GAAGGATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGG  299
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGG  286

seq1  CTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATT  349
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTATCTTGCCAAAAGCAATCTACAGATTCAGTGCAATCCCCATCAAAATT  336

seq1  CCAACTCAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTG  399
      ||||||||||||||||| ||||||||| ||||||| ||||||||||||||
seq2  CCAACTCAATTCTTCAATGAATTAGAAAGAGCAATCTGCAAATTCATCTG  386

seq1  GAATAACAAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAAAGAA  449
      ||||||||||||||||||||||||||||| |||||||||  |||||||||
seq2  GAATAACAAAAAACCTAGGATAGCAAAAACTCTTCTCAACAATAAAAGAA  436

seq1  CCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATT  499
      ||||||||||| |||||||||||||||||||||| |||||||||||||||
seq2  CCTCTGGTGGATTCACCATGCCTGACCTAAAGCTGTACTACAGAGCAATT  486

seq1  GTGATAAAAACTGCATGGTACTGGTAT  526
      |||||||||||||||||||||||||||
seq2  GTGATAAAAACTGCATGGTACTGGTAT  513