BAC Information

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BAC

Clone NameB6Ng01-151P02
Chromosome2 (Build37)
Map Location 120,358,089 - 120,481,487
singlet/doubletdoublet
Overlap geneZfp106, Snap23, Lrrc57, Cep27, Stard9
Upstream geneExdl1, 1500003O03Rik, LOC100043307, Oip5, Nusap1, Ndufaf1, LOC625328, LOC100043622, Rtf1, Itpka, Ltk, Rpap1, Tyro3, 6330405D24Rik, LOC625403, Mga, Mapkbp1, Pla2g4b, Spnb5, Ehd4, Pla2g4e, LOC100043635, Pla2g4d, Pla2g4f, Vps39, Tmem87a, Ganc, Capn3
Downstream geneCdan1, Ttbk2, Ubr1, Tmem62, Rnu3b-ps2, Ccndbp1, Epb4.2, Tgm5, LOC640543, Lcmt2, Adal, Zscan29, D2Ertd435e, Trp53bp1, Mtap1a, Hisppd2a, Ckmt1, Strc, Catsper2, Pdia3, Ell3, Serf2, LOC574418, 2310003F16Rik, Mfap1b, Wdr76p, Mfap1a, Wdr76, Frmd5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151P02.bB6Ng01-151P02.g
ACCDH947639DH947640
length1,1101,074
definitionDH947639|Mus musculus domesticus DNA, BAC clone: B6Ng01-151P02, 5' end.DH947640|Mus musculus domesticus DNA, BAC clone: B6Ng01-151P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,480,366 - 120,481,487)(120,358,089 - 120,359,174)
sequence
gaattcacactgtagaccaggctggcctctaactcagaaatccgcctgca
tctgcctcccaagtgctgggattaaaggcatgcaccaccaccgcccagct
cccctgctgcatcttatagatcagatttgatgctgcagcagatactatca
gtgccctagccacacacacacacctggatcccttcactattcctaagaat
gccagcctactagtaagtaggtttcactcttaaaaggtggtacacctgtc
taagggctgtactcaggttatgggaactctgtttaccagccagaggttct
atatggcaatttcaagcaatagtccaggtgagaaaaatctaaaggaaaca
attactgacaaggaaaatccactgtgtataaaatacagcctagtagaatt
agaccttctaagtgtcccttgtgtagctagctaccctgtaggtatgaaga
tattctaaagagattctggtggctacctttggctctctgactgagacaat
aggctccaagaaattagaactttttgagaactcccaatctgggagaaaga
aaaggctgaagcctggttcatacaggttgttaggtcaccttctaagagag
aaaagagcttagacaatgcggtggaggggaccacatctgactaccccgga
tttgctatttaagtctgacttgcccttctatgtaaacctgaacctcaggt
caggatccgcaaggtcattttggaggtgggggatcattggacctccttgt
tcctcttcccaatgtggccacattgactcaatctcccctttctgcttctc
accattacatgggttattctctaactgacctactgaggacacctggtgga
gcctagcttgttaagactgctctgaccccaaccctgagtgacacttgctc
agctcccttcctggctgggcctcccactcttcattccacctggcatattt
ctagaaactgctttcccagtagcaggtctgctagcacagaacactgaaaa
ttatgggcccacgtttaataaaaggctatgtgtcactgtaaaccagccca
ggatcagactcagatgactcttatagcctcagctctacagctcaacctgt
ctgtctgtct
gaattccagagcgaggtagagagtactgcagcagcagcacaggcactcaa
tccaaactgtgcagctacaaggatgcaagtagattagtgacaactgctcc
cctcccaaatagagatctttgtcttcaataaacattttaaaagcaaagaa
accagcttaccaagtactcacaaccattaagcaggtctctaagctttctg
ctttaccagaccatgaactttgcaaaaggactaagaaaggaaaacaaggc
aaatgaaccaacaacagtaaagtccctgagcctggagggctacacttaca
tcgttgcaaaactatgattttccgccgccgggcgtggtggcgcacgcctt
taatcccagcactcgggaggcagaggcaggcggatttctgagttcgaggc
caacctggtctacaaagtgagctccaggacagccagggctatacagagaa
accctgtctcgaaaaaccaaaaaaaaaaaaaaaaaaaaaaaaaactatga
ttttccaagttgaacctatgctgagcacttcttgaccacttagaacagca
tctcaagatgctctgagtgagcttaagagaaagcattctgcagtcctctc
tgtagtacccagaatgcctatgggggattccacaagctcagtgaaaggta
gtaacaacaggtagttgaaaaaattgaccactagcagggcggtggtggca
catgcctttaatctcaggcaaaagcaggccttctctgagttcgaggccag
tctgttctatagaccagacagggctatatagagaaaccccatcttgaaaa
ccaaaaagcaagcaagcaaacaaatcaaaaatttttaccattggttccaa
acattaagattcagagacagcacattctagtccatctgaactaaagtgac
agatttctgatgacgtatgtaatcctaggtccaattagtgttcagtgcct
caattttaatggcatctctgtcagacagactatcacacgtgtcatatagg
aacagcagtgcctaatactgattaaagcgacatctacaatgggtattttt
gcaagttaattaagttgaacaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_120480366_120481487
seq2: B6Ng01-151P02.b_50_1159 (reverse)

seq1  AGACAGACAGACAGG-TGAGCTGTAGAGCTGAGGCTATTTAGAGTCATCT  49
      ||||||||||||||| ||||||||||||||||||||| | ||||||||||
seq2  AGACAGACAGACAGGTTGAGCTGTAGAGCTGAGGCTA-TAAGAGTCATCT  49

seq1  GTGTCTGAATCCTGGGCTTGTTTTTACAGTGACACATAGCCTTTTTATTT  99
      | ||||| |||||||||| |  |||||||||||||||||||||||   ||
seq2  GAGTCTG-ATCCTGGGCTGG--TTTACAGTGACACATAGCCTTTT--ATT  94

seq1  AAACGTGGGCCCATAATTTTTTCAGTGGTTTCTGTGCTAGCAGACCCTGC  149
      ||||||||||||||||  |||||||||  ||||||||||||||| |||||
seq2  AAACGTGGGCCCATAA--TTTTCAGTG--TTCTGTGCTAGCAGA-CCTGC  139

seq1  TACTGGGAAAGCAGTTTTCTAGAAATATTGCCAGGTGGAATGAAGGAGTG  199
      |||||||||||||| |||||||||||| |||||||||||||||| |||||
seq2  TACTGGGAAAGCAG-TTTCTAGAAATA-TGCCAGGTGGAATGAA-GAGTG  186

seq1  GGAGGCCCAGCCAGGAAGGGAGCTGAGCAAGTGTCACTCAGGGTTGGGGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCCAGCCAGGAAGGGAGCTGAGCAAGTGTCACTCAGGGTTGGGGT  236

seq1  CAGAGCAGTCTTAACAAGCTAGGCTCCACCAGGTGTCCTCAGTAGGTCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAGTCTTAACAAGCTAGGCTCCACCAGGTGTCCTCAGTAGGTCAG  286

seq1  TTAGAGAATAA-CCATGTAATGGTGAGAAGCAGAAAGGGGAGATTGAGTC  348
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAATAACCCATGTAATGGTGAGAAGCAGAAAGGGGAGATTGAGTC  336

seq1  AATGTGGCCACATTGGGAAGAGGAACAAGGAGGTCCAATGATCCCCCACC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGCCACATTGGGAAGAGGAACAAGGAGGTCCAATGATCCCCCACC  386

seq1  TCCAAAATGACCTTGCGGATCCTGACCTGAGGTTCAGGTTTACATAGAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAATGACCTTGCGGATCCTGACCTGAGGTTCAGGTTTACATAGAAG  436

seq1  GGCAAGTCAGACTTAAATAGCAAATCCGGGGTAGTCAGATGTGGTCCCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTCAGACTTAAATAGCAAATCCGGGGTAGTCAGATGTGGTCCCCT  486

seq1  CCACCGCATTGTCTAAGCTCTTTTCTCTCTTAGAAGGTGACCTAACAACC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCGCATTGTCTAAGCTCTTTTCTCTCTTAGAAGGTGACCTAACAACC  536

seq1  TGTATGAACCAGGCTTCAGCCTTTTCTTTCTCCCAGATTGGGAGTTCTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGAACCAGGCTTCAGCCTTTTCTTTCTCCCAGATTGGGAGTTCTCA  586

seq1  AAAAGTTCTAATTTCTTGGAGCCTATTGTCTCAGTCAGAGAGCCAAAGGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCTAATTTCTTGGAGCCTATTGTCTCAGTCAGAGAGCCAAAGGT  636

seq1  AGCCACCAGAATCTCTTTAGAATATCTTCATACCTACAGGGTAGCTAGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCAGAATCTCTTTAGAATATCTTCATACCTACAGGGTAGCTAGCT  686

seq1  ACACAAGGGACACTTAGAAGGTCTAATTCTACTAGGCTGTATTTTATACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGGGACACTTAGAAGGTCTAATTCTACTAGGCTGTATTTTATACA  736

seq1  CAGTGGATTTTCCTTGTCAGTAATTGTTTCCTTTAGATTTTTCTCACCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGATTTTCCTTGTCAGTAATTGTTTCCTTTAGATTTTTCTCACCTG  786

seq1  GACTATTGCTTGAAATTGCCATATAGAACCTCTGGCTGGTAAACAGAGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTGCTTGAAATTGCCATATAGAACCTCTGGCTGGTAAACAGAGTT  836

seq1  CCCATAACCTGAGTACAGCCCTTAGACAGGTGTACCACCTTTTAAGAGTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAACCTGAGTACAGCCCTTAGACAGGTGTACCACCTTTTAAGAGTG  886

seq1  AAACCTACTTACTAGTAGGCTGGCATTCTTAGGAATAGTGAAGGGATCCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTACTTACTAGTAGGCTGGCATTCTTAGGAATAGTGAAGGGATCCA  936

seq1  GGTGTGTGTGTGTGGCTAGGGCACTGATAGTATCTGCTGCAGCATCAAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTGTGTGTGGCTAGGGCACTGATAGTATCTGCTGCAGCATCAAAT  986

seq1  CTGATCTATAAGATGCAGCAGGGGAGCTGGGCGGTGGTGGTGCATGCCTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTATAAGATGCAGCAGGGGAGCTGGGCGGTGGTGGTGCATGCCTT  1036

seq1  TAATCCCAGCACTTGGGAGGCAGATGCAGGCGGATTTCTGAGTTAGAGGC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAGCACTTGGGAGGCAGATGCAGGCGGATTTCTGAGTTAGAGGC  1086

seq1  CAGCCTGGTCTACAGTGTGAATTC  1122
      ||||||||||||||||||||||||
seq2  CAGCCTGGTCTACAGTGTGAATTC  1110

seq1: chr2_120358089_120359174
seq2: B6Ng01-151P02.g_66_1139

seq1  GAATTCCAGAGCGAGGTAGAGAGTACTGCAGCAGCAGCACAGGCACTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGCGAGGTAGAGAGTACTGCAGCAGCAGCACAGGCACTCAA  50

seq1  TCCAAACTGTGCAGCTACAAGGATGCAAGTAGATTAGTGACAACTGCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACTGTGCAGCTACAAGGATGCAAGTAGATTAGTGACAACTGCTCC  100

seq1  CCTCCCAAATAGAGATCTTTGTCTTCAATAAACATTTTAAAAGCAAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAAATAGAGATCTTTGTCTTCAATAAACATTTTAAAAGCAAAGAA  150

seq1  ACCAGCTTACCAAGTACTCACAACCATTAAGCAGGTCTCTAAGCTTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTTACCAAGTACTCACAACCATTAAGCAGGTCTCTAAGCTTTCTG  200

seq1  CTTTACCAGACCATGAACTTTGCAAAAGGACTAAGAAAGGAAAACAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCAGACCATGAACTTTGCAAAAGGACTAAGAAAGGAAAACAAGGC  250

seq1  AAATGAACCAACAACAGTAAAGTCCCTGAGCCTGGAGGGCTACACTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAACCAACAACAGTAAAGTCCCTGAGCCTGGAGGGCTACACTTACA  300

seq1  TCGTTGCAAAACTATGATTTTCCGCCGCCGGGCGTGGTGGCGCACGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTGCAAAACTATGATTTTCCGCCGCCGGGCGTGGTGGCGCACGCCTT  350

seq1  TAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGC  400

seq1  CAACCTGGTCTACAAAGTGAGCTCCAGGACAGCCAGGGCTATACAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGGTCTACAAAGTGAGCTCCAGGACAGCCAGGGCTATACAGAGAA  450

seq1  ACCCTGTCTCGAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAACTATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCTCGAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAACTATGA  500

seq1  TTTTCCAAGTTGAACCTATGCTGAGCACTTCTTGACCACTTAGAACAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAAGTTGAACCTATGCTGAGCACTTCTTGACCACTTAGAACAGCA  550

seq1  TCTCAAGATGCTCTGAGTGAGCTTAAGAGAAAGCATTCTGCAGTCCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGATGCTCTGAGTGAGCTTAAGAGAAAGCATTCTGCAGTCCTCTC  600

seq1  TGTAGTACCCAGAATGCCTATGGGGGATTCCACAAGCTCAGTGAAAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTACCCAGAATGCCTATGGGGGATTCCACAAGCTCAGTGAAAGGTA  650

seq1  GTAACAACAGGTAGTTGAAAAAATTGACCACTAGCAGGGCGGTGGTGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAACAGGTAGTTGAAAAAATTGACCACTAGCAGGGCGGTGGTGGCA  700

seq1  CATGCCTTTAATCTCAGGCAAAAGCAGGCCTTCTCTGAGTTCGAGGCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTTTAATCTCAGGCAAAAGCAGGCCTTCTCTGAGTTCGAGGCCAG  750

seq1  TCTGTTCTATAGACCAGACAGGGCTATATAGAGAAACCCCATCTTGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTATAGACCAGACAGGGCTATATAGAGAAACCCCATCTTGAAAA  800

seq1  CCAAAAAGCAAGCAAGCAAACAAATCAAAAATTTTTACCATTGGTTCCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAGCAAGCAAGCAAACAAATCAAAAATTTTTACCATTGGTTCCAA  850

seq1  ACATTAAGATTCAGAGACAGCACATTCTAGTCCATCTGAACTAAAGTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAGATTCAGAGACAGCACATTCTAGTCCATCTGAACTAAAGTGAC  900

seq1  AGATTTCTGATGACGTATGTAATCCTAGGTCCAATTAGTGTTTCAGGTGC  950
      |||||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  AGATTTCTGATGACGTATGTAATCCTAGGTCCAATTAGTG-TTCA-GTGC  948

seq1  CTCCATTTTAATGGCATCCTCTGTCAAGACAGACTATCACACGTGTCATA  1000
      ||| ||||||||||||| ||||||| ||||||||||||||||||||||||
seq2  CTCAATTTTAATGGCAT-CTCTGTC-AGACAGACTATCACACGTGTCATA  996

seq1  TAGGAACAGCCAGTGCTTAATACTGAATTAAAGCAGACATCTACAATGGG  1050
      ||||||||| |||||| |||||||| |||||||| |||||||||||||||
seq2  TAGGAACAG-CAGTGCCTAATACTG-ATTAAAGC-GACATCTACAATGGG  1043

seq1  TATTTTTGGCACAAGTTTAATTTAAGTTGAACAAGA  1086
      ||||||||   ||||||  | |||||||||||||||
seq2  TATTTTTG---CAAGTT--AATTAAGTTGAACAAGA  1074