BAC Information

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BAC

Clone NameB6Ng01-152C03
Chromosome2 (Build37)
Map Location 94,702,793 - 94,805,379
singlet/doubletdoublet
Overlap genenone
Upstream geneGm1967, Gm1335, LOC620695, Alkbh3, Hsd17b12, E530001K10Rik, Ttc17, Itpa-ps1, Api5, LOC100043259
Downstream geneLOC100042843
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152C03.bB6Ng01-152C03.g
ACCDH947783DH947784
length9161,038
definitionDH947783|Mus musculus domesticus DNA, BAC clone: B6Ng01-152C03, 5' end.DH947784|Mus musculus domesticus DNA, BAC clone: B6Ng01-152C03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,702,793 - 94,703,703)(94,804,339 - 94,805,379)
sequence
gaattcaagaacaaatgaatttgattttgctgaatatgaatgtcatttac
ttcccggagtccatgttccttaacataaaacacatacaattccaaatata
atttgtttttaaaaatattttaatttgccaatttcaatttgcatgagatc
agttcactagaaaattaaacacatttttcttgaatgtaataatgaacacc
attgtctgtaccactcaagcagaactacaatttaattgtatttaatacag
ttaaatgtattctttttttttttttcttcctgaaggttgacagtagaacc
cattgttagatctcttgagcaggagtgctaggagattatggcttgaacta
agtgagttgtagaaggaaccaacgctgttatttctctgaatcatttacat
tcagttgtggagtcaggtttttctttcccctttcattctttcattttgtt
taatttctatcagaagggctgtcttttttatttttatttttatttttatt
ttttttaaacacaggtcataataaacacttgcttcttccttagatggttc
ttagtacccatttttcagattcagttttagatttaagaaccttagtactt
ctatggattgaacaccaaagaaaggcaatataaaatttccccagggaaac
atgagcttttgttatcaggctgttctcaccatatcttacatttctttcct
gatttgcagcttttctcctctgtaactacttcctatctgcctggatgctc
tataagttttttaaacttatagagcatccaggtcctatgtctgtaaagat
agccttgtgtaaccctcaaccttctcaaacctatagtaataaagatattg
gatatgatatgaaagagatagtaaataaactactgagataactttgtgtg
tggggggttgtgtgtg
gaattcaaggaaaccttcccaggaggattcctagacttatcaatgttgga
aagtgaaagaattgcccgggggttgggggacgactgtggaagaaaaatat
atttcttacttagaagtttatttaccaacctcagaacggagtgtgcttac
tgtagagacatgtctagaaaaatctaccaatgagtgaatgagtgggagtt
ttatggagacacttctagatacatctatcaaccttaggactaagtagaga
tactatggagatatttctagacatgtaagttccttgagttttgtttatat
ttctttcctcaggaatgtgctggagatcacgtgtcaccaaaatgaggggg
aaaagcaagccaaggaatcagatttagtatcaatagtatctcagagtgac
aactgggagtggattggtagatcactcaaaaagtctttgaggacagaaga
tgaaactgcttaatataaacatctatccttgaaggaatgagaaaactaaa
gcaaattctctatgtgcttgggctcattcaaaggaaatggacacaaagtg
gacaagaaacatgaaagtgactaagtgcagtgtgacaaaaagacaaatac
aatatctagagtagctgggtaagcaaatgaattatgtgtcacatgactcg
ggtgtgcatgtgcttatgtcaccataacagtactatactaaattaccaca
atgtaaacattgcacttcttattagcattatggggagatcctagataaaa
agtgtgcagatacacggggatggagattttaatcttctttgtctattgta
gaaagccattatgatatgctgaaaagtggtataaaacgtcattttgtctg
ctgttgtggcttatacctataatcccagcacttagaagctcagactaaag
gttatttgtgagtttaaagccatacacatacacatagacatacacataaa
tataaacacacatagaaactacacacatatatatacacaatacccacata
ctacacagacattatccaatacacatggatacatacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_94702793_94703703
seq2: B6Ng01-152C03.b_42_957

seq1  GAATTCAAGAACAAATGAATTTGATTTTGCTGAATATGAATGTCATTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAACAAATGAATTTGATTTTGCTGAATATGAATGTCATTTAC  50

seq1  TTCCCGGAGTCCATGTTCCTTAACATAAAACACATACAATTCCAAATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCGGAGTCCATGTTCCTTAACATAAAACACATACAATTCCAAATATA  100

seq1  ATTTGTTTTTAAAAATATTTTAATTTGCCAATTTCAATTTGCATGAGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTTTAAAAATATTTTAATTTGCCAATTTCAATTTGCATGAGATC  150

seq1  AGTTCACTAGAAAATTAAACACATTTTTCTTGAATGTAATAATGAACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACTAGAAAATTAAACACATTTTTCTTGAATGTAATAATGAACACC  200

seq1  ATTGTCTGTACCACTCAAGCAGAACTACAATTTAATTGTATTTAATACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTGTACCACTCAAGCAGAACTACAATTTAATTGTATTTAATACAG  250

seq1  TTAAATGTATTCTTTTTTTTTTTTTCTTCCTGAAGGTTGACAGTAGAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTATTCTTTTTTTTTTTTTCTTCCTGAAGGTTGACAGTAGAACC  300

seq1  CATTGTTAGATCTCTTGAGCAGGAGTGCTAGGAGATTATGGCTTGAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTAGATCTCTTGAGCAGGAGTGCTAGGAGATTATGGCTTGAACTA  350

seq1  AGTGAGTTGTAGAAGGAACCAACGCTGTTATTTCTCTGAATCATTTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTGTAGAAGGAACCAACGCTGTTATTTCTCTGAATCATTTACAT  400

seq1  TCAGTTGTGGAGTCAGGTTTTTCTTTCCCCTTTCATTCTTTCATTTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGTGGAGTCAGGTTTTTCTTTCCCCTTTCATTCTTTCATTTTGTT  450

seq1  TAATTTCTATCAGAAGGGCTGTCTTTTTTATTTTTATTTTTATTTTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTATCAGAAGGGCTGTCTTTTTTATTTTTATTTTTATTTTTATT  500

seq1  TTTTTTAAACACAGGTCATAATAAACACTTGCTTCTTCCTTAGATGGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAACACAGGTCATAATAAACACTTGCTTCTTCCTTAGATGGTTC  550

seq1  TTAGTACCCATTTTTCAGATTCAGTTTTAGATTTAAGAACCTTAGTACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACCCATTTTTCAGATTCAGTTTTAGATTTAAGAACCTTAGTACTT  600

seq1  CTATGGATTGAACACCAAAGAAAGGCAATATAAAATTTCCCCAGGGAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGATTGAACACCAAAGAAAGGCAATATAAAATTTCCCCAGGGAAAC  650

seq1  ATGAGCTTTTGTTATCAGGCTGTTCTCACCATATCTTACATTTCTTTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTTTTGTTATCAGGCTGTTCTCACCATATCTTACATTTCTTTCCT  700

seq1  GATTTGCAGCTTTTCTCCTCTGTAACTACTTCCTATCTGCCTGGATGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGCAGCTTTTCTCCTCTGTAACTACTTCCTATCTGCCTGGATGCTC  750

seq1  TATAAGTTTTTTAAACTTATAGAGCATCCAGGTCCTATGTCTGTAAAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTTTTTTAAACTTATAGAGCATCCAGGTCCTATGTCTGTAAAGAT  800

seq1  AGCCTTGTGTAACCCTCAACCTTCTCAAACCTATAGTAATAAAGATATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGTGTAACCCTCAACCTTCTCAAACCTATAGTAATAAAGATATTG  850

seq1  GATATGATATGAAAGAGATAAGTAAATAAACTACTGAGATAACTTTGTGT  900
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GATATGATATGAAAGAGAT-AGTAAATAAACTACTGAGATAACTTTGTGT  899

seq1  GTG------TGTGTGTG  911
      |||      ||||||||
seq2  GTGGGGGGTTGTGTGTG  916

seq1: chr2_94804339_94805379
seq2: B6Ng01-152C03.g_66_1103 (reverse)

seq1  ATGTATGTATCCATGTGTATGTGTAT-ATGTCTGTGTATGTATGTGTGTA  49
      |||||||||||||||||||| || || ||||||||||| ||||||| |||
seq2  ATGTATGTATCCATGTGTAT-TGGATAATGTCTGTGTA-GTATGTGGGTA  48

seq1  TGTGTGTATATATATGTGTGTAAGTTTCTATGTGTGTTTATATTTATGTG  99
      | ||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  T-TGTGTATATATATGTGTGT-AGTTTCTATGTGTGTTTATATTTATGTG  96

seq1  TATGTCTATGTGTATGTGTATGGCTTTAAACTCACAAATAACCTTTAGTC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTATGTGTATGTGTATGGCTTTAAACTCACAAATAACCTTTAGTC  146

seq1  TGAGCTTCTAAGTGCTGGGATTATAGGTATAAGCCACAACAGCAGACAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTCTAAGTGCTGGGATTATAGGTATAAGCCACAACAGCAGACAAA  196

seq1  ATGACCTTTTATACCACTTTTCAGCATATCATAATGGCTTTCTACAATAG  249
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACGTTTTATACCACTTTTCAGCATATCATAATGGCTTTCTACAATAG  246

seq1  ACAAAGAAGATTAAAATCTCCATCCCCGTGTATCTGCACACTTTTTATCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAAGATTAAAATCTCCATCCCCGTGTATCTGCACACTTTTTATCT  296

seq1  AGGATCTCCCCATAATGCTAATAAGAAGTGCAATGTTTACATTGTGGTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTCCCCATAATGCTAATAAGAAGTGCAATGTTTACATTGTGGTAA  346

seq1  TTTAGTATAGTACTGTTATGGTGACATAAGCACATGCACACCCGAGTCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTATAGTACTGTTATGGTGACATAAGCACATGCACACCCGAGTCAT  396

seq1  GTGACACATAATTCATTTGCTTACCCAGCTACTCTAGATATTGTATTTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACATAATTCATTTGCTTACCCAGCTACTCTAGATATTGTATTTGT  446

seq1  CTTTTTGTCACACTGCACTTAGTCACTTTCATGTTTCTTGTCCACTTTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTCACACTGCACTTAGTCACTTTCATGTTTCTTGTCCACTTTGT  496

seq1  GTCCATTTCCTTTGAATGAGCCCAAGCACATAGAGAATTTGCTTTAGTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTTCCTTTGAATGAGCCCAAGCACATAGAGAATTTGCTTTAGTTT  546

seq1  TCTCATTCCTTCAAGGATAGATGTTTATATTAAGCAGTTTCATCTTCTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCCTTCAAGGATAGATGTTTATATTAAGCAGTTTCATCTTCTGT  596

seq1  CCTCAAAGACTTTTTGAGTGATCTACCAATCCACTCCCAGTTGTCACTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAGACTTTTTGAGTGATCTACCAATCCACTCCCAGTTGTCACTCT  646

seq1  GAGATACTATTGATACTAAATCTGATTCCTTGGCTTGCTTTTCCCCCTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACTATTGATACTAAATCTGATTCCTTGGCTTGCTTTTCCCCCTCA  696

seq1  TTTTGGTGACACGTGATCTCCAGCACATTCCTGAGGAAAGAAATATAAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTGACACGTGATCTCCAGCACATTCCTGAGGAAAGAAATATAAAC  746

seq1  AAAACTCAAGGAACTTACATGTCTAGAAATATCTCCATAGTATCTCTACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCAAGGAACTTACATGTCTAGAAATATCTCCATAGTATCTCTACT  796

seq1  TAGTCCTAAGGTTGATAGATGTATCTAGAAGTGTCTCCATAAAACTCCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTAAGGTTGATAGATGTATCTAGAAGTGTCTCCATAAAACTCCCA  846

seq1  CTCATTCACTCATTGGTAGATTTTTCTAGACATGTCTCTACAGTAAGCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCACTCATTGGTAGATTTTTCTAGACATGTCTCTACAGTAAGCAC  896

seq1  ACTCCGTTCTGAGGTTGGTAAATAAACTTCTAAGTAAGAAATATATTTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCGTTCTGAGGTTGGTAAATAAACTTCTAAGTAAGAAATATATTTTT  946

seq1  CTTCCACAGTCGTCCCCCAACCCCCGGGCAATTCTTTCACTTTCCAACAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACAGTCGTCCCCCAACCCCCGGGCAATTCTTTCACTTTCCAACAT  996

seq1  TGATAAGTCTAGGAATCCTCCTGGGAAGGTTTCCTTGAATTC  1041
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGTCTAGGAATCCTCCTGGGAAGGTTTCCTTGAATTC  1038