BAC Information

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BAC

Clone NameB6Ng01-152H19
Chromosome2 (Build37)
Map Location 117,360,969 - 117,498,559
singlet/doubletdoublet
Overlap genenone
Upstream geneTmco5, LOC100043557, LOC241621, Spred1, LOC624574, 2610510H03Rik, Rasgrp1
Downstream geneThbs1, Fsip1, Gpr176, 1700054M17Rik, Eif2ak4, Srp14, LOC668859, Bmf, LOC640461, Bub1b, Pak6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152H19.bB6Ng01-152H19.g
ACCDH948049DH948050
length487776
definitionDH948049|Mus musculus domesticus DNA, BAC clone: B6Ng01-152H19, 5' end.DH948050|Mus musculus domesticus DNA, BAC clone: B6Ng01-152H19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,498,067 - 117,498,559)(117,360,969 - 117,361,744)
sequence
tctactgtatgtgtgttggggacctcatgtcagctggtgtatgctgtctc
tttggtggttcagtgtttgagagatctcaggagtccggattagttgagag
tgctggtcctcttagagggtggcccttctcctcatcttctttcagccttc
cctaattcaacaacagggctaagttgcttctgtctattggttgggggcaa
acatctgcatctgactctttcggctgcttattgggtcttttggagggcgg
tcatgatagatcccttttagtgagcattccatagcctcagtaatagtgtc
aggccttgtggcctcccttctctcttttctattttcatctttctggtttg
cacagattcttgcacgtgtcagtgaggcacactgtgaggtttttcacttg
ggtgtttactgagttgtgatcaaattagggtaattagcatatggatcacc
taacatttgtatatgtgtgtgtgtgtgtgggggggtg
gaattcccttcccccaaaatggactttctactgaaaatcaaacaattcaa
gactgaaactatatgatacttagggattttgaagttgcctattttaaaag
tggacatgaaatacacattacatttctgcgatgtcccagaagactgagaa
atgttgtttatgtggaaaattgcttattacagaaaagactttatagctat
attataattagtggcattcaaagctctctcctcctggcattccaaattaa
ggctgaaataatggatggctccgatatcatggctgccctgaagtttgggc
ttgatttctgaggctcacaagattcttactttgcatctaaaatgacttgg
gtagatactgtagaattataatatgagaggtggaatggagggagagacaa
agagatggatagatgcagggaaggagttgtagatttaaagccattactat
ctctgcttcatctgattgctctttttctcttcaagtaatttcagcaggct
ccaggcaacatgaaccaaacgtggagcctaaacaaaacattttctttgtg
tatgtggctaccaaaataacctgcacatgtcctgcacagggcacttagca
aagttctaagtaaacagagagataatgagaggtgcatggtggctggggat
gatgagaagcacagagagaaaggagaaagttcaccctagtcaaattcttc
ttcaaagactggtgtcataaatagcagccagtgctgctggggtgacctct
cctttactttcagcatcttgatggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_117498067_117498559
seq2: B6Ng01-152H19.b_46_538 (reverse)

seq1  CACCCCCCCACACACACACACACATATACAAATGTTAGGTGATCCATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCCCACACACACACACACATATACAAATGTTAGGTGATCCATATG  50

seq1  CTAATTACCCTAATTTGATCACAACTCAGTAAACACCCAAGTGAAAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTACCCTAATTTGATCACAACTCAGTAAACACCCAAGTGAAAAACC  100

seq1  TCACAGTGTGCCTCACTGACACGTGCAAGAATCTGTGCAAACCAGAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTGTGCCTCACTGACACGTGCAAGAATCTGTGCAAACCAGAAAGA  150

seq1  TGAAAATAGAAAAGAGAGAAGGGAGGCCACAAGGCCTGACACTATTACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATAGAAAAGAGAGAAGGGAGGCCACAAGGCCTGACACTATTACTG  200

seq1  AGGCTATGGAATGCTCACTAAAAGGGATCTATCATGACCGCCCTCCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATGGAATGCTCACTAAAAGGGATCTATCATGACCGCCCTCCAAAA  250

seq1  GACCCAATAAGCAGCCGAAAGAGTCAGATGCAGATGTTTGCCCCCAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAATAAGCAGCCGAAAGAGTCAGATGCAGATGTTTGCCCCCAACCA  300

seq1  ATAGACAGAAGCAACTTAGCCCTGTTGTTGAATTAGGGAAGGCTGAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACAGAAGCAACTTAGCCCTGTTGTTGAATTAGGGAAGGCTGAAAGA  350

seq1  AGATGAGGAGAAGGGCCACCCTCTAAGAGGACCAGCACTCTCAACTAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGGAGAAGGGCCACCCTCTAAGAGGACCAGCACTCTCAACTAATC  400

seq1  CGGACTCCTGAGATCTCTCAAACACTGAACCACCAAAGAGACAGCATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTCCTGAGATCTCTCAAACACTGAACCACCAAAGAGACAGCATACA  450

seq1  CCAGCTGACATGAGGTCCCCAACACACATACAGTAGAGAATTC  493
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGACATGAGGTCCCCAACACACATACAGTAGAGAATTC  493

seq1: chr2_117360969_117361744
seq2: B6Ng01-152H19.g_71_846

seq1  GAATTCCCTTCCCCCAAAATGGACTTTCTACTGAAAATCAAACAATTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTCCCCCAAAATGGACTTTCTACTGAAAATCAAACAATTCAA  50

seq1  GACTGAAACTATATGATACTTAGGGATTTTGAAGTTGCCTATTTTAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAAACTATATGATACTTAGGGATTTTGAAGTTGCCTATTTTAAAAG  100

seq1  TGGACATGAAATACACATTACATTTCTGCGATGTCCCAGAAGACTGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATGAAATACACATTACATTTCTGCGATGTCCCAGAAGACTGAGAA  150

seq1  ATGTTGTTTATGTGGAAAATTGCTTATTACAGAAAAGACTTTATAGCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTTTATGTGGAAAATTGCTTATTACAGAAAAGACTTTATAGCTAT  200

seq1  ATTATAATTAGTGGCATTCAAAGCTCTCTCCTCCTGGCATTCCAAATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATTAGTGGCATTCAAAGCTCTCTCCTCCTGGCATTCCAAATTAA  250

seq1  GGCTGAAATAATGGATGGCTCCGATATCATGGCTGCCCTGAAGTTTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAATAATGGATGGCTCCGATATCATGGCTGCCCTGAAGTTTGGGC  300

seq1  TTGATTTCTGAGGCTCACAAGATTCTTACTTTGCATCTAAAATGACTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCTGAGGCTCACAAGATTCTTACTTTGCATCTAAAATGACTTGG  350

seq1  GTAGATACTGTAGAATTATAATATGAGAGGTGGAATGGAGGGAGAGACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATACTGTAGAATTATAATATGAGAGGTGGAATGGAGGGAGAGACAA  400

seq1  AGAGATGGATAGATGCAGGGAAGGAGTTGTAGATTTAAAGCCATTACTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGGATAGATGCAGGGAAGGAGTTGTAGATTTAAAGCCATTACTAT  450

seq1  CTCTGCTTCATCTGATTGCTCTTTTTCTCTTCAAGTAATTTCAGCAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTTCATCTGATTGCTCTTTTTCTCTTCAAGTAATTTCAGCAGGCT  500

seq1  CCAGGCAACATGAACCAAACGTGGAGCCTAAACAAAACATTTTCTTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAACATGAACCAAACGTGGAGCCTAAACAAAACATTTTCTTTGTG  550

seq1  TATGTGGCTACCAAAATAACCTGCACATGTCCTGCACAGGGCACTTAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGCTACCAAAATAACCTGCACATGTCCTGCACAGGGCACTTAGCA  600

seq1  AAGTTCTAAGTAAACAGAGAGATAATGAGAGGTGCATGGTGGCT-GGGAT  649
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAGTTCTAAGTAAACAGAGAGATAATGAGAGGTGCATGGTGGCTGGGGAT  650

seq1  GATGAGAAGCACAGAGAGAAAGGAGAAAGTTCACCCTAGTCAAATTCTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAAGCACAGAGAGAAAGGAGAAAGTTCACCCTAGTCAAATTCTTC  700

seq1  TTCAAAGACTGGTGTCATAAATAGCAGCCAGTGCTGCTGGGGTGACCTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGACTGGTGTCATAAATAGCAGCCAGTGCTGCTGGGGTGACCTCT  750

seq1  CCCTTTAGCTTCAGCATCTTGATGGAG  776
       ||||||  ||||||||||||||||||
seq2  -CCTTTACTTTCAGCATCTTGATGGAG  776