BAC Information

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BAC

Clone NameB6Ng01-152M09
Chromosome2 (Build37)
Map Location 157,680,892 - 157,836,326
singlet/doubletdoublet
Overlap geneCtnnbl1, LOC100043681, Gm691, 2610036D13Rik
Upstream geneTgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal, Src, Blcap, Nnat
Downstream gene2610304G08Rik, Tgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1, Actr5, Ppp1r16b, 2310007D09Rik, Dhx35, LOC100043891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152M09.bB6Ng01-152M09.g
ACCDH948265DH948266
length7771,073
definitionDH948265|Mus musculus domesticus DNA, BAC clone: B6Ng01-152M09, 5' end.DH948266|Mus musculus domesticus DNA, BAC clone: B6Ng01-152M09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(157,835,550 - 157,836,326)(157,680,892 - 157,681,976)
sequence
gaattcctgatggcacattctaggtatctgacaatgtgtgggagtcctct
cctggttctcacgtaccatccagcacagctctgaaatgaccaagtcatgg
cccatacacacaccatgctcctctggcctgcaagccctgtggctactgga
tttaggagtactcactcctgcagatagagatggacaccaaggagaaaatt
gcaagcctacccactagactggatagtcctaatgcagtgaggggtgatga
cttcatccagtgacagcattttacagtgttacacatttatagtccggctt
cggctcagtccttagtacccttgggccgcaggttcgtgtcctcccagcat
gctgctctgtttccccaaagggtatgtttgagacctttatttctctcttc
atgctctgtgtttattttcttttttgttcaacatctgtctctgaatttga
ctctctccttacagaaaagaaaagctttcaggcatcaagccactcagcct
cttcattacctctaagcctgcctcctttgctttcctgccttctgtgctgc
tgaaatctcttccgccatgatgtccgaggcagtatgagctcctgattcct
tctctttggcacgctcttcttccctttgtattgctgtcagcctcacccag
ctctgaatcttcctccgtattactatccacataaaaatgctcatagcctc
ccatcctcacttaaattctctcagtgacaagatcaagcaaaagaaatctc
cagggggcggggggggggagaagagag
gaattcacttcccaaactctgaaagagcttgtaggccacagtgagctttc
atttagatgaaatactctgaaagcaaaaggcagggaactgagctgagctg
tggctgctgcagggctttctccatcagaggcctcacccaagcctccatgt
ggccagagaagctggtctttgtcagcactcagctccatggggacaacaca
tatgggcatcccttgtaaaatgaaggtgttgaactccaggcagaagcttc
ctggttcttcctaccagtgtctggtctgtgtataatcatgggagtgccct
gaggagaagcgtgcctttccatcggcagttgatgtgcttctgaggcttct
cctgttgccatgcgggcctgcttctgagaatagggctgcctgtgtgcacg
tccctttgcttaggagcaacctcaggacactcaggacagttaggctctct
ttttgctttggggagtcctaagaaagaactaagaaagaacttaaggataa
ggggtcagtcagaagacgcaggattactgctgagagcaagaggtgtgtat
tgtctctcctgggtaagacaatctggaggccagcagggccattctgacgc
ttctgggtgtcctgccattctttttttttttttttttttaaagatttatt
tatttatttattatatgtaagtacactgtagctgtcctcagacactccag
aagagggagtcagatcttgttacggatggttgtaagccaccatgtggttg
ctgggatttgaacaccttgaccttcagaagagcagtcggggtgctcttac
ccttctcaccagcccgtcctgccattcttatctcaaggccagaagcattt
gtggccctcagtgggcccccagcgctatgaaagacctggctgtgcttttc
aagattgtttatggtcccagatggctgctagtgccctggttaaactccta
tatttcaaagagcaggaagagacggaaggacagccggaatattctcttcc
tagggctcacaatgccagccagccaaattatggatgtaagtagccatgta
gtcttgccagattttgttggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_157835550_157836326
seq2: B6Ng01-152M09.b_49_825 (reverse)

seq1  CTCTCTTCTCCCCCCCCCCGCCCCCTGGAGATTTCTTTTGCTTGATCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTCTCCCCCCCCCCGCCCCCTGGAGATTTCTTTTGCTTGATCTTG  50

seq1  TCACTGAGAGAATTTAAGTGAGGATGGGAGGCTATGAGCATTTTTATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGAGAGAATTTAAGTGAGGATGGGAGGCTATGAGCATTTTTATGTG  100

seq1  GATAGTAATACGGAGGAAGATTCAGAGCTGGGTGAGGCTGACAGCAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTAATACGGAGGAAGATTCAGAGCTGGGTGAGGCTGACAGCAATAC  150

seq1  AAAGGGAAGAAGAGCGTGCCAAAGAGAAGGAATCAGGAGCTCATACTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAAGAAGAGCGTGCCAAAGAGAAGGAATCAGGAGCTCATACTGCC  200

seq1  TCGGACATCATGGCGGAAGAGATTTCAGCAGCACAGAAGGCAGGAAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGACATCATGGCGGAAGAGATTTCAGCAGCACAGAAGGCAGGAAAGCA  250

seq1  AAGGAGGCAGGCTTAGAGGTAATGAAGAGGCTGAGTGGCTTGATGCCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGCAGGCTTAGAGGTAATGAAGAGGCTGAGTGGCTTGATGCCTGA  300

seq1  AAGCTTTTCTTTTCTGTAAGGAGAGAGTCAAATTCAGAGACAGATGTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTTCTTTTCTGTAAGGAGAGAGTCAAATTCAGAGACAGATGTTGA  350

seq1  ACAAAAAAGAAAATAAACACAGAGCATGAAGAGAGAAATAAAGGTCTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAGAAAATAAACACAGAGCATGAAGAGAGAAATAAAGGTCTCAA  400

seq1  ACATACCCTTTGGGGAAACAGAGCAGCATGCTGGGAGGACACGAACCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCCTTTGGGGAAACAGAGCAGCATGCTGGGAGGACACGAACCTGC  450

seq1  GGCCCAAGGGTACTAAGGACTGAGCCGAAGCCGGACTATAAATGTGTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAAGGGTACTAAGGACTGAGCCGAAGCCGGACTATAAATGTGTAAC  500

seq1  ACTGTAAAATGCTGTCACTGGATGAAGTCATCACCCCTCACTGCATTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAAATGCTGTCACTGGATGAAGTCATCACCCCTCACTGCATTAGG  550

seq1  ACTATCCAGTCTAGTGGGTAGGCTTGCAATTTTCTCCTTGGTGTCCATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCCAGTCTAGTGGGTAGGCTTGCAATTTTCTCCTTGGTGTCCATCT  600

seq1  CTATCTGCAGGAGTGAGTACTCCTAAATCCAGTAGCCACAGGGCTTGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGCAGGAGTGAGTACTCCTAAATCCAGTAGCCACAGGGCTTGCAG  650

seq1  GCCAGAGGAGCATGGTGTGTGTATGGGCCATGACTTGGTCATTTCAGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGGAGCATGGTGTGTGTATGGGCCATGACTTGGTCATTTCAGAGC  700

seq1  TGTGCTGGATGGTACGTGAGAACCAGGAGAGGACTCCCACACATAGTCAG  750
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTGCTGGATGGTACGTGAGAACCAGGAGAGGACTCCCACACATTGTCAG  750

seq1  ATACCTAGAATGTGCCATCAGGAATTC  777
      |||||||||||||||||||||||||||
seq2  ATACCTAGAATGTGCCATCAGGAATTC  777

seq1: chr2_157680892_157681976
seq2: B6Ng01-152M09.g_71_1143

seq1  GAATTCACTTCCCAAACTCTGAAAGAGCTTGTAGGCCACAGTGAGCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCCCAAACTCTGAAAGAGCTTGTAGGCCACAGTGAGCTTTC  50

seq1  ATTTAGATGAAATACTCTGAAAGCAAAAGGCAGGGAACTGAGCTGAGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGATGAAATACTCTGAAAGCAAAAGGCAGGGAACTGAGCTGAGCTG  100

seq1  TGGCTGCTGCAGGGCTTTCTCCATCAGAGGCCTCACCCAAGCCTCCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCTGCAGGGCTTTCTCCATCAGAGGCCTCACCCAAGCCTCCATGT  150

seq1  GGCCAGAGAAGCTGGTCTTTGTCAGCACTCAGCTCCATGGGGACAACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGAGAAGCTGGTCTTTGTCAGCACTCAGCTCCATGGGGACAACACA  200

seq1  TATGGGCATCCCTTGTAAAATGAAGGTGTTGAACTCCAGGCAGAAGCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGCATCCCTTGTAAAATGAAGGTGTTGAACTCCAGGCAGAAGCTTC  250

seq1  CTGGTTCTTCCTACCAGTGTCTGGTCTGTGTATAATCATGGGAGTGCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTCTTCCTACCAGTGTCTGGTCTGTGTATAATCATGGGAGTGCCCT  300

seq1  GAGGAGAAGCGTGCCTTTCCATCGGCAGTTGATGTGCTTCTGAGGCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAAGCGTGCCTTTCCATCGGCAGTTGATGTGCTTCTGAGGCTTCT  350

seq1  CCTGTTGCCATGCGGGCCTGCTTCTGAGAATAGGGCTGCCTGTGTGCACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGCCATGCGGGCCTGCTTCTGAGAATAGGGCTGCCTGTGTGCACG  400

seq1  TCCCTTTGCTTAGGAGCAACCTCAGGACACTCAGGACAGTTAGGCTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTGCTTAGGAGCAACCTCAGGACACTCAGGACAGTTAGGCTCTCT  450

seq1  TTTTGCTTTGGGGAGTCCTAAGAAAGAACTAAGAAAGAACTTAAGGATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTTGGGGAGTCCTAAGAAAGAACTAAGAAAGAACTTAAGGATAA  500

seq1  GGGGTCAGTCAGAAGACGCAGGATTACTGCTGAGAGCAAGAGGTGTGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCAGTCAGAAGACGCAGGATTACTGCTGAGAGCAAGAGGTGTGTAT  550

seq1  TGTCTCTCCTGGGTAAGACAATCTGGAGGCCAGCAGGGCCATTCTGACGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCCTGGGTAAGACAATCTGGAGGCCAGCAGGGCCATTCTGACGC  600

seq1  TTCTGGGTGTCCTGCCATTCTTTTTTTTTTTTTTTTTTTAAAGATTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGTGTCCTGCCATTCTTTTTTTTTTTTTTTTTTTAAAGATTTATT  650

seq1  TATTTATTTATTATATGTAAGTACACTGTAGCTGTCCTCAGACACTCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTATATGTAAGTACACTGTAGCTGTCCTCAGACACTCCAG  700

seq1  AAGAGGGAGTCAGATCTTGTTACGGATGGTTGTAAGCCACCATGTGGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGAGTCAGATCTTGTTACGGATGGTTGTAAGCCACCATGTGGTTG  750

seq1  CTGGGATTTGAACACC-TGACCTTCAGAAGAGCAGTC-GGGTGCTCTTAC  798
      |||||||||||||||| |||||||||||||||||||| ||||||||||||
seq2  CTGGGATTTGAACACCTTGACCTTCAGAAGAGCAGTCGGGGTGCTCTTAC  800

seq1  CCATCTCACCAGCCCGTCCTGCCATTCTTATCTCAAGGCCAGAAGCATTT  848
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCACCAGCCCGTCCTGCCATTCTTATCTCAAGGCCAGAAGCATTT  850

seq1  GTTGGCCCTCAGTGGGCCCCCAAGCGCCTATGAAAGACCTGGCTGTGCTT  898
      | ||||||||||||||||||| |||| |||||||||||||||||||||||
seq2  G-TGGCCCTCAGTGGGCCCCC-AGCG-CTATGAAAGACCTGGCTGTGCTT  897

seq1  TTCAAGATTGTTTTATGGTCCCAGATGGCTGCTAGTGCCCTGGTTATAAC  948
      |||||||||| ||||||||||||||||||||||||||||||||||| |||
seq2  TTCAAGATTG-TTTATGGTCCCAGATGGCTGCTAGTGCCCTGGTTA-AAC  945

seq1  TCCTATATTCCAAAGAGCAGGAAAGAGACGGGGAAGGACAGCCGGGATAT  998
      ||||||||| ||||||||||| |||||||  |||||||||||||| ||||
seq2  TCCTATATTTCAAAGAGCAGG-AAGAGAC--GGAAGGACAGCCGGAATAT  992

seq1  GTCCCTTCCTAAAGGTCTCA-AATGCCAGCCCAGCCTAAATTATTGATGT  1047
       || ||||||  ||| |||| |||||||| |||||| ||||||| |||||
seq2  -TCTCTTCCT--AGGGCTCACAATGCCAG-CCAGCC-AAATTATGGATGT  1037

seq1  AAAGTTAGCCATGTAGTCCTGCAAGATTTTGTTTGTTT  1085
      ||   ||||||||||||| ||| |||||||||| ||||
seq2  AA--GTAGCCATGTAGTCTTGCCAGATTTTGTTGGTTT  1073