BAC Information

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BAC

Clone NameB6Ng01-153D10
Chromosome2 (Build37)
Map Location 83,329,420 - 83,507,454
singlet/doubletdoublet
Overlap geneZc3h15
Upstream geneLOC433550, LOC269292, LOC433440, Fsip2, LOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077
Downstream geneItgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl, Tfpi, LOC672763, Ctnnd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153D10.bB6Ng01-153D10.g
ACCDH948590DH948591
length1,165357
definitionDH948590|Mus musculus domesticus DNA, BAC clone: B6Ng01-153D10, 5' end.DH948591|Mus musculus domesticus DNA, BAC clone: B6Ng01-153D10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,506,284 - 83,507,454)(83,329,420 - 83,329,776)
sequence
gaattcaagatcagccttggccacactgcaaaatcaaggcctgaactaca
ttaacatcctgctcccccctaaaacaaaacatcattccaaagtttggtca
tagactcatttgaaaagtacccatattagtggctaggccactggatatac
caaataatagtatactattattatgtctgatattccccttctaagataca
cattcaaaataccgagatgacaccttaaaataggttagacacttcagaat
acatatgtatgttttttctcttgtctatgtgaaaactacaaattaaatgg
atgaacaaaatgtcactttctacattaacaaaaagcaatacaagggcaaa
catacaacacgaggaaaggaatattaaaagcactctctactactgtttta
tgcaggtttgtttttgaaaatacggtatatcaccaaattctactttaatt
aaaattaagcttctattaatctctactaattgagaactattatctttatt
caaatagttatcatcaggaatatgcgctttaacattgaagaatccgaaag
agaagattttggcaatccattttaaattctgacgtatttttgaaagtcac
tcatatacgtatttgaattgatagtctatcaacagtgagcttagtacatg
gaaacatttacctaactagttctatcagaacagtcctacactgaacaaat
ggaagatctatagcctatgatgttgaacactctttgtacaaagctttcat
cctggatacaagacaatcacaacaatctcctcatttctgccccaagtgcc
ctctgtccacttgtgtttaacagtggctgtaagactttcttaatgaccta
tatctaaactctgatcctgcagtttaattactatcatactgtaaagtcat
ccaatggtcaaaaattaaagagatattatacaattttgattagttcatgt
ggtggagcttagattatgtcaagtcattatgcaaagataaggttaaatcc
agtctactatctgcattagaccctgttgtgtacattagggatatagtgtg
gtctcatgaaacacatctaggtgaacaattaaccaagcatatgggaggaa
gtgaagtacatttcttcttcttgtgaaagctttaattttatgttctccgt
ctctgactcttagaa
aaaacagcaaggatgtgactttaggagccataaatcatctccccgccccc
aaaaaaaaattccaggattttctggtccaaaaatctcatggaagaacatt
taagactatctgtatggtcgcctaacaaaacaggagaggtttccagttac
tggcttcctgaccgttaaattatgaagaaccataaaaggattcaactgtt
ttgtgaaatggattttgaaaagacaaatattagatctagacaaagtctga
aacaaatttagatcaaaagactttaaatagattcatctataatctctttc
aatgtttcctggagcagcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_83506284_83507454
seq2: B6Ng01-153D10.b_47_1211 (reverse)

seq1  TTCTAAGAGTTTAGAAAACGAGAGACAT-AAATATAAGCTTTCTACAAG-  48
      ||||||||| | ||| |  |||| |||| ||||  |||||||| ||||| 
seq2  TTCTAAGAG-TCAGAGACGGAGA-ACATAAAATTAAAGCTTTC-ACAAGA  47

seq1  AGAAGAAATGTAACTTTCACTTCCTTCCATATGCTTGGTTAATTGTTCAC  98
      ||||||||||||   |||||||||| ||||||||||||||||||||||||
seq2  AGAAGAAATGTA--CTTCACTTCCTCCCATATGCTTGGTTAATTGTTCAC  95

seq1  CTTAGATTGTGTTTCATGAGACCACACTATTATCCT-ATGTACACAACAG  147
      | |||| |||||||||||||||||||||||   ||| |||||||||||||
seq2  C-TAGA-TGTGTTTCATGAGACCACACTATATCCCTAATGTACACAACAG  143

seq1  AGTCTAATGCAGAATAGTTAGACTGGATTTAACCTTATCTTTGCATAATG  197
       ||||||||||| |||| ||||||||||||||||||||||||||||||||
seq2  GGTCTAATGCAG-ATAG-TAGACTGGATTTAACCTTATCTTTGCATAATG  191

seq1  ACTTGACATAATCTAAGCTCCACCACATGAACTAATCAAAATTGTATAAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACATAATCTAAGCTCCACCACATGAACTAATCAAAATTGTATAAT  241

seq1  ATCTCTTTAATTTTTGACCATTGGATGACTTTACAGTATGATAGTAATTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTTAATTTTTGACCATTGGATGACTTTACAGTATGATAGTAATTA  291

seq1  AACTGCAGGATCAGAGTTTAGATATAGGTCATTAAGAAAGTCTTACAGCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCAGGATCAGAGTTTAGATATAGGTCATTAAGAAAGTCTTACAGCC  341

seq1  ACTGTTAAACACAAGTGGACAGAGGGCACTTGGGGCAGAAATGAGGAGAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAAACACAAGTGGACAGAGGGCACTTGGGGCAGAAATGAGGAGAT  391

seq1  TGTTGTGATTGTCTTGTATCCAGGATGAAAGCTTTGTACAAAGAGTGTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGATTGTCTTGTATCCAGGATGAAAGCTTTGTACAAAGAGTGTTC  441

seq1  AACATCATAGGCTATAGATCTTCCATTTGTTCAGTGTAGGACTGTTCTGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCATAGGCTATAGATCTTCCATTTGTTCAGTGTAGGACTGTTCTGA  491

seq1  TAGAACTAGTTAGGTAAATGTTTCCATGTACTAAGCTCACTGTTGATAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTAGTTAGGTAAATGTTTCCATGTACTAAGCTCACTGTTGATAGA  541

seq1  CTATCAATTCAAATACGTATATGAGTGACTTTCAAAAATACGTCAGAATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAATTCAAATACGTATATGAGTGACTTTCAAAAATACGTCAGAATT  591

seq1  TAAAATGGATTGCCAAAATCTTCTCTTTCGGATTCTTCAATGTTAAAGCG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGGATTGCCAAAATCTTCTCTTTCGGATTCTTCAATGTTAAAGCG  641

seq1  CATATTCCTGATGATAACTATTTGAATAAAGATAATAGTTCTCAATTAGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCCTGATGATAACTATTTGAATAAAGATAATAGTTCTCAATTAGT  691

seq1  AGAGATTAATAGAAGCTTAATTTTAATTAAAGTAGAATTTGGTGATATAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTAATAGAAGCTTAATTTTAATTAAAGTAGAATTTGGTGATATAC  741

seq1  CGTATTTTCAAAAACAAACCTGCATAAAACAGTAGTAGAGAGTGCTTTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATTTTCAAAAACAAACCTGCATAAAACAGTAGTAGAGAGTGCTTTTA  791

seq1  ATATTCCTTTCCTCGTGTTGTATGTTTGCCCTTGTATTGCTTTTTGTTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCTTTCCTCGTGTTGTATGTTTGCCCTTGTATTGCTTTTTGTTAA  841

seq1  TGTAGAAAGTGACATTTTGTTCATCCATTTAATTTGTAGTTTTCACATAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAAGTGACATTTTGTTCATCCATTTAATTTGTAGTTTTCACATAG  891

seq1  ACAAGAGAAAAAACATACATATGTATTCTGAAGTGTCTAACCTATTTTAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGAAAAAACATACATATGTATTCTGAAGTGTCTAACCTATTTTAA  941

seq1  GGTGTCATCTCGGTATTTTGAATGTGTATCTTAGAAGGGGAATATCAGAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCATCTCGGTATTTTGAATGTGTATCTTAGAAGGGGAATATCAGAC  991

seq1  ATAATAATAGTATACTATTATTTGGTATATCCAGTGGCCTAGCCACTAAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATAGTATACTATTATTTGGTATATCCAGTGGCCTAGCCACTAAT  1041

seq1  ATGGGTACTTTTCAAATGAGTCTATGACCAAACTTTGGAATGATGTTTTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTACTTTTCAAATGAGTCTATGACCAAACTTTGGAATGATGTTTTG  1091

seq1  TTTTAGGGGGGAGCAGGATGTTAATGTAGTTCAGGCCTTGATTTTGCAGT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGGGGGAGCAGGATGTTAATGTAGTTCAGGCCTTGATTTTGCAGT  1141

seq1  GTGGCCAAGGCTGATCTTGAATTC  1171
      ||||||||||||||||||||||||
seq2  GTGGCCAAGGCTGATCTTGAATTC  1165

seq1: chr2_83329420_83329776
seq2: B6Ng01-153D10.g_76_432

seq1  AAAACAGCAAGGATGTGACTTTAGGAGCCATAAATCATCTCCCCGCCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCAAGGATGTGACTTTAGGAGCCATAAATCATCTCCCCGCCCCC  50

seq1  AAAAAAAAATTCCAGGATTTTCTGGTCCAAAAATCTCATGGAAGAACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATTCCAGGATTTTCTGGTCCAAAAATCTCATGGAAGAACATT  100

seq1  TAAGACTATCTGTATGGTCGCCTAACAAAACAGGAGAGGTTTCCAGTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTATCTGTATGGTCGCCTAACAAAACAGGAGAGGTTTCCAGTTAC  150

seq1  TGGCTTCCTGACCGTTAAATTATGAAGAACCATAAAAGGATTCAACTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCCTGACCGTTAAATTATGAAGAACCATAAAAGGATTCAACTGTT  200

seq1  TTGTGAAATGGATTTTGAAAAGACAAATATTAGATCTAGACAAAGTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAATGGATTTTGAAAAGACAAATATTAGATCTAGACAAAGTCTGA  250

seq1  AACAAATTTAGATCAAAAGACTTTAAATAGATTCATCTATAATCTCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATTTAGATCAAAAGACTTTAAATAGATTCATCTATAATCTCTTTC  300

seq1  AATGTTTCCTGGAGCAGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTCCTGGAGCAGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  350

seq1  TGTGTGT  357
      |||||||
seq2  TGTGTGT  357