BAC Information

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BAC

Clone NameB6Ng01-153D16
Chromosome2 (Build37)
Map Location 61,890,118 - 62,005,633
singlet/doubletdoublet
Overlap geneSlc4a10
Upstream geneTank, Psmd14, Tbr1, LOC100039274
Downstream geneDpp4, Gcg, Fap, Ifih1, Gca, Kcnh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153D16.bB6Ng01-153D16.g
ACCDH948602DH948603
length1,034396
definitionDH948602|Mus musculus domesticus DNA, BAC clone: B6Ng01-153D16, 5' end.DH948603|Mus musculus domesticus DNA, BAC clone: B6Ng01-153D16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,890,118 - 61,890,945)(62,005,232 - 62,005,633)
sequence
gaattccattagagttttgatggaaattgcattgattctgtaggtaagtt
ttgataatagggcagttcccccaatattacctctggataggtcttattgc
tttagagcagtttgtgttcccagcaatattgtatagaagatgcagacatt
tcccatatattcctttcctgtccgcatgtttagacacctttactaacagt
attactcaccagaatgtgatattttgttacagtttatgaatgtttactga
cactcctcagcttgtagtgagaatcttgctcctgcctttccacctctatg
ctgggaattttgctagtttgcttgctcgggttttgtacttttactgttat
tatctaaacagccactgtcaaactcagggtcatccagagtttttcctatg
ttatgtcttctaatagtttttatagttttgtgttttttaaatttccagtt
aatcttgagttattttcctgagcaatgaaaatatatgttgaaatttattt
tttttgtattgatatatagatattccagagtttcattgaaagatactatt
attcatctacttatagtgccttactcttttgtcagaattgaggcataaca
ggccctctgtgtctgtgggtctattctggtctcctctctgctctctcaac
cttcttcatatattgctggagctttatagtaagtcttggtgttgagcact
gacagtcctctagatttgttcctctttgtcaaaaatatgttatttttttg
tggattttccctctctacagaaacagagaaccagtttgttagaaaagaaa
atctacagaaaggattcgctccttttctttcacttgtgattgtattgaat
ctaaagataagatttagaagaactgatgtttctccattgtctatttactt
agttattcggtttattttatagagtttctttttttctttacatggacctt
gtatatatgtgttaaatttatatttacgtacttttggtgtcagtattatt
gtaatttgtttgcactgttagtgctgggaaatat
aaggttatttcttattctttcttctatcagataaagtatttctggtttta
tgctggcccacttaaagttgagtttgggttctggggataagagggagtat
tacctcccccccccccagagggaaaggagagggggaatgggtggaaggaa
ctgggaggagggagacgactgggaggagcaagggctcatgctgggatgta
aactgaataaattaattaatgaaaaaaaaaaagtagttagccaacaaaaa
atagaatttgtttgtgtgcttgtattgttttgctaattttttgttttatt
ttgttgagttttgttttgtttagacctctgtttttggtgtaagagagaat
aaagttgagtgggaaggaggatttgggaggagtttgaggaggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_61890118_61890945
seq2: B6Ng01-153D16.b_47_875

seq1  GAATTCCATTAGAGTTTTGATGGAAATTGCATTGATTCTGTAGGTAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTAGAGTTTTGATGGAAATTGCATTGATTCTGTAGGTAAGTT  50

seq1  TTGATAATAGGGCAGTTCCCCCAATATTACCTCTGGATAGGTCTTATTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAATAGGGCAGTTCCCCCAATATTACCTCTGGATAGGTCTTATTGC  100

seq1  TTTAGAGCAGTTTGTGTTCCCAGCAATATTGTATAGAAGATGCAGACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGCAGTTTGTGTTCCCAGCAATATTGTATAGAAGATGCAGACATT  150

seq1  TCCCATATATTCCTTTCCTGTCCGCATGTTTAGACACCTTTACTAACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATATATTCCTTTCCTGTCCGCATGTTTAGACACCTTTACTAACAGT  200

seq1  ATTACTCACCAGAATGTGATATTTTGTTACAGTTTATGAATGTTTACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTCACCAGAATGTGATATTTTGTTACAGTTTATGAATGTTTACTGA  250

seq1  CACTCCTCAGCTTGTAGTGAGAATCTTGCTCCTGCCTTTCCACCTCTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTCAGCTTGTAGTGAGAATCTTGCTCCTGCCTTTCCACCTCTATG  300

seq1  CTGGGAATTTTGCTAGTTTGCTTGCTCGGGTTTTGTACTTTTACTGTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAATTTTGCTAGTTTGCTTGCTCGGGTTTTGTACTTTTACTGTTAT  350

seq1  TATCTAAACAGCCACTGTCAAACTCAGGGTCATCCAGAGTTTTTCCTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAACAGCCACTGTCAAACTCAGGGTCATCCAGAGTTTTTCCTATG  400

seq1  TTATGTCTTCTAATAGTTTTTATAGTTTTGTGTTTTTTAAATTTCCAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCTTCTAATAGTTTTTATAGTTTTGTGTTTTTTAAATTTCCAGTT  450

seq1  AATCTTGAGTTATTTTCCTGAGCAATGAAAATATATGTTGAAATTTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGAGTTATTTTCCTGAGCAATGAAAATATATGTTGAAATTTATTT  500

seq1  TTTTTGTATTGATATATAGATATTCCAGAGTTTCATTGAAAGATACTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTATTGATATATAGATATTCCAGAGTTTCATTGAAAGATACTATT  550

seq1  ATTCATCTACTTATAGTGCCTTACTCTTTTGTCAGAATTGAGGCATAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCTACTTATAGTGCCTTACTCTTTTGTCAGAATTGAGGCATAACA  600

seq1  GGCCCTCTGTGTCTGTGGGTCTATTCTGGTCTCCTCTCTGCTCTCTCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTCTGTGTCTGTGGGTCTATTCTGGTCTCCTCTCTGCTCTCTCAAC  650

seq1  CTTCTTCATATATTGCTGGAGCTTTATAGTAAGTCTTGGTGTTGAGCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCATATATTGCTGGAGCTTTATAGTAAGTCTTGGTGTTGAGCACT  700

seq1  GACAGTCCTCTAGATTTGTTCCTCTTTGTCAAAAATATGTTATTTTTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCCTCTAGATTTGTTCCTCTTTGTCAAAAATATGTTATTTTTTTG  750

seq1  TGGATTTTCCCTCTCTACAGAAACAGAGAACCAGTTTGTTAGAAAAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTTCCCTCTCTACAGAAACAGAGAACCAGTTTGTTAGAAAAGAAA  800

seq1  ATCTACAG-AAGGATTCGCTCCTTTTCTT  828
      |||||||| ||||||||||||||||||||
seq2  ATCTACAGAAAGGATTCGCTCCTTTTCTT  829

seq1: chr2_62005232_62005633
seq2: B6Ng01-153D16.g_68_469 (reverse)

seq1  TTCCCCTCCTCCAGCTCCTCCCAAATCCTCCTTCCCACTCAACTTTATTC  50
      ||||||||||| | ||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCCTCAAACTCCTCCCAAATCCTCCTTCCCACTCAACTTTATTC  50

seq1  TCTCTTACACCAAAAACAGAGGTCTAAACAAAACAAAACTCAACAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTACACCAAAAACAGAGGTCTAAACAAAACAAAACTCAACAAAATA  100

seq1  AAACAAAAAATTAGCAAAACAATACAAGCACACAAACAAATTCTATTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAATTAGCAAAACAATACAAGCACACAAACAAATTCTATTTTT  150

seq1  TGTTGGCTAACTACTTTTTTTTTTTCATTAATTAATTTATTCAGTTTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCTAACTACTTTTTTTTTTTCATTAATTAATTTATTCAGTTTACA  200

seq1  TCCCAGCATGAGCCCTTGCTCCTCCCAGTCGTCTCCCTCCTCCCAGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCATGAGCCCTTGCTCCTCCCAGTCGTCTCCCTCCTCCCAGTTCC  250

seq1  TTCCACCCATTCCCCCTCTCCTTTCCCTCTGGGGGGGGGGGAGGTAATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCCATTCCCCCTCTCCTTTCCCTCTGGGGGGGGGGGAGGTAATAC  300

seq1  TCCCTCTTATCCCCAGAACCCAAACTCAACTTTAAGTGGGCCAGCATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTTATCCCCAGAACCCAAACTCAACTTTAAGTGGGCCAGCATAAA  350

seq1  ACCAGAAATACTTTATCTGATAGAAGAAAGAATAAGAAATAACCTTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAATACTTTATCTGATAGAAGAAAGAATAAGAAATAACCTTGAAT  400

seq1  TC  402
      ||
seq2  TC  402