BAC Information

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BAC

Clone NameB6Ng01-153G04
Chromosome2 (Build37)
Map Location 154,956,126 - 155,101,026
singlet/doubletdoublet
Overlap geneItch, LOC100043877, LOC668931, Dynlrb1
Upstream gene1700058C13Rik, Plunc, 2310021H06Rik, U46068, BC018465, 5430413K10Rik, OTTMUSG00000015915, Cdk5rap1, Snta1, Cbfa2t2, Apba2bp, 1700003F12Rik, E2f1, Pxmp4, Zfp341, Chmp4b, LOC668936, LOC435692, Raly, Eif2s2, a, Ahcy
Downstream geneMap1lc3a, Cdc91l1, Trp53inp2, Ncoa6, LOC668938, Ggtl3, Acss2, Gss, Myh7b, Trpc4ap, Edem2, Procr, Mmp24, Itgb4bp, 5530400B04Rik, 2410003P15Rik, Gdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153G04.bB6Ng01-153G04.g
ACCDH948714DH948715
length998406
definitionDH948714|Mus musculus domesticus DNA, BAC clone: B6Ng01-153G04, 5' end.DH948715|Mus musculus domesticus DNA, BAC clone: B6Ng01-153G04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,100,024 - 155,101,026)(154,956,126 - 154,956,538)
sequence
gaattcagctgagattgccttaaagaggctgggtggcggtgcctccttaa
ccccagctctgtgggcagagacgggatggtctcttgagttcaaggccagc
ctggtctagatagtgagaccttgtgttttgggttttgttttgctttttaa
atgtcttagggagctggatttgtttggaaagatattattgtctgcttggt
caggtagggtgcttgcccgcaagcatgaggatgtgggttcaattttcgga
atatgttagatcctagaggctccacctacaaagggattcaaccaggcctt
atatcccatctctaccttctccaggcagctcaatgcctggtatgtggcag
ccccaaattagggtggggcggtaggattacttccctaaattatgacctta
agtcctatttagtgccttcactaaccttagacaccttcccctacaagaaa
atctgttagtgcaaggattagcctttgttttgaggtttctgcaatgttct
ggcttccctttcagcaagtgacaggattactaaatctgtctcaggacatc
tctctactgaatccgagaagaattttttttaatattttaaatattaaaat
attttctgtctatggtggtagaagaacaacttccacacagcaaatagata
aatgtaaaaaaaaaaaaaaaaaagacacagcaggaaagatcattaagaga
atagaaatggggctggagagatggctcatgggttaagagcactgactcct
ctttctagaggtcctgagttcaaatcccagcaaccacatggtgactcgca
accatcaggaataagatcggatgccctcttatggtgtgtctgaagacagc
tacagggtactcacatatacgaaataaataaataagtaaatcctttaaaa
agagagagagaatagaaatgtaaatatggtttaaatactgaaaggtgggt
agtgaagggtcttgaaccatgggagccgaatccgatcatgtagaacgt
actttgaagaccaggctggccttgaactcagaaatctgcctgcctctgcc
tcctgagggctgggattaaaggcgtgcaccaccacgtccggcttcagtgt
tttcatttcttataaaagcccttcattgggctggagagatagcttattag
taggtagagtgcttactgcacaaatataaagttgtgattaccagtatcca
tgtcaaaagctgggcttggtgacacatacctgtgatcccagtactggaaa
gtgggaaagaggaggacccctgtagtgtgccggccagccagtctagctga
attggtgacctcctggcttagtaagccactcttctcataaaatattgatt
gaagaatacacttatattctacctctgccctctgaaatccctcaacccct
gagaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_155100024_155101026
seq2: B6Ng01-153G04.b_44_1041 (reverse)

seq1  ACGTTCCTACATGATCCGCTTCTGGCTCCCATGGTTCAGAGCCCTTCACT  50
      ||||| |||||||||| | ||| |||||||||||||||   |||||||||
seq2  ACGTT-CTACATGATCGGATTC-GGCTCCCATGGTTCAAGACCCTTCACT  48

seq1  ACCCACCCTTTCAGTATTTAAAACCATATTTTACATTTCTATTCTCTCTC  100
      ||||| ||||||||||||| |||||||| |||||||||||||||||||||
seq2  ACCCA-CCTTTCAGTATTT-AAACCATA-TTTACATTTCTATTCTCTCTC  95

seq1  TCTTTTTTAAAGGATTTACTTATTTATTTATTTTGTATATGTGAGTACCC  150
      || |||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TC-TTTTTAAAGGATTTACTTATTTATTTATTTCGTATATGTGAGTACCC  144

seq1  TGTAGCTGTCTTCAGACACACCATAAGAGGGCATCCGATCTTATTCCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTGTCTTCAGACACACCATAAGAGGGCATCCGATCTTATTCCTGA  194

seq1  TGGTTGCGAGTCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCGAGTCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTAG  244

seq1  -AAGAGGAGTCAGTGCTCTTAACCCCTGAGCCATCTCTCCAGCCCCATTT  299
       |||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAAGAGGAGTCAGTGCTCTTAACCCATGAGCCATCTCTCCAGCCCCATTT  294

seq1  CTATTCTCTTAATGATCTTTCCTGCTGTGTCTTTTTTTTTTTTTTTTTTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTCTTAATGATCTTTCCTGCTGTGTCTTTTTTTTTTTTTTTTTTA  344

seq1  CATTTATCTATTTGCTGTGTGGAAGTTGTTCTTCTACCACCATAGACAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATCTATTTGCTGTGTGGAAGTTGTTCTTCTACCACCATAGACAGA  394

seq1  AAATATTTTAATATTTAAAATATTAAAAAAAATTCTTCTCGGATTCAGTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTAATATTTAAAATATTAAAAAAAATTCTTCTCGGATTCAGTA  444

seq1  GAGAGATGTCCTGAGACAGATTTAGTAATCCTGTCACTTGCTGAAAGGGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGTCCTGAGACAGATTTAGTAATCCTGTCACTTGCTGAAAGGGA  494

seq1  AGCCAGAACATTGCAGAAACCTCAAAACAAAGGCTAATCCTTGCACTAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAACATTGCAGAAACCTCAAAACAAAGGCTAATCCTTGCACTAAC  544

seq1  AGATTTTCTTGTAGGGGAAGGTGTCTAAGGTTAGTGAAGGCACTAAATAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTCTTGTAGGGGAAGGTGTCTAAGGTTAGTGAAGGCACTAAATAG  594

seq1  GACTTAAGGTCATAATTTAGGGAAGTAATCCTACCGCCCCACCCTAATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAAGGTCATAATTTAGGGAAGTAATCCTACCGCCCCACCCTAATTT  644

seq1  GGGGCTGCCACATACCAGGCATTGAGCTGCCTGGAGAAGGTAGAGATGGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGCCACATACCAGGCATTGAGCTGCCTGGAGAAGGTAGAGATGGG  694

seq1  ATATAAGGCCTGGTTGAATCCCTTTGTAGGTGGAGCCTCTAGGATCTAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGGCCTGGTTGAATCCCTTTGTAGGTGGAGCCTCTAGGATCTAAC  744

seq1  ATATTCCGAAAATTGAACCCACATCCTCATGCTTGCGGGCAAGCACCCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCGAAAATTGAACCCACATCCTCATGCTTGCGGGCAAGCACCCTA  794

seq1  CCTGACCAAGCAGACAATAATATCTTTCCAAACAAATCCAGCTCCCTAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCAAGCAGACAATAATATCTTTCCAAACAAATCCAGCTCCCTAAG  844

seq1  ACATTTAAAAAGCAAAACAAAACCCAAAACACAAGGTCTCACTATCTAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAAAAAGCAAAACAAAACCCAAAACACAAGGTCTCACTATCTAGA  894

seq1  CCAGGCTGGCCTTGAACTCAAGAGACCATCCCGTCTCTGCCCACAGAGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGGCCTTGAACTCAAGAGACCATCCCGTCTCTGCCCACAGAGCT  944

seq1  GGGGTTAAGGAGGCACCGCCACCCAGCCTCTTTAAGGCAATCTCAGCTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTAAGGAGGCACCGCCACCCAGCCTCTTTAAGGCAATCTCAGCTGA  994

seq1  ATTC  1003
      ||||
seq2  ATTC  998

seq1: chr2_154956126_154956538
seq2: B6Ng01-153G04.g_71_482

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCC  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGAAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCC  50

seq1  TCTGCCTCCTGAGGGCTGGGATTAAAGGCGTGCACCACCACGTCCGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCTGAGGGCTGGGATTAAAGGCGTGCACCACCACGTCCGGCTT  100

seq1  CAGTGTTTTCATTTCTTATAAAAGCCCTTCATTGGGCTGGAGAGATAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTTTCATTTCTTATAAAAGCCCTTCATTGGGCTGGAGAGATAGCT  150

seq1  TATTAGTAGGTAGAGTGCTTACTGCACAAATATAAAGTTGTGATTACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTAGGTAGAGTGCTTACTGCACAAATATAAAGTTGTGATTACCAG  200

seq1  TATCCATGTCAAAAGCTGGGCTTGGTGACACATACCTGTGATCCCAGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATGTCAAAAGCTGGGCTTGGTGACACATACCTGTGATCCCAGTAC  250

seq1  TGGAAAGTGGGAAAGAGGAGGACCCCTGGAGTGTGCCGGCCAGCCAGTCT  300
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGGAAAGTGGGAAAGAGGAGGACCCCTGTAGTGTGCCGGCCAGCCAGTCT  300

seq1  AGCTGAATTGGTGACCTCCTGGCTTAGTAAGCCACTCTATCTCAGAAAAT  350
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  AGCTGAATTGGTGACCTCCTGGCTTAGTAAGCCACTCT-TCTCATAAAAT  349

seq1  AGTGATTGAAGAAGACACTTAGATTCTACCTCTGCCCTCTGAAATCCCTC  400
      | ||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  ATTGATTGAAGAATACACTTATATTCTACCTCTGCCCTCTGAAATCCCTC  399

seq1  AACCCCAGAGACA  413
      |||||| ||||||
seq2  AACCCCTGAGACA  412