BAC Information

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BAC

Clone NameB6Ng01-153I03
Chromosome2 (Build37)1 (Build37)
Map Location 142,776,440 - 142,776,97357,687,308 - 57,688,129
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153I03.bB6Ng01-153I03.g
ACCDH948802DH948803
length800822
definitionDH948802|Mus musculus domesticus DNA, BAC clone: B6Ng01-153I03, 5' end.DH948803|Mus musculus domesticus DNA, BAC clone: B6Ng01-153I03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,440 - 142,776,973)(57,687,308 - 57,688,129)
sequence
gaattctttgtttagctctgagccgaatagatggggttatttgattttct
ggagtccaccttcttgagaaacttaatatatattggatattagtccccta
tgtgatttaagataggtaaagatcctttcccaatctgttggtggcctttt
tgtcttattgacagtgtcttttgccctgcagaagctttgcagtttcatga
ggtcccatttgtcaatcctcaatcttacagcacaagccatttctgttcta
ttcaggaatttttcccctgtgcccatatcttcgaggcttttccccacttt
ctcctctataagtttcagtgtctctggttttatgtgaagttccttgatcc
acttagatttgaccttagtacaaggagataggaatggatcgatttgcatt
cttctacatgataacaaccagttgtgcaagcaccatttgttgaaaatgct
gtctttcttccactggatggttttagctcccttgtcgaagatcaagtgac
cataggtgtgtgggttcatttctgggtcttcaattctattctactggtct
acttgtctgtcactataccagtaccatgcagtttttatcacaattgctct
gtagtaaagctttaggtcaggcatggtgattccaccagaggtacttttat
ccttgagaagagtttttgctatcctcggttttttgttattcccagatgaa
cttgcagattgctctttctaattcgttgaaaaaattgagttggaaatttg
atggggattgcattgaatctgtagattgcttttttgtaagataagccatt

cggaattaagcacacgagcatatgcatcagggtctctctcacacacacat
ggcctcatatctggcttgattcagaatcaggaaatttatagttaaaatac
aaaccagttttatttgtgtagactgtcagagaagcagagccaggggatgt
tcagttaagagctaaatggtgacagtgcctgaacctcgagtgtgtataat
gaagatcccatatcttcccacttcatatgggacaagtgcttcaggaggag
agatgggctacatgcagagttgggctacatgcttgctctgataatggcaa
tgatatttttgaataatgcctaaaagaaagtgaaaaattattattttatc
atggttatgaggaaaacctttgatattctttggtgaaccatatacgtggc
ttgtgtgtgtgtgtgtgtgcacgtagaggggacaatacatatgcctgcat
atgcatatagagaccaagagtgtccagctctctaccttctctctttgata
cagatctcttgatggaacctcccatagcctggtgtagtggcttgaataag
aatggccctcatggatttgtatgttcgaatgtgtggttcccagttagtgg
aactgttttgggaaaggattaggaggtatatggccttgttagaggtgtgt
cactgtgggtgggttgtcagatttcaaaagctcatcccaggcccagtgta
acaaaattctctctctgcctgaaacttgaggattatatatgatctcttag
ctactgctctggtgccaaatctgggacctgtcaccatgcttcccaccatg
aatgtcacagattaacatttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776440_142776973
seq2: B6Ng01-153I03.b_306_843 (reverse)

seq1  AATGGC-TATCTTGC-CAAAAGCAATCTACAGATTCAATGCAATCCCCAT  48
      |||||| |||||| |  |||||||||||||||||||||||||||||||||
seq2  AATGGCTTATCTTACAAAAAAGCAATCTACAGATTCAATGCAATCCCCAT  50

seq1  CAAAATTCCAACTCAA-TTCTTCAACGAATTAGAAGGAGCAATTTGCAAA  97
      |||| ||||||||||| || ||||||||||||||| ||||||| ||||| 
seq2  CAAATTTCCAACTCAATTTTTTCAACGAATTAGAAAGAGCAATCTGCAAG  100

seq1  TTCATCT-GGAATAACAAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGG  146
      ||||||| |||||||||||||||| ||||||||||||| |||||||||||
seq2  TTCATCTGGGAATAACAAAAAACCGAGGATAGCAAAAACTCTTCTCAAGG  150

seq1  ATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTAC  196
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTAC  200

seq1  AGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGT  246
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGTGACAGACAAGT  250

seq1  AGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATG  296
      |||||| | |||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGTAGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATG  300

seq1  GTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGAC  346
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGAC  350

seq1  AGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAG  396
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  AGCATTTTCAACAAATGGTGCTTGCACAACTGGTTGTTATCATGTAGAAG  400

seq1  AATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGT  446
      ||||  ||||||||||| | ||||||||||||||||||||||||||||||
seq2  AATGCAAATCGATCCATTCCTATCTCCTTGTACTAAGGTCAAATCTAAGT  450

seq1  GGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAG  500

seq1  AAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGA  534
      ||||||||||||||||| ||||||||||||||||||||
seq2  AAAGTGGGGAAAAGCCTCGAAGATATGGGCACAGGGGA  538

seq1: chr1_57687308_57688129
seq2: B6Ng01-153I03.g_65_885 (reverse)

seq1  CCAAAGTGTTGATCTGTGACCATCATGGTGGGGAGCATGGTGGCAGGTCC  50
      ||||| |||| |||||||||  |||||||||| ||||||||| |||||||
seq2  CCAAA-TGTTAATCTGTGACATTCATGGTGGGAAGCATGGTGACAGGTCC  49

seq1  CAGATTTGGCACCAGAGCAGTAGCTAAGAGATCATATCTAATCCTCAAGT  100
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAGATTTGGCACCAGAGCAGTAGCTAAGAGATCATATATAATCCTCAAGT  99

seq1  TTCAGGCAGAGAGAGAA-TTTGTTACACTGGGCCTGGGATGAGCTTTTGA  149
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTCAGGCAGAGAGAGAATTTTGTTACACTGGGCCTGGGATGAGCTTTTGA  149

seq1  AATCTGACAACCCACCCACAGTGACACACCTCTAACAAGGCCATATACCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGACAACCCACCCACAGTGACACACCTCTAACAAGGCCATATACCT  199

seq1  CCTAATCCTT--CCCAAACAGTTCCACTAACTGGGAACCACACATTCGAA  247
      ||||||||||  || |||||||||||||||||||||||||||||||||||
seq2  CCTAATCCTTTCCCAAAACAGTTCCACTAACTGGGAACCACACATTCGAA  249

seq1  CATACAAATCCATGAGGGCCATTCTTATTCAAGCCACTACACCAGGCTAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAATCCATGAGGGCCATTCTTATTCAAGCCACTACACCAGGCTAT  299

seq1  GGGAGGTTCCATCAAGAGATCTGTATCAAAGAGAGAAGGTAGAGAGCTGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTTCCATCAAGAGATCTGTATCAAAGAGAGAAGGTAGAGAGCTGG  349

seq1  ACACTCTTGGTCTCTATATGCATATGCAGGCATATGTATTGTCCCCTCTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTTGGTCTCTATATGCATATGCAGGCATATGTATTGTCCCCTCTA  399

seq1  CGTGCACACACACACACACACAAGCCACGTATATGGTTCACCAAAGAATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCACACACACACACACACAAGCCACGTATATGGTTCACCAAAGAATA  449

seq1  TCAAAGGTTTTCCTCATAACCATGATAAAATAATAATTTTTCACTTTCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGTTTTCCTCATAACCATGATAAAATAATAATTTTTCACTTTCTT  499

seq1  TTAGGCATTATTCAAAAATATCATTGCCATTATCAGAGCAAGCATGTAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCATTATTCAAAAATATCATTGCCATTATCAGAGCAAGCATGTAGC  549

seq1  CCAACTCTGCATGTAGCCCATCTCTCCTCCTGAAGCACTTGTCCCATATG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCTGCATGTAGCCCATCTCTCCTCCTGAAGCACTTGTCCCATATG  599

seq1  AAGTGGGAAGATATGGGATCTTCATTATACACACTCGAGGTTCAGGCACT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGAAGATATGGGATCTTCATTATACACACTCGAGGTTCAGGCACT  649

seq1  GTCACCATTTAGCTCTTAACTGAACATCCCCTGGCTCTGCTTCTCTGACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCATTTAGCTCTTAACTGAACATCCCCTGGCTCTGCTTCTCTGACA  699

seq1  GTCTACACAAATAAAACTGGTTTGTATTTTAACTATAAATTTCCTGATTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACACAAATAAAACTGGTTTGTATTTTAACTATAAATTTCCTGATTC  749

seq1  TGAATCAAGCCAGATATGAGGCCATGTGTGTGTGAGAGAGACCCTGATGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCAAGCCAGATATGAGGCCATGTGTGTGTGAGAGAGACCCTGATGC  799

seq1  ATATGCTCGTGTGCGTGTGAATTCC  822
      ||||||||||||||   | ||||||
seq2  ATATGCTCGTGTGC---TTAATTCC  821