BAC Information

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BAC

Clone NameB6Ng01-153J18
Chromosome2 (Build37)
Map Location 156,419,455 - 156,600,122
singlet/doubletdoublet
Overlap geneDlgap4
Upstream geneMyh7b, Trpc4ap, Edem2, Procr, Mmp24, Itgb4bp, 5530400B04Rik, 2410003P15Rik, Gdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1, 0610011L14Rik
Downstream geneMyl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal, Src, Blcap, Nnat, Ctnnbl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153J18.bB6Ng01-153J18.g
ACCDH948875DH948876
length815422
definitionDH948875|Mus musculus domesticus DNA, BAC clone: B6Ng01-153J18, 5' end.DH948876|Mus musculus domesticus DNA, BAC clone: B6Ng01-153J18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(156,599,311 - 156,600,122)(156,419,455 - 156,419,882)
sequence
gaattcaattcttttaaaaattctatttattcgtgatgagagttggtgtg
gaagtcagtggactgttgcaggcctgcctggccacatacgaacagcaagt
gccattaccaaggagcctctctcacgccccagctcaggatttcagtgggg
cagctggagagagtgctgccattttcttagttgggcagcgtgggcgtagg
cggagcagatttgggagagatccattttgtcttggatttattcatttttg
gaaactttcttttgagataatttcaagcatactaaggttctaagactcgt
atagaaaactgacttccttgagagtctccagttgacctttggctcctcac
tcttccctgtgggaatatgcacattgcccaacacttgatagtgaataaga
ttttagtatatcctaaaaggaggactcttttacatattgatagtatatta
tcaaaatcataagatttaacattgatttaggcttttaatttatgacctat
attccaattgtgccagatgtctcagtaatatcctgtatggaaatttgttc
tggtccaggttgtgtgtgatgggtgaggtgcaggtgccatgggcatcatt
ctatggagcttgaagatgatgtcatgtagctggagggtgatgtcatggag
ctggagaatgttgccatggagctggaagatgtttgtcatggagctggttg
tggtggattgaatatgctttgctcagggagtagcactatttaggaggtgt
ggtcttgttggagtaggtgtggccttgttagaggaagtgtgtcactgtgg
gggtgggttttgaga
ttagcaggcaaaggaaatctttatccatagagaaaccactgttgtgatgc
ctaccacatcgctgctctgttatgaaatgttaatactacttgggctgtgg
agtagtgtgtgtctgtgtatttgtgtatgttatgtgtgtgtgtgtgtcct
agattggcaggttgttcttcagagccagattcctgagagagagcagatca
aaaggatgagaagataaagaaggtaggagcgatggagtcaggaggccgtg
cacacgctaagtcccgtgccaagagtgtttctggtttaagacaggggcca
atgtccttctcctcagggaaagcctcaggtcagcctagctcctgacatgt
ttgtgcgtgcacgtgcgcgtgcgtgcgtgcgtgcgtgcgtgcgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_156599311_156600122
seq2: B6Ng01-153J18.b_43_857 (reverse)

seq1  TCTCAAAACCCACCCCCACAGTGACACACTTCCTCTAACAAGGCCACACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAACCCACCCCCACAGTGACACACTTCCTCTAACAAGGCCACACC  50

seq1  TACTCCAACAAGACCACACCTCCT-AATAGTGCTACTCCCTGAGC-AAGC  98
      |||||||||||||||||||||||| |||||||||||||||||||| ||||
seq2  TACTCCAACAAGACCACACCTCCTAAATAGTGCTACTCCCTGAGCAAAGC  100

seq1  ATATTCAATCCACCACAACCAGCTCCATGAC-AACATCTTCCAGCTCCAT  147
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATATTCAATCCACCACAACCAGCTCCATGACAAACATCTTCCAGCTCCAT  150

seq1  GGCAACATTCTCCAGCTCCATGACATCACCCTCCAGCTACATGACATCAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACATTCTCCAGCTCCATGACATCACCCTCCAGCTACATGACATCAT  200

seq1  CTTCAAGCTCCATAGAATGATGCCCATGGCACCTGCACCTCACCCATCAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGCTCCATAGAATGATGCCCATGGCACCTGCACCTCACCCATCAC  250

seq1  ACACAACCTGGACCAGAACAAATTTCCATACAGGATATTACTGAGACATC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACCTGGACCAGAACAAATTTCCATACAGGATATTACTGAGACATC  300

seq1  TGGCACAATTGGAATATAGGTCATAAATTAAAAGCCTAAATCAATGTTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACAATTGGAATATAGGTCATAAATTAAAAGCCTAAATCAATGTTAA  350

seq1  ATCTTATGATTTTGATAATATACTATCAATATGTAAAAGAGTCCTCCTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATGATTTTGATAATATACTATCAATATGTAAAAGAGTCCTCCTTT  400

seq1  TAGGATATACTAAAATCTTATTCACTATCAAGTGTTGGGCAATGTGCATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATATACTAAAATCTTATTCACTATCAAGTGTTGGGCAATGTGCATA  450

seq1  TTCCCACAGGGAAGAGTGAGGAGCCAAAGGTCAACTGGAGACTCTCAAGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACAGGGAAGAGTGAGGAGCCAAAGGTCAACTGGAGACTCTCAAGG  500

seq1  AAGTCAGTTTTCTATACGAGTCTTAGAACCTTAGTATGCTTGAAATTATC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGTTTTCTATACGAGTCTTAGAACCTTAGTATGCTTGAAATTATC  550

seq1  TCAAAAGAAAGTTTCCAAAAATGAATAAATCCAAGACAAAATGGATCTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGAAAGTTTCCAAAAATGAATAAATCCAAGACAAAATGGATCTCT  600

seq1  CCCAAATCTGCTCCGCCTACGCCCACGCTGCCCAACTAAGAAAATGGCAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATCTGCTCCGCCTACGCCCACGCTGCCCAACTAAGAAAATGGCAG  650

seq1  CACTCTCTCCAGCTGCCCCACTGAAATCCTGAGCTGGGGCGTGAGAGAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCTCCAGCTGCCCCACTGAAATCCTGAGCTGGGGCGTGAGAGAGG  700

seq1  CTCCTTGGTAATGGCACTTGCTGTTCGTATGTGGCCAGGCAGGCCTGCAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGGTAATGGCACTTGCTGTTCGTATGTGGCCAGGCAGGCCTGCAA  750

seq1  CAGTCCACTGACTTCCACACCAACTCTCATCACGAATAAATAGAATTTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCACTGACTTCCACACCAACTCTCATCACGAATAAATAGAATTTTT  800

seq1  AAAAGAATTGAATTC  812
      |||||||||||||||
seq2  AAAAGAATTGAATTC  815

seq1: chr2_156419455_156419882
seq2: B6Ng01-153J18.g_70_497

seq1  GAATTCTTAGCAGGCAAAGGAAATCTTTATCCATAGAGAAACCACTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCAGGCAAAGGAAATCTTTATCCATAGAGAAACCACTGTTG  50

seq1  TGATGCCTACCACATCGCTGCTCTGTTATGAAATGTTAATACTACTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCTACCACATCGCTGCTCTGTTATGAAATGTTAATACTACTTGGG  100

seq1  CTGTGGAGTAGTGTGTGTCTGTGTATTTGTGTATGTTATGTGTGTGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGAGTAGTGTGTGTCTGTGTATTTGTGTATGTTATGTGTGTGTGTG  150

seq1  TGTCCTAGATTGGCAGGTTGTTCTTCAGAGCCAGATTCCTGAGAGAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAGATTGGCAGGTTGTTCTTCAGAGCCAGATTCCTGAGAGAGAGC  200

seq1  AGATCAAAAGGATGAGAAGATAAAGAAGGTAGGAGCGATGGAGTCAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAAAGGATGAGAAGATAAAGAAGGTAGGAGCGATGGAGTCAGGAG  250

seq1  GCCGTGCACACGCTAAGTCCCGTGCCAAGAGTGTTTCTGGTTTAAGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGCACACGCTAAGTCCCGTGCCAAGAGTGTTTCTGGTTTAAGACAG  300

seq1  GGGCCAATGTCCTTCTCCTCAGGGAAAGCCTCAGGTCAGCCTAGCTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAATGTCCTTCTCCTCAGGGAAAGCCTCAGGTCAGCCTAGCTCCTG  350

seq1  ACATGTTTGTGCGTGCACGTGCGCGTGCGTGCGTGCGTGCGTGCGTGCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTTGTGCGTGCACGTGCGCGTGCGTGCGTGCGTGCGTGCGTGCGT  400

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGT  428
      ||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGT  428