BAC Information

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BAC

Clone NameB6Ng01-154D16
Chromosome2 (Build37)
Map Location 170,119,073 - 170,229,760
singlet/doubletdoublet
Overlap geneLOC100043739, Bcas1
Upstream geneEG668954, Tshz2, LOC100043737, LOC100043910, Zfp217, Silg111
Downstream geneLOC228916, Cyp24a1, Pfdn4, 4930470P17Rik, Dok5, LOC668955, LOC100043743
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154D16.bB6Ng01-154D16.g
ACCDH949332DH949333
length1621,129
definitionDH949332|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D16, 5' end.DH949333|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(170,119,073 - 170,119,234)(170,228,624 - 170,229,760)
sequence
tgtttcctgtttatggatcaagttctgagctccaccatgcctttgtttgg
ccatcctcgtctctaaacccctggtactgtaagccggcaggtaagccttt
ccttctgtaagctgccttggtcatgtgtgggaacaggatcgagggtgggg
ttgggggggtgg
gaattcttccgggtaaatgaagccttgggttctgccgagtcagctgtccc
tccccctctcccatcccccacagttccctgcctccacccccactaccact
gagtcctcctagctgggtttggaattccagccacaatcccaccaagatgt
gaatcaggacagaggtaactccccactccccaccccccaaatctcctcct
gggggggaaaaacacacaaatctgtgttttcagaatgacaatcttatctg
tgtggcttataaaactacattcagaccatagcatcattaaaacaaggcga
ggattcatggacaagtggggcatttaccacataggccaaagaaaagataa
attataggcctgaaagctgactgagctgtgattcacacaaaccaactggc
tggcagggacggggcttttttttccccctctctctccccaagtgaaccag
ggttctaagataaacatttaatagatctcgcacgtgcgcaaaacgatcct
acaatggcaatctggttttactgctcataaaagaaaacactgggtgtctg
tttctctctcagtccttccaggggtatctttgtggtgggctcgaggagga
gcggtcgttgccaggaatggttcctcaggaactagaaatgcttctttttg
ctttatgaatttattcaagttctgcggcgcttatttaaacaggaaccctg
tacaagaagagaaagatggctggctttggtagttctagcgtgatctcatc
gtatccgtcttcacaaccctccccccccccaaacttttcgttacatttat
tatttattacatttacattattatttatttgtgggttgtttgtctgtctg
tcagcatgagtacacgcatgcgtgtaggtcagaggacaacctgtgggagc
cgattctctcttttccaccatgtcggtccctgaatccgatctctggtcat
caggcatggcagcagtgcacccggacttgctgagccctctcgaggcccag
cagactttcctagggatgccagctccgggtccccagttcactcagccaca
gaaccacagtctgagaggcagctgctgtttccgcctcctgatctgccttc
ttcagccctacgttcagaacgctgctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_170119073_170119234
seq2: B6Ng01-154D16.b_51_212

seq1  TGTTTCCTGTTTATGGATCAAGTTCTGAGCTCCACCATGCCTTTGTTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTGTTTATGGATCAAGTTCTGAGCTCCACCATGCCTTTGTTTGG  50

seq1  CCATCCTCGTCTCTAAACCCCTGGTACTGTAAGCCGGCAGGTAAGCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTCGTCTCTAAACCCCTGGTACTGTAAGCCGGCAGGTAAGCCTTT  100

seq1  CCTTCTGTAAGCTGCCTTGGTCATGTGTGGGAACAGGATCGAGGGTGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGTAAGCTGCCTTGGTCATGTGTGGGAACAGGATCGAGGGTGGGG  150

seq1  TTGGGGGGGTGG  162
      ||||||||||||
seq2  TTGGGGGGGTGG  162

seq1: chr2_170228624_170229760
seq2: B6Ng01-154D16.g_67_1195 (reverse)

seq1  GAGAGCAGCGTTTCTGAACGTAGTGCTGGAAAGAAGGC-GATCAGGGAGC  49
      |||||||||| |||||||||||| ||||  |||||||| |||||||  ||
seq2  GAGAGCAGCG-TTCTGAACGTAGGGCTG--AAGAAGGCAGATCAGGAGGC  47

seq1  GGAAACAGCAGGCTTGCTCTTCAGACTGTGGTTCCTGTGGCTGGAGTGAC  99
      |||||||||| |||  ||| ||||||||||||| |||||||| |||||| 
seq2  GGAAACAGCA-GCTGCCTC-TCAGACTGTGGTT-CTGTGGCT-GAGTGAA  93

seq1  CTGGGGGCCCGGAGCTGGCATCCCTTAGGAAAGTCTGCTGGGGCCTTCGA  149
      |||||| ||||||||||||||||| |||||||||||||||||  | ||||
seq2  CTGGGGACCCGGAGCTGGCATCCC-TAGGAAAGTCTGCTGGG--CCTCGA  140

seq1  GAGGGCTCAGCAAGTCCGGGTGCACTGCTGCCATGCCTGATGACCAGAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTCAGCAAGTCCGGGTGCACTGCTGCCATGCCTGATGACCAGAGA  190

seq1  TCGGATTCAGGGACCGACATGGTGG-AAAGAGAGAATCGGCTCCCACAGG  248
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCGGATTCAGGGACCGACATGGTGGAAAAGAGAGAATCGGCTCCCACAGG  240

seq1  TTGTCCTCTGACCTACACGCATGCGTGTACTCATGCTGACAGACAGACAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTCTGACCTACACGCATGCGTGTACTCATGCTGACAGACAGACAA  290

seq1  ACAACCCACAAATAAATAATAATGTAAATGTAATAAATAATAAATGTAAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCACAAATAAATAATAATGTAAATGTAATAAATAATAAATGTAAC  340

seq1  GAAAAGTTTGGGGGGGGGGAGGGTTGTGAAGACGGATACGATGAGATCAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTTTGGGGGGGGGGAGGGTTGTGAAGACGGATACGATGAGATCAC  390

seq1  GCTAGAACTACCAAAGCCAGCCATCTTTCTCTTCTTGTACAGGGTTCCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAACTACCAAAGCCAGCCATCTTTCTCTTCTTGTACAGGGTTCCTG  440

seq1  TTTAAATAAGCGCCGCAGAACTTGAATAAATTCATAAAGCAAAAAGAAGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAAGCGCCGCAGAACTTGAATAAATTCATAAAGCAAAAAGAAGC  490

seq1  ATTTCTAGTTCCTGAGGAACCATTCCTGGCAACGACCGCTCCTCCTCGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAGTTCCTGAGGAACCATTCCTGGCAACGACCGCTCCTCCTCGAG  540

seq1  CCCACCACAAAGATACCCCTGGAAGGACTGAGAGAGAAACAGACACCCAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCACAAAGATACCCCTGGAAGGACTGAGAGAGAAACAGACACCCAG  590

seq1  TGTTTTCTTTTATGAGCAGTAAAACCAGATTGCCATTGTAGGATCGTTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTTTTATGAGCAGTAAAACCAGATTGCCATTGTAGGATCGTTTT  640

seq1  GCGCACGTGCGAGATCTATTAAATGTTTATCTTAGAACCCTGGTTCACTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCACGTGCGAGATCTATTAAATGTTTATCTTAGAACCCTGGTTCACTT  690

seq1  GGGGAGAGAGAGGGGGAAAAAAAAGCCCCGTCCCTGCCAGCCAGTTGGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAGAGAGGGGGAAAAAAAAGCCCCGTCCCTGCCAGCCAGTTGGTT  740

seq1  TGTGTGAATCACAGCTCAGTCAGCTTTCAGGCCTATAATTTATCTTTTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAATCACAGCTCAGTCAGCTTTCAGGCCTATAATTTATCTTTTCT  790

seq1  TTGGCCTATGTGGTAAATGCCCCACTTGTCCATGAATCCTCGCCTTGTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTATGTGGTAAATGCCCCACTTGTCCATGAATCCTCGCCTTGTTT  840

seq1  TAATGATGCTATGGTCTGAATGTAGTTTTATAAGCCACACAGATAAGATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATGCTATGGTCTGAATGTAGTTTTATAAGCCACACAGATAAGATT  890

seq1  GTCATTCTGAAAACACAGATTTGTGTGTTTTTCCCCCCCAGGAGGAGATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCTGAAAACACAGATTTGTGTGTTTTTCCCCCCCAGGAGGAGATT  940

seq1  TGGGGGGTGGGGAGTGGGGAGTTACCTCTGTCCTGATTCACATCTTGGTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGTGGGGAGTGGGGAGTTACCTCTGTCCTGATTCACATCTTGGTG  990

seq1  GGATTGTGGCTGGAATTCCAAACCCAGCTAGGAGGACTCAGTGGTAGTGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGTGGCTGGAATTCCAAACCCAGCTAGGAGGACTCAGTGGTAGTGG  1040

seq1  GGGTGGAGGCAGGGAACTGTGGGGGATGGGAGAGGGGGAGGGACAGCTGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGAGGCAGGGAACTGTGGGGGATGGGAGAGGGGGAGGGACAGCTGA  1090

seq1  CTCGGCAGAACCCAAGGCTTCATTTACCCGGAAGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||
seq2  CTCGGCAGAACCCAAGGCTTCATTTACCCGGAAGAATTC  1129