BAC Information

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BAC

Clone NameB6Ng01-154E03
Chromosome2 (Build37)
Map Location 60,951,109 - 61,072,280
singlet/doubletdoublet
Overlap genenone
Upstream geneBaz2b, LOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861, Ly75, LOC100039176, Pla2r1, Itgb6, Rbms1, ENSMUSG00000075325
Downstream geneTank, Psmd14, Tbr1, LOC100039274, Slc4a10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154E03.bB6Ng01-154E03.g
ACCDH949350DH949351
length1,129387
definitionDH949350|Mus musculus domesticus DNA, BAC clone: B6Ng01-154E03, 5' end.DH949351|Mus musculus domesticus DNA, BAC clone: B6Ng01-154E03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,951,109 - 60,952,245)(61,071,888 - 61,072,280)
sequence
gaattcaggctctacaaaaatgctttaaatgacctctgtgggggactcaa
acccaacaatgcaaacacatgactttatccttatgccttttcctcaaaaa
agaatgagaaaggcaggggggaaagtttgtctatttttagccatgaaaca
aggtcactaaatatattatgtcagctaatccaagccccattaaaaatggt
tctatatagtacacaaagtcttctttttgctatagctcaagagtgatatg
ggctctgtaactattattttcttggttggttacaactgtatgaatttttg
gttgacatttctgaaataaatatagctacaggagcactggtattctgatt
tagaaatctgactacattagaagaaaattaaccttttcaaaaagccactg
ttctaaggaatgattttaatcaaatgagttctaaatgctgtacctgcata
tagaatttctgcagcgattgcagctccccagtgatctgttttccaaagga
ggaaaataacacccaataaaccatgtgcaaagtaagtctcaaagttgtaa
aaaggagggaaactgagctgtctcttcgcgtggcatccggttcagaaatc
aaatcaactatttttatcagtattttggaaacacacgaagaagaatattg
tgggcagagattaggggccttatgtgccttaggctgatgtcacacacaca
cacacacacatacacacacacacacacacacacacatacaccacttttta
aaataaatctcttgtgtgaattcaggctctattgaaaagctttccagtaa
attatatgtttgttgttggaatcctccatgatactcttattattcattta
ttttcaatttgacagctacttctactgtgctaacacaaacatcagaacga
ggctagggcgcgagttgcagaggagtgccagactatcatccatagcagac
ttcaaatgccgagcgccttgcatacatattaaacatatgaatgaaaatac
agtactcctgactttcagctgtgaactcaagtgtcctctttaccagtctc
ttagctaaggacattcagttccaacctgatcgggttgcaggaaattcatc
acagaaatctaggactctgtcactagaat
actttgtgctggccatctacgaatggaacttttacttcttaagacatttg
tagcctggcagtggtgacgcataactttaatcccagcacttgggaggcag
aggcaggcagatttctgagtttgaggccagccaagtctacagagtgagtt
ccagggccatactgagaaaccccatctcaaaaaaccaagacaaacaaaca
aacaaacaaaagacattcgttctagtgagtccttgacataggattacctg
ggagcagaatgagaagtactggatgggagtgaagaaagccccatggtttt
agctgcacctgtcccaagtaaggtttccatggtgctgggtcaagaagaag
aagaagaagaagaagaagaagaaggaggaggaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_60951109_60952245
seq2: B6Ng01-154E03.b_47_1175

seq1  GAATTCAGGCTCTACAAAAATGCTTTAAATGACCTCTGTGGGGGACTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCTCTACAAAAATGCTTTAAATGACCTCTGTGGGGGACTCAA  50

seq1  ACCCAACAATGCAAACACATGACTTTATCCTTATGCCTTTTCCTCAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACAATGCAAACACATGACTTTATCCTTATGCCTTTTCCTCAAAAA  100

seq1  AGAATGAGAAAGGCAGGGGGGAAAGTTTGTCTATTTTTAGCCATGAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAGAAAGGCAGGGGGGAAAGTTTGTCTATTTTTAGCCATGAAACA  150

seq1  AGGTCACTAAATATATTATGTCAGCTAATCCAAGCCCCATTAAAAATGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACTAAATATATTATGTCAGCTAATCCAAGCCCCATTAAAAATGGT  200

seq1  TCTATATAGTACACAAAGTCTTCTTTTTGCTATAGCTCAAGAGTGATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATAGTACACAAAGTCTTCTTTTTGCTATAGCTCAAGAGTGATATG  250

seq1  GGCTCTGTAACTATTATTTTCTTGGTTGGTTACAACTGTATGAATTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGTAACTATTATTTTCTTGGTTGGTTACAACTGTATGAATTTTTG  300

seq1  GTTGACATTTCTGAAATAAATATAGCTACAGGAGCACTGGTATTCTGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACATTTCTGAAATAAATATAGCTACAGGAGCACTGGTATTCTGATT  350

seq1  TAGAAATCTGACTACATTAGAAGAAAATTAACCTTTTCAAAAAGCCACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATCTGACTACATTAGAAGAAAATTAACCTTTTCAAAAAGCCACTG  400

seq1  TTCTAAGGAATGATTTTAATCAAATGAGTTCTAAATGCTGTACCTGCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGGAATGATTTTAATCAAATGAGTTCTAAATGCTGTACCTGCATA  450

seq1  TAGAATTTCTGCAGCGATTGCAGCTCCCCAGTGATCTGTTTTCCAAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTTCTGCAGCGATTGCAGCTCCCCAGTGATCTGTTTTCCAAAGGA  500

seq1  GGAAAATAACACCCAATAAACCATGTGCAAAGTAAGTCTCAAAGTTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAACACCCAATAAACCATGTGCAAAGTAAGTCTCAAAGTTGTAA  550

seq1  AAAGGAGGGAAACTGAGCTGTCTCTTCGCGTGGCATCCGGTTCAGAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGGGAAACTGAGCTGTCTCTTCGCGTGGCATCCGGTTCAGAAATC  600

seq1  AAATCAACTATTTTTATCAGTATTTTGGAAACACACGAAGAAGAATATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAACTATTTTTATCAGTATTTTGGAAACACACGAAGAAGAATATTG  650

seq1  TGGGCAGAGATTAGGGGCCTTATGTGCCTTAGGCTGATGTCACACACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGAGATTAGGGGCCTTATGTGCCTTAGGCTGATGTCACACACACA  700

seq1  CACACACACATACACACACACACACACACACACACATACACCACTTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACATACACACACACACACACACACACACATACACCACTTTTTA  750

seq1  AAATAAATCTCTTGTGTGAATTCAGGCTCTATTGAAAAGC-TTCCAGTAA  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAATAAATCTCTTGTGTGAATTCAGGCTCTATTGAAAAGCTTTCCAGTAA  800

seq1  ATTATATGTTTGTTGTTGGAATCCTCCATGATACTCTTATTATTCATTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATGTTTGTTGTTGGAATCCTCCATGATACTCTTATTATTCATTTA  850

seq1  TTTTCAATTTGACAGCTACTTCTACTGTGCTAACACAAACATCAGAACGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAATTTGACAGCTACTTCTACTGTGCTAACACAAACATCAGAACGA  900

seq1  GGCTAGGGCGCGAG-TGCAGAGGAGTGCCAGACTATCATCCATAGCAGAC  948
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGCTAGGGCGCGAGTTGCAGAGGAGTGCCAGACTATCATCCATAGCAGAC  950

seq1  TTCAAATGCCGAGCGCCTTGCATACATATTAAACATATGAATGAAAATAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATGCCGAGCGCCTTGCATACATATTAAACATATGAATGAAAATAC  1000

seq1  AGTACTCCTGACTTTCAGGCTGTGAACTCAAGTGTCCTCTTTACCAGTCT  1048
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGTACTCCTGACTTTCA-GCTGTGAACTCAAGTGTCCTCTTTACCAGTCT  1049

seq1  CTTAGCTTAAGGACATTCCAGTCCCAACCTGACCGGTTTGCAGGAGAGTT  1098
      |||||| |||||||||| |||| ||||||||| ||| |||||||| | ||
seq2  CTTAGC-TAAGGACATT-CAGTTCCAACCTGATCGGGTTGCAGGA-AATT  1096

seq1  CATCACAGGAAATCTAGGGACTCCTTGTCACTTTAGAAT  1137
      ||||||| |||||||| ||||||  ||||||  ||||||
seq2  CATCACA-GAAATCTA-GGACTC--TGTCAC--TAGAAT  1129

seq1: chr2_61071888_61072280
seq2: B6Ng01-154E03.g_66_458 (reverse)

seq1  CCTCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGACC  50

seq1  CAGCACCATGGAAACCTTACTTGGGACAGGTGCAGCTAAAACCATGGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCATGGAAACCTTACTTGGGACAGGTGCAGCTAAAACCATGGGGC  100

seq1  TTTCTTCACTCCCATCCAGTACTTCTCATTCTGCTCCCAGGTAATCCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCACTCCCATCCAGTACTTCTCATTCTGCTCCCAGGTAATCCTAT  150

seq1  GTCAAGGACTCACTAGAACGAATGTCTTTTGTTTGTTTGTTTGTTTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGACTCACTAGAACGAATGTCTTTTGTTTGTTTGTTTGTTTGTCT  200

seq1  TGGTTTTTTGAGATGGGGTTTCTCAGTATGGCCCTGGAACTCACTCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTTGAGATGGGGTTTCTCAGTATGGCCCTGGAACTCACTCTGTA  250

seq1  GACTTGGCTGGCCTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGCTGGCCTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGT  300

seq1  GCTGGGATTAAAGTTATGCGTCACCACTGCCAGGCTACAAATGTCTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATTAAAGTTATGCGTCACCACTGCCAGGCTACAAATGTCTTAAG  350

seq1  AAGTAAAAGTTCCATTCGTAGATGGCCAGCACAAAGTGAATTC  393
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAGTTCCATTCGTAGATGGCCAGCACAAAGTGAATTC  393