BAC Information

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BAC

Clone NameB6Ng01-154I05
Chromosome2 (Build37)
Map Location 8,576,496 - 8,690,899
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC672230
Downstream geneLOC100040710, LOC100040548, LOC100040566
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154I05.bB6Ng01-154I05.g
ACCDH949537DH949538
length1,2281,119
definitionDH949537|Mus musculus domesticus DNA, BAC clone: B6Ng01-154I05, 5' end.DH949538|Mus musculus domesticus DNA, BAC clone: B6Ng01-154I05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,689,652 - 8,690,899)(8,576,496 - 8,577,549)
sequence
gaattcatcatcgttgtctcattggaaacttggcagttaacatcatagca
agaactgaaaaacaatagagtcttcctcactccggaaccacgcctgtcta
tgaaagttcttccaggtccttactatacatctttattttctggatgactc
aaagcaaaaaaacaagcaaagcaatagaacagccccattagttgtggggt
gtgatcttgatatcagtttttacccctccacctcttgtcactaagaactg
caaataattaaaaataattaggaatccagtgcctaagctgacacaatttc
aacagttagcataaagagaaattgtctttgctattctcattttcttttaa
taaaaaacaaaaacaaaaaacaaacaacaaacaaacaaaacaagagttga
caacaagacaggaaggtgtcaggtcaagattcttccttttatgtcctttc
attttctttacaagccctgtgtctttagaaggcttagccacaggtttttt
tgcatgaccattttagcatacagagaatcacatcagatccagttggaaga
caagagcaaatcattaagccaaaactcaaaattcactctaaatgaactct
acaacaaacatatcaacttcctctctgaccctgtatcacattagctgaag
atattcttgctgaaaaacatttcaaatgcatgcaggcgggctcaattcta
agctagtaaactatcagtaaatatgaattgctcctcagtagaaagatatt
caaaaccacattttcttttcactgtagtaagaagctgtttcagatgcggc
attcctcagtgttcagtgctgagtgcccacacaagcatcacttacataaa
gcagaaatgcactataggaaatactattgtcagcttatcaagtgatgctc
cggaaatctcgtgtgcaaataccataattaatggtaatcagtgcagtttt
tttcttgtaaagcattaaggaaggaactattctcattgcttcaaacaata
gttagaacaagaaacgatgaaatcatctttaacactcctttagttgtact
atgaaattgtgagagtaactccaagtatacccagttagcacatcatgcca
ttgtcctaaagtgtaacgaatgcatgctgagtaacacatacatggtacat
ccttctggtccaatgaatggcttgtagtgaatgtattgcagacataaagc
tttcctcacgattacagaacacttctct

gaattcaatagtcagttccgaaagcaagaaatacatatgttcaaaataat
atttgcaaaatgtttagcatacttaaccatcaagtaactatgaatcaaac
taactctcagtttctgtctttcttagaatggctgacatcaagaaagcaaa
taaagtttgattgagtttgattggtgtttagaacgaaatctcccactcac
tatgtgggcactgaaaactggtgtagccactgtgaaaactacgtggaggt
ttcttacaaaactaaaaatagaactggcatattacctggtcaaccaactg
taggtacataaagagcttaaagttcaacacaacaggaggatttatacatg
cataactactacctcataatatccacaaaataagactagcattggtatct
atcaggagatgcaccaataacaaaaatgtactgcttttactcaattaaat
tgtattgagcattcaacaaaactgaaaatcatgaatgttcaggaaaatta
atgttactggaaatagttatgtttagtgctacaagtctgacttagagaaa
taccatgttgctccctcatatctagaacctcagtgttaatatgtgtatgt
agctctgtgtatgagtgagtgtgtatacacatgtgttgataaaagaaagg
tagtcatgagggggaaagagagcttaatctggaaaggttaacaaaatgca
tgtaagtagaaggtttaacctgtgaaaggagacaagcaactgggccatat
aaatcaaggaaagcagtggggagggtagattagtgagaacaaaaagtatg
agaacatgccatagtgccaccaatatatctgtgctatcttaaacctagtt
aaacattgaataactggctcaacagaggaagatgtgttaaaatatgacat
gtgttgggcagccgtaaaatacaagagtataaatatagccaacctataca
ggtatgtatagctcttcaaaccattcaaatgggtttaatattcttatatt
actcagctatgaggtctataacataagatttgtaaaacctctggatattt
ttattaacctcaaatattaaagcatgtaagccccttcctaatttatttat
atgaattttactgagaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_8689652_8690899
seq2: B6Ng01-154I05.b_47_1274 (reverse)

seq1  AGAGAAAGTGTTCTGTTATGCTGAAGGGAAGGGTTTTTAGTCTGGCAACT  50
      |||| ||||||||||| ||  |||  |||| | ||| | |||| |||| |
seq2  AGAG-AAGTGTTCTGTAATCGTGA--GGAAAGCTTTAT-GTCT-GCAA-T  44

seq1  ACATTCCTACTAACAAGCAATCAATGGGAACACAGAAAGAATGTTACAAT  100
      ||||||  ||| |||||| ||  || ||| ||    ||| ||| ||| ||
seq2  ACATTC--ACT-ACAAGCCATTCATTGGACCA---GAAGGATG-TACCAT  87

seq1  GTTTAATGTGTTAACTCAGCATGGCATTCTGTTACACTCTAGGACAATTG  150
      ||   ||||||| ||||||||| |||||| |||||||| ||||||||| |
seq2  GT---ATGTGTT-ACTCAGCAT-GCATTC-GTTACACTTTAGGACAATGG  131

seq1  CATTGATGTGCTAACTGGGTATTACTT-GAGTTACTCTCACAATTTCATA  199
      || |||||||||||||||||| ||||| ||||||||||||||||||||||
seq2  CA-TGATGTGCTAACTGGGTA-TACTTGGAGTTACTCTCACAATTTCATA  179

seq1  GTACACTAAAAGGAGTGTT-AAGATGATTTCATCGTTTCTTGTTCTAAAC  248
      |||||   ||||||||||| |||||||||||||||||||||||||| |||
seq2  GTACAACTAAAGGAGTGTTAAAGATGATTTCATCGTTTCTTGTTCT-AAC  228

seq1  TA-TGTTTGGAGCAAATGAG-ATAGTTCCTTCCTTAATGCTTTACAAGAA  296
      || |||||| ||| |||||| |||||||||||||||||||||||||||||
seq2  TATTGTTTGAAGC-AATGAGAATAGTTCCTTCCTTAATGCTTTACAAGAA  277

seq1  AACACACTGCACTGATTACCATTAATTATGGTATTTGCACACGAGATTTC  346
      || | |||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-AAACTGCACTGATTACCATTAATTATGGTATTTGCACACGAGATTTC  326

seq1  CGAAGCATCACTTGATAAGCTGACAATAGTATTTCCTATAGTGCATTTCT  396
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGCATCACTTGATAAGCTGACAATAGTATTTCCTATAGTGCATTTCT  376

seq1  GCTTTATGTAAGTGATGCTTGTGTGGGCACTCAGCACTGAACACTGAGGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATGTAAGTGATGCTTGTGTGGGCACTCAGCACTGAACACTGAGGA  426

seq1  ATGCCGCATCTGAAACAGCTTCTTACTACAGTGAAAAGAAAATGTGGTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCGCATCTGAAACAGCTTCTTACTACAGTGAAAAGAAAATGTGGTTT  476

seq1  TGAATATCTTTCTACTGAGGAGCAATTCATATTTACTGATAGTTTACTAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATCTTTCTACTGAGGAGCAATTCATATTTACTGATAGTTTACTAG  526

seq1  CTTAGAATTGAGCCCGCCTGCATGCATTTGAAATGTTTTTCAGCAAGAAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAATTGAGCCCGCCTGCATGCATTTGAAATGTTTTTCAGCAAGAAT  576

seq1  ATCTTCAGCTAATGTGATACAGGGTCAGAGAGGAAGTTGATATGTTTGTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAGCTAATGTGATACAGGGTCAGAGAGGAAGTTGATATGTTTGTT  626

seq1  GTAGAGTTCATTTAGAGTGAATTTTGAGTTTTGGCTTAATGATTTGCTCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGTTCATTTAGAGTGAATTTTGAGTTTTGGCTTAATGATTTGCTCT  676

seq1  TGTCTTCCAACTGGATCTGATGTGATTCTCTGTATGCTAAAATGGTCATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCCAACTGGATCTGATGTGATTCTCTGTATGCTAAAATGGTCATG  726

seq1  CAAAAAAACCTGTGGCTAAGCCTTCTAAAGACACAGGGCTTGTAAAGAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAACCTGTGGCTAAGCCTTCTAAAGACACAGGGCTTGTAAAGAAA  776

seq1  ATGAAAGGACATAAAAGGAAGAATCTTGACCTGACACCTTCCTGTCTTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGGACATAAAAGGAAGAATCTTGACCTGACACCTTCCTGTCTTGT  826

seq1  TGTCAACTCTTGTTTTGTTTGTTTGTTGTTTGTTTTTTGTTTTTGTTTTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAACTCTTGTTTTGTTTGTTTGTTGTTTGTTTTTTGTTTTTGTTTTT  876

seq1  TATTAAAAGAAAATGAGAATAGCAAAGACAATTTCTCTTTATGCTAACTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAGAAAATGAGAATAGCAAAGACAATTTCTCTTTATGCTAACTG  926

seq1  TTGAAATTGTGTCAGCTTAGGCACTGGATTCCTAATTATTTTTAATTATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTGTGTCAGCTTAGGCACTGGATTCCTAATTATTTTTAATTATT  976

seq1  TGCAGTTCTTAGTGACAAGAGGTGGAGGGGTAAAAACTGATATCAAGATC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTCTTAGTGACAAGAGGTGGAGGGGTAAAAACTGATATCAAGATC  1026

seq1  ACACCCCACAACTAATGGGGCTGTTCTATTGCTTTGCTTGTTTTTTTGCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCCACAACTAATGGGGCTGTTCTATTGCTTTGCTTGTTTTTTTGCT  1076

seq1  TTGAGTCATCCAGAAAATAAAGATGTATAGTAAGGACCTGGAAGAACTTT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCATCCAGAAAATAAAGATGTATAGTAAGGACCTGGAAGAACTTT  1126

seq1  CATAGACAGGCGTGGTTCCGGAGTGAGGAAGACTCTATTGTTTTTCAGTT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACAGGCGTGGTTCCGGAGTGAGGAAGACTCTATTGTTTTTCAGTT  1176

seq1  CTTGCTATGATGTTAACTGCCAAGTTTCCAATGAGACAACGATGATGAAT  1246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTATGATGTTAACTGCCAAGTTTCCAATGAGACAACGATGATGAAT  1226

seq1  TC  1248
      ||
seq2  TC  1228


seq1: chr2_8576496_8577549
seq2: B6Ng01-154I05.g_149_1184

seq1  GTAACTATGAATCAAACTAACTCTCAGTTTCTGTCTTTCTTAGAATGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTATGAATCAAACTAACTCTCAGTTTCTGTCTTTCTTAGAATGGCT  50

seq1  GACATCAAGAAAGCAAATAAAGTTTGATTGAGTTTGATTGGTGTTTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAAGAAAGCAAATAAAGTTTGATTGAGTTTGATTGGTGTTTAGAA  100

seq1  CGAAATCTCCCACTCACTATGTGGGCACTGAAAACTGGTGTAGCCACTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAATCTCCCACTCACTATGTGGGCACTGAAAACTGGTGTAGCCACTGT  150

seq1  GAAAACTACGTGGAGGTTTCTTACAAAACTAAAAATAGAACTGGCATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTACGTGGAGGTTTCTTACAAAACTAAAAATAGAACTGGCATATT  200

seq1  ACCTGGTCAACCAACTGTAGGTACATAAAGAGCTTAAAGTTCAACACAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTCAACCAACTGTAGGTACATAAAGAGCTTAAAGTTCAACACAAC  250

seq1  AGGAGGATTTATACATGCATAACTACTACCTCATAATATCCACAAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGATTTATACATGCATAACTACTACCTCATAATATCCACAAAATAA  300

seq1  GACTAGCATTGGTATCTATCAGGAGATGCACCAATAACAAAAATGTACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGCATTGGTATCTATCAGGAGATGCACCAATAACAAAAATGTACTG  350

seq1  CTTTTACTCAATTAAATTGTATTGAGCATTCAACAAAACTGAAAATCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACTCAATTAAATTGTATTGAGCATTCAACAAAACTGAAAATCATG  400

seq1  AATGTTCAGGAAAATTAATGTTACTGGAAATAGTTATGTTTAGTGCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCAGGAAAATTAATGTTACTGGAAATAGTTATGTTTAGTGCTACA  450

seq1  AGTCTGACTTAGAGAAATACCATGTTGCTCCCTCATATCTAGAACCTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGACTTAGAGAAATACCATGTTGCTCCCTCATATCTAGAACCTCAG  500

seq1  TGTTAATATGTGTATGTAGCTCTGTGTATGAGTGAGTGTGTATACACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATATGTGTATGTAGCTCTGTGTATGAGTGAGTGTGTATACACATG  550

seq1  TGTTGATAAAAGAAAGGTAGTCATGAGGGGGAAAGAGAGCTTAATCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATAAAAGAAAGGTAGTCATGAGGGGGAAAGAGAGCTTAATCTGGA  600

seq1  AAGGTTAACAAAATGCATGTAAGTAGAAGGTTTAACCTGTGAAAGGAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTAACAAAATGCATGTAAGTAGAAGGTTTAACCTGTGAAAGGAGAC  650

seq1  AAGCAACTGGGCCATATAAATCAAGGAAAGCAGTGGGGAGGGTAGATTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACTGGGCCATATAAATCAAGGAAAGCAGTGGGGAGGGTAGATTAG  700

seq1  TGAGAACAAAAAGTATGAGAACATGCCATAGTGCCACCAATATATCTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACAAAAAGTATGAGAACATGCCATAGTGCCACCAATATATCTGTG  750

seq1  CTATCTTAAAACCTAGTTAAACATTGAATAACTGGCTCAACAGAGGAAGA  800
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTT-AAACCTAGTTAAACATTGAATAACTGGCTCAACAGAGGAAGA  799

seq1  TGTGTTAAAAATATGACATGTGTTGGGCAGCCGTAAAATACAAGAGTTAT  850
      |||||| ||||||||||||||||||||||||||||||||||||||| |||
seq2  TGTGTT-AAAATATGACATGTGTTGGGCAGCCGTAAAATACAAGAG-TAT  847

seq1  AAATATAGCCAACCTATACAGGTATGTAATAGCTCTTCAAACCATTCAAA  900
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  AAATATAGCCAACCTATACAGGTATGT-ATAGCTCTTCAAACCATTC-AA  895

seq1  ATGGGTTTAAATATTCTTATAATTAACTCAGCTAATGAAGGTCTATAACA  950
      |||||||| ||||||||||||  | |||||||| ||| ||||||||||||
seq2  ATGGGTTT-AATATTCTTATA--TTACTCAGCT-ATG-AGGTCTATAACA  940

seq1  TAAGATATGTAAATACTCTTGAATATTTCTAATTAAACTTCAAATATTAA  1000
      |||||| ||||||  ||| || |||||| ||  | ||| |||||||||||
seq2  TAAGATTTGTAAAACCTC-TGGATATTTTTA--TTAACCTCAAATATTAA  987

seq1  AGCATGTAAAGCCCCTTTCTAAATTTATATTATATGAATTTTAACTGAAG  1050
      ||||||| ||||||||| || ||||||| ||||||||||||| |||| ||
seq2  AGCATGT-AAGCCCCTTCCT-AATTTAT-TTATATGAATTTT-ACTG-AG  1032

seq1  AAAA  1054
      ||||
seq2  AAAA  1036


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