BAC Information

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BAC

Clone NameB6Ng01-154I06
Chromosome2 (Build37)5 (Build37)
Map Location 134,196,185 - 134,197,3358,554,641 - 8,555,179
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneA430048G15Rik, Bmp2
Downstream geneHao1, Txndc13, LOC627897, LOC433478, Plcb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154I06.bB6Ng01-154I06.g
ACCDH949539DH949540
length1,145978
definitionDH949539|Mus musculus domesticus DNA, BAC clone: B6Ng01-154I06, 5' end.DH949540|Mus musculus domesticus DNA, BAC clone: B6Ng01-154I06, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(134,196,185 - 134,197,335)(8,554,641 - 8,555,179)
sequence
gaattcctcagatgtgtttaacagagctaggttcaaacttctaagagctg
gatttttggagagtaattggcatggtgctttctgattgatagcagtctag
ccaagattaagcttgaaatcaaactgaaagccttccacagttaagcactg
ataagttatttatgtatttattgacataggatttataacttatttactgc
ctgagttatgcttggctgaattaatactgttaaaatataaataagcattt
gacccctaaaatgtctctttgagaaatctttgctactttaaaaaacaaat
caaaattattatgtaagagtgtggagaaataggggcataatttaagcaga
agaatatcaaggagctgtcttcagtggtggccagaataatctattgattt
ctaactagcacatgttgcctgtttgtttactcaaaagtgaatgagagtgt
agcaggcatggggtgaatcttaatgccctttggtgcaccagctccactct
gcttgtaagtttaatgtagaattaagagttcaatgtaatgaacaagtact
tcagttaaaagtttcccacaaaaaatgccatacagaataacaattaagaa
aataatttctaggttccaactgcctgactgacaaattgcttaaccccaga
aattccctccagtatcttcatctggaaaactgaaaataataaacagttgt
taaatatttcaactctgataaaatcgttttaatgctagtgtttctttgtt
tatattctgcatgcccgaagacaaattacataatttttctaggcttgaat
tctctagtttatgaaatggtaattataacagagccctgccaagccattcc
tgagtgaagtggaatctaaattatacactatgccaaattgcctttccaaa
agattatgaactttttccactatccctgggtattagcagtttacttttaa
acaaatcatgggatagcaatgggattttttattaaacaaccctagtcttt
caacattcatacaatgatcattttactgtatccagatgttcttagaatta
ttgtgtcttaacattctttgtatgctatggattcgaactgtttgttcaat
cagcttctattatttcctagttgagcatttatctgttctaagagc
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttattctttgaa
tagttcttcttgtttccacttggttgatttcacccctgagtttgattatt
tcctgccgtctactcctcttgggtgaatttacttccttttttctagagct
tttagatgtgtgtcagctgctagtatgtgctctctccgttttttctgaag
cactcatagctatgagtttcctcttaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134196185_134197335
seq2: B6Ng01-154I06.b_49_1193

seq1  GAATTCCTCAGATGTGTTTAACAGAGCTAGGTTCAAACTTCTAAGAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGATGTGTTTAACAGAGCTAGGTTCAAACTTCTAAGAGCTG  50

seq1  GATTTTTGGAGAGTAATTGGCATGGTGCTTTCTGATTGATAGCAGTCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTGGAGAGTAATTGGCATGGTGCTTTCTGATTGATAGCAGTCTAG  100

seq1  CCAAGATTAAGCTTGAAATCAAACTGAAAGCCTTCCACAGTTAAGCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATTAAGCTTGAAATCAAACTGAAAGCCTTCCACAGTTAAGCACTG  150

seq1  ATAAGTTATTTATGTATTTATTGACATAGGATTTATAACTTATTTACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTTATTTATGTATTTATTGACATAGGATTTATAACTTATTTACTGC  200

seq1  CTGAGTTATGCTTGGCTGAATTAATACTGTTAAAATATAAATAAGCATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTATGCTTGGCTGAATTAATACTGTTAAAATATAAATAAGCATTT  250

seq1  GACCCCTAAAATGTCTCTTTGAGAAATCTTTGCTACTTTAAAAAACAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCTAAAATGTCTCTTTGAGAAATCTTTGCTACTTTAAAAAACAAAT  300

seq1  CAAAATTATTATGTAAGAGTGTGGAGAAATAGGGGCATAATTTAAGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTATTATGTAAGAGTGTGGAGAAATAGGGGCATAATTTAAGCAGA  350

seq1  AGAATATCAAGGAGCTGTCTTCAGTGGTGGCCAGAATAATCTATTGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATCAAGGAGCTGTCTTCAGTGGTGGCCAGAATAATCTATTGATTT  400

seq1  CTAACTAGCACATGTTGCCTGTTTGTTTACTCAAAAGTGAATGAGAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAGCACATGTTGCCTGTTTGTTTACTCAAAAGTGAATGAGAGTGT  450

seq1  AGCAGGCATGGGGTGAATCTTAATGCCCTTTGGTGCACCAGCTCCACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCATGGGGTGAATCTTAATGCCCTTTGGTGCACCAGCTCCACTCT  500

seq1  GCTTGTAAGTTTAATGTAGAATTAAGAGTTCAATGTAATGAACAAGTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTAAGTTTAATGTAGAATTAAGAGTTCAATGTAATGAACAAGTACT  550

seq1  TCAGTTAAAAGTTTCCCACAAAAAATGCCATACAGAATAACAATTAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAAAAGTTTCCCACAAAAAATGCCATACAGAATAACAATTAAGAA  600

seq1  AATAATTTCTAGGTTCCAACTGCCTGACTGACAAATTGCTTAACCCCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTCTAGGTTCCAACTGCCTGACTGACAAATTGCTTAACCCCAGA  650

seq1  AATTCCCTCCAGTATCTTCATCTGGAAAACTGAAAATAATAAACAGTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCTCCAGTATCTTCATCTGGAAAACTGAAAATAATAAACAGTTGT  700

seq1  TAAATATTTCAACTCTGATAAAATCGTTTTAATGCTAGTGTTTCTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTCAACTCTGATAAAATCGTTTTAATGCTAGTGTTTCTTTGTT  750

seq1  TATATTCTGCATGCCCGAAGACAAATTACATAATTTTTCTAGGCTTGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCTGCATGCCCGAAGACAAATTACATAATTTTTCTAGGCTTGAAT  800

seq1  TCTCTAGTTTATGAAATGGTAATTATAACAGAGCCCTGCCAAGCCATTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGTTTATGAAATGGTAATTATAACAGAGCCCTGCCAAGCCATTCC  850

seq1  TGAGTGAAGTGGAATCTAAATTATACACTATGCCAAATTGCCTTCCCAAA  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGAGTGAAGTGGAATCTAAATTATACACTATGCCAAATTGCCTTTCCAAA  900

seq1  AGATTATGAACTTTTTCCACTATCCCTGGGTATTAGCAGTTTACTTTTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATGAACTTTTTCCACTATCCCTGGGTATTAGCAGTTTACTTTTAA  950

seq1  ACAAATCATGGGATAGCAATGGGA-TTTTTATTAAACAACCCTAGTCTTT  999
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACAAATCATGGGATAGCAATGGGATTTTTTATTAAACAACCCTAGTCTTT  1000

seq1  CATACATTCATACAATGATCATTTTAACTGTAATCCAGATG-TCTTAGAA  1048
      || |||||||||||||||||||||| ||||| ||||||||| ||||||||
seq2  CA-ACATTCATACAATGATCATTTT-ACTGT-ATCCAGATGTTCTTAGAA  1047

seq1  TTATTGTGTCTTAACATTCTTTGTATGCTATGGATTCCGAACAGTTTGTC  1098
      |||||||||||||||||||||||||||||||||||| ||||| |||||| 
seq2  TTATTGTGTCTTAACATTCTTTGTATGCTATGGATT-CGAACTGTTTGTT  1096

seq1  CAATTCAGCTTCTAATTAATTTCCCCAGTGAGCATTTATCCTGTTCTAGG  1148
      ||| ||||||||||  | ||||||    ||||||||||| |||||||| |
seq2  CAA-TCAGCTTCTA--TTATTTCCTAGTTGAGCATTTAT-CTGTTCTAAG  1142

seq1  AGC  1151
      |||
seq2  AGC  1145

seq1: chr5_8554641_8555179
seq2: B6Ng01-154I06.g_65_603 (reverse)

seq1  GGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGAAATAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGAAATAGAAG  50

seq1  CAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGACGGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGACGGGTTT  100

seq1  AGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCAGTTCTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCAGTTCTGCA  150

seq1  CAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAACTCATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAACTCATTTT  200

seq1  ATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAG  250

seq1  ATAGAGAACTTCAGACCAATTTCTCTTATGAACATCGATGCAAAAATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAACTTCAGACCAATTTCTCTTATGAACATCGATGCAAAAATTCT  300

seq1  TAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGCAATCATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGCAATCATCC  350

seq1  ATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATA  400

seq1  CGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAAAAA  450

seq1  CCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGATCCAAC  500

seq1  ACCCATTCATGATAAAAGTTCTGGAAAGATCAGGAATTC  539
      |||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTCATGATAAAAGTTCTGGAAAGATCAGGAATTC  539