BAC Information

Click to search

BAC

Clone NameB6Ng01-154I10
Chromosome2 (Build37)
Map Location 77,251,194 - 77,252,310
singlet/doubletsinglet
Overlap geneZfp533
Upstream geneOsbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1, LOC623706, LOC667906
Downstream geneBC003993, LOC667920, OTTMUSG00000016703
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154I10.bB6Ng01-154I10.g
ACCDH949547DH949548
length8421,099
definitionDH949547|Mus musculus domesticus DNA, BAC clone: B6Ng01-154I10, 5' end.DH949548|Mus musculus domesticus DNA, BAC clone: B6Ng01-154I10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaaaagctctatgggtagctcatgggttttctgaccaaagtcag
aataactgctataaatgttttttggatattccaaccaagtcagaaatcct
gctagagtatttcaaaaaaatgtaattcttgggttttcctatcaaaatca
gaaagccataaaaaattctaaaagagctgtgttcgatcttcatacagcct
tctatgaatagctgctagaaaacattctaatagagctatgtcagctctct
gattcttttttatgtatgtatgtatgtatgtatgtatgtatgtatattag
atattttctttatttacatttcaaatgtcctggtttttcctccgaaaact
ccctacccccttcccacctccccctgctcaccaacccacccactcccgct
ttctggccctggaattcccctatactggggcattgagccttcacagggcc
acgatcctctcctcacactgatgaccgactaggccatcctctactacata
tatgcagctggagccatgagtcccaccaagcgaactctttggttggtgat
ttagtccctgggagctctgagggtactggttagttcattgttgtttctcc
tgtgggtcagctccttaggtcctttctctagctccttcattggggaccct
gtgctcagtccaatggatggctgtaagcatccatttctgtatttgtcagg
ctttggcagagcctcagaagacagctctatcaggctcctgtcagcaagca
tttgttgcatacacaatagtgtccgcgtttggtgattgtatatgggatgg
atccccatgtggggcattctctgaatatcctttccttcagtc
gaattcctcagacatcatttgttcttattttaggctttcagctttctttc
tttcttttttttttgttgttgttttttgtttgtttgttttgttttgtttg
ttttttttcttacagaaggtcatctttgacataagctcttaaagtatata
ttttttcattttaattgtgtgtgtgtgtgagagagagagtagatgcctcc
aatgttcaagtgtcagatcccctggagctgctgtaagctgcttgccctga
gtgctgggaaccaaagttgagtcccctgcaagcttctaaccctctctcca
gccccgagacactgtcttttcaagaggctccactttgctgttctaaggta
ccctgtagctggaattaagcacctcattctaacctctaatctctggacct
gttggagatggctcagcaggtagaggcacctcctgcctaccctgacatgg
ctctgtggatacatgtgcctgcagccaggtctcacagacagaatttgatc
ccccggaccctcaagatggaagaagagaactaactcccccaagctctcct
ctgatctccacacaggcaccaccgtggatcaagaccttctctcccgtgaa
ttctttagctttatggtagaactcttgcttgggaggtaggaagttctgca
ttagatccctagcccagccaattaaatgataaacaaacaaacaaacaaac
agaattaatcacttccagagtctagtgcccacttgtccctagaggctctc
ctgctgaccaccatccaacccagccagggtgccccacaaggcaggtgggg
gcaggagggaacttacagctaagatgcttgggctccgctgcagcttgttg
taggggctgtatttcggcttcagcggttttcctgccacgcggtctttatg
ccttcggcttgaaatgtgctgaaagaagtatgtcgcattagctgactctt
tgtttgtttcctaagacagatagctgattctcattccaccttctaaggtg
gtttgggtacaaacgacaacacacaacaaacaacactttctgtttccctt
ctggaggacgtttctttctagccaatgtcctgttccttggtgatgttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_77251194_77252310
seq2: B6Ng01-154I10.g_66_1164

seq1  GAATTCCTCAGACATCATTTGTTCTTATTTTAGGCTTTCAGCTTTCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGACATCATTTGTTCTTATTTTAGGCTTTCAGCTTTCTTTC  50

seq1  TTTCTTTTTTTTTTGTTGTTGTTTTTTGTTTGTTTGTTTTGTTTTGTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTTTTTGTTGTTGTTTTTTGTTTGTTTGTTTTGTTTTGTTTG  100

seq1  TTTTTTTTCTTACAGAAGGTCATCTTTGACATAAGCTCTTAAAGTATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCTTACAGAAGGTCATCTTTGACATAAGCTCTTAAAGTATATA  150

seq1  TTTTTTCATTTTAATTGTGTGTGTGTGTGAGAGAGAGAGTAGATGCCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCATTTTAATTGTGTGTGTGTGTGAGAGAGAGAGTAGATGCCTCC  200

seq1  AATGTTCAAGTGTCAGATCCCCTGGAGCTGCTGTAAGCTGCTTGCCCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCAAGTGTCAGATCCCCTGGAGCTGCTGTAAGCTGCTTGCCCTGA  250

seq1  GTGCTGGGAACCAAAGTTGAGTCCCCTGCAAGCTTCTAACCCTCTCTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGGAACCAAAGTTGAGTCCCCTGCAAGCTTCTAACCCTCTCTCCA  300

seq1  GCCCCGAGACACTGTCTTTTCAAGAGGCTCCACTTTGCTGTTCTAAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCGAGACACTGTCTTTTCAAGAGGCTCCACTTTGCTGTTCTAAGGTA  350

seq1  CCCTGTAGCTGGAATTAAGCACCTCATTCTAACCTCTAATCTCTGGACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTAGCTGGAATTAAGCACCTCATTCTAACCTCTAATCTCTGGACCT  400

seq1  GTTGGAGATGGCTCAGCAGGTAGAGGCACCTCCTGCCTACCCTGACATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGATGGCTCAGCAGGTAGAGGCACCTCCTGCCTACCCTGACATGG  450

seq1  CTCTGTGGATACATGTGCCTGCAGCCAGGTCTCACAGACAGAATTTGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGGATACATGTGCCTGCAGCCAGGTCTCACAGACAGAATTTGATC  500

seq1  CCCCGGACCCTCAAGATGGAAGAAGAGAACTAACTCCCCCAAGCTCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGGACCCTCAAGATGGAAGAAGAGAACTAACTCCCCCAAGCTCTCCT  550

seq1  CTGATCTCCACACAGGCACCACCGTGGATCAAGACCTTCTCTCCCGTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTCCACACAGGCACCACCGTGGATCAAGACCTTCTCTCCCGTGAA  600

seq1  TTCTTTAGCTTTATGGTAGAACTCTTGCTTGGGAGGTAGGAAGTTCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGCTTTATGGTAGAACTCTTGCTTGGGAGGTAGGAAGTTCTGCA  650

seq1  TTAGATCCCTAGCCCAGCCAATTAAATGATAAACAAACAAACAAACAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATCCCTAGCCCAGCCAATTAAATGATAAACAAACAAACAAACAAAC  700

seq1  AGAATTAATCACTTCCAGAGTCTAGTGCCCACTTGTCCCTAGAGGCTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAATCACTTCCAGAGTCTAGTGCCCACTTGTCCCTAGAGGCTCTC  750

seq1  CTGCTGACCACCATCCAACCCAGCCAGGGTGCCCCACAAGGCAGGGTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGCTGACCACCATCCAACCCAGCCAGGGTGCCCCACAAGGCA-GGTGGG  799

seq1  GGCAGGAGGGAACTTACAGCTAAGATGCTTGGGCTCCGCTGCAGCTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAGGGAACTTACAGCTAAGATGCTTGGGCTCCGCTGCAGCTTGTT  849

seq1  GTAGGGGCTGTATTTCGGCTTCAGCGGTTTTCCTGCCACGCGGTCTTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGGCTGTATTTCGGCTTCAGCGGTTTTCCTGCCACGCGGTCTTTAT  899

seq1  GCCTTCGGCTTGAAATGTGCTGAAAGAAGTATGTCGCATTAGCTGACTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCGGCTTGAAATGTGCTGAAAGAAGTATGTCGCATTAGCTGACTCT  949

seq1  TTGTTTGTTTCCT-AGACAAGGATAGCTGATTTCTCCATTCCCACCTTCT  999
      ||||||||||||| |||||  ||||||||| |||| |||| |||||||||
seq2  TTGTTTGTTTCCTAAGACA--GATAGCTGA-TTCT-CATT-CCACCTTCT  994

seq1  AAGGTGGGTTGGGTACCAAAACAGACAAACAAACAAACAAACAAACAAAC  1049
      ||||||| ||||||||  |||| |||     |||| || ||||||||   
seq2  AAGGTGGTTTGGGTAC--AAAC-GAC-----AACACAC-AACAAACA---  1032

seq1  AAACTTTCTGTTCCCCTACAGAGAGGACGTTTCCTTCTAGCCCAATGTCC  1099
      | |||||||||| |||| | | ||||||||||| |||||| |||||||||
seq2  ACACTTTCTGTTTCCCTTCTG-GAGGACGTTTCTTTCTAG-CCAATGTCC  1080

seq1  CTGTCCTT-GTGATGTTCT  1117
         ||||| ||||||||||
seq2  TGTTCCTTGGTGATGTTCT  1099