BAC Information

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BAC

Clone NameB6Ng01-154L14
Chromosome2 (Build37)
Map Location 171,859,385 - 171,975,242
singlet/doubletdoublet
Overlap geneCbln4
Upstream geneLOC100043743, LOC100043744
Downstream geneMc3r, 2010011I20Rik, Aurka, Cstf1, F730031O20Rik, 2410001C21Rik, A330041C17Rik, 1700029J11Rik, LOC629957, Tcfap2c, LOC100043750, Bmp7, LOC100043751, Spo11, Rae1, Rbm38, Ctcfl, EG619800
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154L14.bB6Ng01-154L14.g
ACCDH949693DH949694
length1,180153
definitionDH949693|Mus musculus domesticus DNA, BAC clone: B6Ng01-154L14, 5' end.DH949694|Mus musculus domesticus DNA, BAC clone: B6Ng01-154L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(171,859,385 - 171,860,553)(171,975,090 - 171,975,242)
sequence
gaattcatcaatgttggttgacaatgtttgtttcaaaaattaaagtgggg
gctggggagatggctcagcagggaatggataccacacaaacaagagaatc
tgagtccagatcgccaggacccaggtacagtggcatgtgtctgtaacccc
agggcctgggaggtgaagccaggaaattcactaaggcttaatggacagca
aggatagccaattggtgagctccgaaacccctgtctcaaataaggtcaga
gcaaccaaagaagcgactcaatgtgggcctctggccttcacacacacaca
cacacacacacacacacacacacacacacacacacacgtacatacaggta
tacacacatgacaaacatgtaacaggtttatacacaagactaacgtgtac
acatgatataaagcaataatttgcttaaaagaaaaagtagaggctagaga
ctaaaagaatacaagagagaataactaaaagtcaaaacaaagaggtcagc
aaacttaactcagtaataatactttaatttttttaaaaatttaattagat
caatgaagtccgtcctagaccatggacagctccctcaaagcgtgtggaat
cgggcggattccctgcacagctctttccttcagcttggtttgagtgagtt
tctttcaggaggaaactgctcccgctgtatcccaagcacttcctgtgtct
gactgaaactttgtagccaactgcagccaactgcttctttgcaactaaag
taactaaagctcagagagacaaaaacaaacaaacaaaaaacaaacaaaca
atcaaaaaaaactctgccagagtcacagggataggggaaggaagttcgca
gggctacatcctgtatctacccaaccttgtcagtgcttttgtgactatat
caccccctccttttgcttgttctcactcaagccagttttatttttttatt
ttatttttctgaacaatgtatcttgtgatagcttctaaacctcctaagaa
cctagttaaggttgaacccccattagtctccattctgtctgattctcttc
cacgtggacttcagcatcacagaacggatgccacaagtctcaggtccttc
ccccaaccacacaattgatgtgcattccaggatgcatgtttaagacttag
ttgatgcgtaggtaagacataaagctcagc
tcagggcaggccgatggaaaggctgatgggctctctctccatttgctgat
ggatgaggactcaaaggtcttgattccttttcactgtttgtgagtagcag
gactggctctgattgcagtctcctccctctccctctccctctccctctcc
ctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_171859385_171860553
seq2: B6Ng01-154L14.b_46_1225

seq1  GAATTCATCAATGTTGGTTGACAATGTTTGTTTCAAAAATTAAAGTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAATGTTGGTTGACAATGTTTGTTTCAAAAATTAAAGTGGGG  50

seq1  GCTGGGGAGATGGCTCAGCAGGGAATGGATACCACACAAACAAGAGAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGAGATGGCTCAGCAGGGAATGGATACCACACAAACAAGAGAATC  100

seq1  TGAGTCCAGATCGCCAGGACCCAGGTACAGTGGCATGTGTCTGTAACCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCAGATCGCCAGGACCCAGGTACAGTGGCATGTGTCTGTAACCCC  150

seq1  AGGGCCTGGGAGGTGAAGCCAGGAAATTCACTAAGGCTTAATGGACAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCTGGGAGGTGAAGCCAGGAAATTCACTAAGGCTTAATGGACAGCA  200

seq1  AGGATAGCCAATTGGTGAGCTCCGAAACCCCTGTCTCAAATAAGGTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGCCAATTGGTGAGCTCCGAAACCCCTGTCTCAAATAAGGTCAGA  250

seq1  GCAACCAAAGAAGCGACTCAATGTGGGCCTCTGGCCTTCACACACACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCAAAGAAGCGACTCAATGTGGGCCTCTGGCCTTCACACACACACA  300

seq1  CACACACACACACACACACACACACACACACACACACGTACATACAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACGTACATACAGGTA  350

seq1  TACACACATGACAAACATGTAACAGGTTTATACACAAGACTAACGTGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACATGACAAACATGTAACAGGTTTATACACAAGACTAACGTGTAC  400

seq1  ACATGATATAAAGCAATAATTTGCTTAAAAGAAAAAGTAGAGGCTAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATATAAAGCAATAATTTGCTTAAAAGAAAAAGTAGAGGCTAGAGA  450

seq1  CTAAAAGAATACAAGAGAGAATAACTAAAAGTCAAAACAAAGAGGTCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGAATACAAGAGAGAATAACTAAAAGTCAAAACAAAGAGGTCAGC  500

seq1  AAACTTAACTCAGTAATAATACTTTAATTTTTTTAAAAATTTAATTAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAACTCAGTAATAATACTTTAATTTTTTTAAAAATTTAATTAGAT  550

seq1  CAATGAAGTCCGTCCTAGACCATGGACAGCTCCCTCAAAGCGTGTGGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAGTCCGTCCTAGACCATGGACAGCTCCCTCAAAGCGTGTGGAAT  600

seq1  CGGGCGGATTCCCTGCACAGCTCTTTCCTTCAGCTTGGTTTGAGTGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCGGATTCCCTGCACAGCTCTTTCCTTCAGCTTGGTTTGAGTGAGTT  650

seq1  TCTTTCAGGAGGAAACTGCTCCCGCTGTATCCCAAGCACTTCCTGTGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAGGAGGAAACTGCTCCCGCTGTATCCCAAGCACTTCCTGTGTCT  700

seq1  GACTGAAACTTTGTAGCCAACTGCAGCCAACTGCTTCTTTGCAACTAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAAACTTTGTAGCCAACTGCAGCCAACTGCTTCTTTGCAACTAAAG  750

seq1  TAACTAAAGCTCAGAGAGACAAAAACAAACAAACAAAAAACAAACAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAAGCTCAGAGAGACAAAAACAAACAAACAAAAAACAAACAAACA  800

seq1  ATCAAAAAAAAC-CTGCCAGAGTCACAGGGATA-GGGAAGGAAGTTCGCA  848
      |||||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  ATCAAAAAAAACTCTGCCAGAGTCACAGGGATAGGGGAAGGAAGTTCGCA  850

seq1  GGGCTACATCCTGTATCTACCCAACCTTGTCAGTGCTTTTGTGACTATAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTACATCCTGTATCTACCCAACCTTGTCAGTGCTTTTGTGACTATAT  900

seq1  CA-CCCCTCCTTTTGCTTGTTCTCACTCAAGCCAGTTTTA-TTTTTTATT  946
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CACCCCCTCCTTTTGCTTGTTCTCACTCAAGCCAGTTTTATTTTTTTATT  950

seq1  TTA-TTTTCTGAACAATGTATC-TGTGATAGC-TCTAAACCTCCT-AGAA  992
      ||| |||||||||||||||||| ||||||||| |||||||||||| ||||
seq2  TTATTTTTCTGAACAATGTATCTTGTGATAGCTTCTAAACCTCCTAAGAA  1000

seq1  CCTAGTTAA-GTTGAACCCCCA-TAGTTCTCATCCTGGCCTGA-TCTCTT  1039
      ||||||||| |||||||||||| ||||   ||| || | |||| ||||||
seq2  CCTAGTTAAGGTTGAACCCCCATTAGTCTCCATTCT-GTCTGATTCTCTT  1049

seq1  -CACGTGGACTTCAGCATCACAGACCGGATGGCCAC-AGTCTCAGGT-CT  1086
       ||||||||||||||||||||||| ||||| ||||| |||||||||| ||
seq2  CCACGTGGACTTCAGCATCACAGAACGGAT-GCCACAAGTCTCAGGTCCT  1098

seq1  TCCCC--AACACACAATGGATTGTGCATTCCAAGATGCATGTGTTAGACT  1134
      |||||  | |||||||| || ||||||||||| ||||||||| | |||||
seq2  TCCCCCAACCACACAATTGA-TGTGCATTCCAGGATGCATGTTTAAGACT  1147

seq1  TAGTTAGATGCGTAAGTTAGGACATAAAGCTCAGC  1169
      ||||| ||||||| || || |||||||||||||||
seq2  TAGTT-GATGCGT-AGGTAAGACATAAAGCTCAGC  1180

seq1: chr2_171975090_171975242
seq2: B6Ng01-154L14.g_74_226 (reverse)

seq1  GAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGGAGACTGCAATCAGAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGGAGACTGCAATCAGAGCCA  50

seq1  GTCCTGCTACTCACAAACAGTGAAAAGGAATCAAGACCTTTGAGTCCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGCTACTCACAAACAGTGAAAAGGAATCAAGACCTTTGAGTCCTCA  100

seq1  TCCATCAGCAAATGGAGAGAGAGCCCATCAGCCTTTCCATCGGCCTGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCAGCAAATGGAGAGAGAGCCCATCAGCCTTTCCATCGGCCTGCCC  150

seq1  TGA  153
      |||
seq2  TGA  153