BAC Information

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BAC

Clone NameB6Ng01-154L20
Chromosome2 (Build37)
Map Location 112,384,305 - 112,551,886
singlet/doubletdoublet
Overlap geneAven, Ryr3
Upstream geneOlfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5
Downstream gene4930563P21Rik, Fmn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154L20.bB6Ng01-154L20.g
ACCDH949703DH949704
length1,124999
definitionDH949703|Mus musculus domesticus DNA, BAC clone: B6Ng01-154L20, 5' end.DH949704|Mus musculus domesticus DNA, BAC clone: B6Ng01-154L20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,384,305 - 112,385,438)(112,550,875 - 112,551,886)
sequence
gaattcacgtgttcagtgtgtgcacagcaaggccacttgctgcttctagc
ttgcagtcctccttgctggcttgcaaaccttctgtgctgctttttcctag
tccttgatctagtgacctgtaacttgtttagtgtaactaaggagcagcac
agagagggggagaggaatgtctcccaggcagggggagaaagagagggctg
tagctgtgggtgtgtgagaggcttaagagtcaatggtaggcctaaagata
gacttgtattgggcttcctactagactctggaacttccttgaaatatgca
tgaaagaaagcacagtgtagatagcaatgcagctctcatagctttgcatt
ctaacccaggcaaatgggaggcatcagagccaggagtctaggtgtgctgg
tgggaaacttagaaagcaggtgatgtttctgctggcttttacacagcagg
caggactgtaccacacaggaagctgtgcatggaggatgctgtgctttaga
cccgagatggagtgtgagtgaagggttggacatgttaggcaagtcctgac
tgccgccgccagtgcagcatcaggtctgaaggaattagacatacctttaa
tcaatcccaacactcgggaggcagaggcaggcggatttctgagttcgagg
ccagcctggtctacaaagtgagttccaggacagccagggctacacagaga
aaccctgtcttaaaaaaaacaaaaacaaaaacaaaaacaaaaaaaaccca
accaacccaccaaccaaccaaaccaagagagagagagagagagagagaga
gagagagagagagagaaagagagatttaatgtgctataatcacctggaat
tgctatacttttgtctggcttttcctatatatacattgaatctgagattc
acccagggtcagtaatttcctttacttctgagtgttttttagcacatggg
ccacagcatagcctggtctgtgtctactagctctcttactgaatagacat
ttgtttagattcaggtttgagtgtataaaaatacccagagcttgatagca
ggtcctcatgtgaagagcttcacttcttggtaaaatacccatggatgatt
gctgggttcaaggggctttatcct
gaattcaaggccagcctgagacatgtctcaaacaaaaacagcatagtaaa
ctgaatgtcatgctttcctcaaacccttaccccccctcccctgctaatct
agacccctcagatctccaagaagccctatagatcagctgccctcctctgg
gatgatcattaccttatttgttttttggtgcttaagaaacccattggcag
ccgggcagtggtggtgcacgactttatttacagcactacagcagaggcag
gcgaatttctgagttcaaggccagcctggtctacagagtgagttctagga
gagccaggactacacagagaaaccctgtcttgaaaaacaaaaaaaaaaaa
aaaaaaaaaaacaaaaaaaaaaaaaagaagaagaaagaaagaaatccatt
ggctcttttgttactaattattggtaaataaccctttgcattttgcactg
ttatataaaactcaaattcctcaatgtcattcagcatttgaatttctaag
actggcttgaatgtagctaacaatagcagcactttgttttgttgcttttt
ttttttttaattttctctctttctttttatcctctttaactcctgacgtg
caataggctctaaataaatgctattagccaattttctgttctcgaagcca
ccaaaagagggaaacttttggaaaatgaatatatgtcccacagtcaagaa
accatgaatacatgaatatttagtaccctgcctgtcacactagagtttgg
gagatccacaccgtggaaaatcattgtttttgatggaacttcagtttagt
taggtcagggagttcacttgtcacagcttcctgcatctgacctcctggac
catgaaatgccaatgctgggctacagagagcacaacactgaatggtgatc
ttctggcaatgcatagacacatttgtagagacagtagagtattcttacat
cttcttgtctcagaaatgactgagattagatgtactactttgactgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112384305_112385438
seq2: B6Ng01-154L20.b_46_1169

seq1  GAATTCACGTGTTCAGTGTGTGCACAGCAAGGCCACTTGCTGCTTCTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGTGTTCAGTGTGTGCACAGCAAGGCCACTTGCTGCTTCTAGC  50

seq1  TTGCAGTCCTCCTTGCTGGCTTGCAAACCTTCTGTGCTGCTTTTTCCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTCCTCCTTGCTGGCTTGCAAACCTTCTGTGCTGCTTTTTCCTAG  100

seq1  TCCTTGATCTAGTGACCTGTAACTTGTTTAGTGTAACTAAGGAGCAGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGATCTAGTGACCTGTAACTTGTTTAGTGTAACTAAGGAGCAGCAC  150

seq1  AGAGAGGGGGAGAGGAATGTCTCCCAGGCAGGGGGAGAAAGAGAGGGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGGGAGAGGAATGTCTCCCAGGCAGGGGGAGAAAGAGAGGGCTG  200

seq1  TAGCTGTGGGTGTGTGAGAGGCTTAAGAGTCAATGGTAGGCCTAAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTGGGTGTGTGAGAGGCTTAAGAGTCAATGGTAGGCCTAAAGATA  250

seq1  GACTTGTATTGGGCTTCCTACTAGACTCTGGAACTTCCTTGAAATATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTATTGGGCTTCCTACTAGACTCTGGAACTTCCTTGAAATATGCA  300

seq1  TGAAAGAAAGCACAGTGTAGATAGCAATGCAGCTCTCATAGCTTTGCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAAAGCACAGTGTAGATAGCAATGCAGCTCTCATAGCTTTGCATT  350

seq1  CTAACCCAGGCAAATGGGAGGCATCAGAGCCAGGAGTCTAGGTGTGCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCCAGGCAAATGGGAGGCATCAGAGCCAGGAGTCTAGGTGTGCTGG  400

seq1  TGGGAAACTTAGAAAGCAGGTGATGTTTCTGCTGGCTTTTACACAGCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAACTTAGAAAGCAGGTGATGTTTCTGCTGGCTTTTACACAGCAGG  450

seq1  CAGGACTGTACCACACAGGAAGCTGTGCATGGAGGATGCTGTGCTTTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTGTACCACACAGGAAGCTGTGCATGGAGGATGCTGTGCTTTAGA  500

seq1  CCCGAGATGGAGTGTGAGTGAAGGGTTGGACATGTTAGGCAAGTCCTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGATGGAGTGTGAGTGAAGGGTTGGACATGTTAGGCAAGTCCTGAC  550

seq1  TGCCGCCGCCAGTGCAGCATCAGGTCTGAAGGAATTAGACATACCTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGCCGCCAGTGCAGCATCAGGTCTGAAGGAATTAGACATACCTTTAA  600

seq1  TCAATCCCAACACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCCAACACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGG  650

seq1  CCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGA  700

seq1  AACCCTGTCTTAAAAAAAACAAAAACAAAAACAAAAACAAAAAAAACCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGTCTTAAAAAAAACAAAAACAAAAACAAAAACAAAAAAAACCCA  750

seq1  ACCAACCAACCAACCAACCAAACCAAGAGAGAGAGAGAGAGAGAGAGAGA  800
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCCACCAACCAACCAAACCAAGAGAGAGAGAGAGAGAGAGAGAGA  800

seq1  GAGAGAGAGAGAGAGAAAGAGAGAATTAATGTGCTATAATCACCTGGAAT  850
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAAAGAGAGATTTAATGTGCTATAATCACCTGGAAT  850

seq1  TGCTATACTTTTGTCTGGCTTTTCCTATATAATACATTGATTCTGAGATT  900
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  TGCTATACTTTTGTCTGGCTTTTCCTATAT-ATACATTGAATCTGAGATT  899

seq1  CACCCA-GGTCAGTAATTCCCTTTACTTCTGAGTTGTTTTTTTAGCACAT  949
      |||||| ||||||||||| |||||||||||||||   |||||||||||||
seq2  CACCCAGGGTCAGTAATTTCCTTTACTTCTGAGT--GTTTTTTAGCACAT  947

seq1  -GGCCACAGCATAGCCT-GTCTGTGTCTACTAGCTCTCTTACTG-ATAGA  996
       |||||||||||||||| |||||||||||||||||||||||||| |||||
seq2  GGGCCACAGCATAGCCTGGTCTGTGTCTACTAGCTCTCTTACTGAATAGA  997

seq1  CATTTGTTTTAGATTCAGGTTTGAGATGTTATAAAATACCCAGAGCCTTG  1046
      |||||| |||||||||||||||||| |||   ||||||||||||| ||||
seq2  CATTTG-TTTAGATTCAGGTTTGAG-TGTATAAAAATACCCAGAG-CTTG  1044

seq1  ATATGCAAGTCCTCATGTGAAAGAGCTTCACTTCTTTTGAGTAAAATACC  1096
      ||| ||| ||||||||||| ||||||||||||||||    ||||||||||
seq2  ATA-GCAGGTCCTCATGTG-AAGAGCTTCACTTCTT---GGTAAAATACC  1089

seq1  CAGGGATAGAATTGCTGGGTCAGAGGGGGCTTTATCCT  1134
      || ||||   ||||||||||   | |||||||||||||
seq2  CATGGAT--GATTGCTGGGT-TCAAGGGGCTTTATCCT  1124

seq1: chr2_112550875_112551886
seq2: B6Ng01-154L20.g_67_1065 (reverse)

seq1  CAGCAGTCAAAGTAGTTACAATTCTAATCTCAGTTCATTTCTGAGACCAA  50
      ||||||||||||||| ||||  ||||||||||| |||||||||||| |||
seq2  CAGCAGTCAAAGTAG-TACA--TCTAATCTCAG-TCATTTCTGAGA-CAA  45

seq1  GAGGATGTAGGAATACTTCCTACCTGTTCTTCTACAAATGTGTCTATGCA  100
      || |||||| |||||||  ||| ||||   ||||||||||||||||||||
seq2  GAAGATGTAAGAATACT--CTA-CTGT--CTCTACAAATGTGTCTATGCA  90

seq1  TTTGCCAGGAAAGATCACCATTCAGTGTTGTGCTCTCTGTAGCCCAGCAT  150
       |||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  -TTGCCAG--AAGATCACCATTCAGTGTTGTGCTCTCTGTAGCCCAGCAT  137

seq1  TGGCATTTCATGGTCCAGGAGGTCAGATGCAGGAAGCTGTGACAAGTGGA  200
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGCATTTCATGGTCCAGGAGGTCAGATGCAGGAAGCTGTGACAAGTGAA  187

seq1  CTCCCTGACCTAACTAAACTGAAGTTCCATCAAAAACAATGATTTTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGACCTAACTAAACTGAAGTTCCATCAAAAACAATGATTTTCCAC  237

seq1  GGTGTGGATCTCCCAAACTCTAGTGTGACAGGCAGGGTACTAAATATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGATCTCCCAAACTCTAGTGTGACAGGCAGGGTACTAAATATTCA  287

seq1  TGTATTCATGGTTTCTTGACTGTGGGACATATATTCATTTTCCAAAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCATGGTTTCTTGACTGTGGGACATATATTCATTTTCCAAAAGTT  337

seq1  TCCCTCTTTTGGTGGCTTCGAGAACAGAAAATTGGCTAATAGCATTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTTTTGGTGGCTTCGAGAACAGAAAATTGGCTAATAGCATTTATT  387

seq1  TAGAGCCTATTGCACGTCAGGAGTTAAAGAGGATAAAAAGAAAGAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCCTATTGCACGTCAGGAGTTAAAGAGGATAAAAAGAAAGAGAGAA  437

seq1  AATTAAAAAAAAAAAAAGCAACAAAACAAAGTGCTGCTATTGTTAGCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAAAAAAAAAAGCAACAAAACAAAGTGCTGCTATTGTTAGCTAC  487

seq1  ATTCAAGCCAGTCTTAGAAATTCAAATGCTGAATGACATTGAGGAATTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGCCAGTCTTAGAAATTCAAATGCTGAATGACATTGAGGAATTTG  537

seq1  AGTTTTATATAACAGTGCAAAATGCAAAGGGTTATTTACCAATAATTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTATATAACAGTGCAAAATGCAAAGGGTTATTTACCAATAATTAGT  587

seq1  AACAAAAGAGCCAATGGATTTCTTTCTTTCTTCTTCTTTTTTTTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAGAGCCAATGGATTTCTTTCTTTCTTCTTCTTTTTTTTTTTTTT  637

seq1  GTTTTTTTTTTTTTTTTTTTTTTTGTTTTTCAAGACAGGGTTTCTCTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTTTTTTTTTTTTTTTTTGTTTTTCAAGACAGGGTTTCTCTGTG  687

seq1  TAGTCCTGGCTCTCCTAGAACTCACTCTGTAGACCAGGCTGGCCTTGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTGGCTCTCCTAGAACTCACTCTGTAGACCAGGCTGGCCTTGAAC  737

seq1  TCAGAAATTCGCCTGCCTCTGCTGTAGTGCTGTAAATAAAGTCGTGCACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATTCGCCTGCCTCTGCTGTAGTGCTGTAAATAAAGTCGTGCACC  787

seq1  ACCACTGCCCGGCTGCCAATGGGTTTCTTAAGCACCAAAAAACAAATAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGCCCGGCTGCCAATGGGTTTCTTAAGCACCAAAAAACAAATAAG  837

seq1  GTAATGATCATCCCAGAGGAGGGCAGCTGATCTATAGGGCTTCTTGGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGATCATCCCAGAGGAGGGCAGCTGATCTATAGGGCTTCTTGGAGA  887

seq1  TCTGAGGGGTCTAGATTAGCAGGGGAGGGGGGGTAAGGGTTTGAGGAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGGGTCTAGATTAGCAGGGGAGGGGGGGTAAGGGTTTGAGGAAAG  937

seq1  CATGACATTCAGTTTACTATGCTGTTTTTGTTTGAGACATGTCTCAGGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACATTCAGTTTACTATGCTGTTTTTGTTTGAGACATGTCTCAGGCT  987

seq1  GGCCTTGAATTC  1012
      ||||||||||||
seq2  GGCCTTGAATTC  999