BAC Information

Click to search

BAC

Clone NameB6Ng01-154O08
Chromosome2 (Build37)
Map Location 107,976,421 - 107,976,973
singlet/doubletsinglet
Overlap genenone
Upstream geneKcna4
Downstream geneLOC100043078, LOC668790, LOC623003, LOC100043423, LOC623031, Mett5d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154O08.bB6Ng01-154O08.g
ACCDH949818DH949819
length1,0351,159
definitionDH949818|Mus musculus domesticus DNA, BAC clone: B6Ng01-154O08, 5' end.DH949819|Mus musculus domesticus DNA, BAC clone: B6Ng01-154O08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatattcctcagacagaagtaatatcaccaaaaaccccaacaaa
ttatttatattttaagggttatttatacaaagaagtcactatgatgtccg
tggtcattattactaccatcaaaagacaaatttgaattgggattcacata
actctaccctaccagttcctttgctgtcctttttggacccactataagct
cacagtatagcctgtgctagcaggctcccaattttctggctactggttcg
ggttaactggtgcagagtattggtaagaactggatgagctattattacaa
cttcaagttttcaaacagctttaggtttttgttttctattgttaaaggtc
attgcttttgccagggagtgctctctttattttctttttattagatattt
tcttcatttacatttcaaatgctatccccaaagccccctataccgctccc
cccccctctgctccccaacccaatcacttcctgtttcctggccttggcat
tcccctgtaatggcgcatataatcttagcaaaacaaagggcctctcctcc
cattgatggccaactaggctatcctctgcgacatataaagatagagacaa
gttctggaggtactggttagttcatattgttgttcctcctatagagtggc
aaaccccttctgctccttgggtactttctctgagtccttcattggggaca
ctgtgatccatccaatagatgactgtgagcatcctcttctgtatttgcca
ggcactggcatagcctcacaggagacagctatattagggtcctttcacca
aaaccttgctggcatatgcaatagtgtctggccttgggtggttgtttatg
ggatggatccctgggtggggcactctctcggtggtcctttctttcagtct
cagatccaaaccttgtctctgtaactctttccatggcattttgtccccat
tctaaggagaaacgaaatatcacattttggtcttcttcttcttgagtttc
atgtgttttgaaattttatcttgggtattctaagt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttgatg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atgaggagctagagaaagtagccaaggagctaagggatcttcaaccctat
aggtgaacaacattatgactaacagtaccctgagctcttgacctctagct
gcatatgtaaccaaagatgctagtcgccatcactgggaaagagagtcatg
actctcaactttgtgtgtcctgtacagggtaacgccaggtcaagtgcgaa
gtgttgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_107976421_107976973
seq2: B6Ng01-154O08.b_48_600 (reverse)

seq1  ATGGGAGGAGAGGCCCTTTGTTTTGCTAAGATTATATGCGCCATTACAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGGAGAGGCCCTTTGTTTTGCTAAGATTATATGCGCCATTACAGG  50

seq1  GGAATGCCAAGGCCAGGAAACAGGAAGTGATTGGGTTGGGGAGCAGAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCCAAGGCCAGGAAACAGGAAGTGATTGGGTTGGGGAGCAGAGGG  100

seq1  GGGGGGAGCGGTATAGGGGGCTTTGGGGATAGCATTTGAAATGTAAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGAGCGGTATAGGGGGCTTTGGGGATAGCATTTGAAATGTAAATGA  150

seq1  AGAAAATATCTAATAAAAAGAAAATAAAGAGAGCACTCCCTGGCAAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATATCTAATAAAAAGAAAATAAAGAGAGCACTCCCTGGCAAAAGC  200

seq1  AATGACCTTTAACAATAGAAAACAAAAACCTAAAGCTGTTTGAAAACTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCTTTAACAATAGAAAACAAAAACCTAAAGCTGTTTGAAAACTTG  250

seq1  AAGTTGTAATAATAGCTCATCCAGTTCTTACCAATACTCTGCACCAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTAATAATAGCTCATCCAGTTCTTACCAATACTCTGCACCAGTTA  300

seq1  ACCCGAACCAGTAGCCAGAAAATTGGGAGCCTGCTAGCACAGGCTATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGAACCAGTAGCCAGAAAATTGGGAGCCTGCTAGCACAGGCTATACT  350

seq1  GTGAGCTTATAGTGGGTCCAAAAAGGACAGCAAAGGAACTGGTAGGGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTTATAGTGGGTCCAAAAAGGACAGCAAAGGAACTGGTAGGGTAG  400

seq1  AGTTATGTGAATCCCAATTCAAATTTGTCTTTTGATGGTAGTAATAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGTGAATCCCAATTCAAATTTGTCTTTTGATGGTAGTAATAATGA  450

seq1  CCACGGACATCATAGTGACTTCTTTGTATAAATAACCCTTAAAATATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGGACATCATAGTGACTTCTTTGTATAAATAACCCTTAAAATATAAA  500

seq1  TAATTTGTTGGGGTTTTTGGTGATATTACTTCTGTCTGAGGAATATGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGTTGGGGTTTTTGGTGATATTACTTCTGTCTGAGGAATATGGAA  550

seq1  TTC  553
      |||
seq2  TTC  553