BAC Information

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BAC

Clone NameB6Ng01-154P24
Chromosome2 (Build37)
Map Location 110,940,839 - 111,088,136
singlet/doubletdoublet
Overlap geneLOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275
Upstream geneLOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15
Downstream geneOlfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154P24.bB6Ng01-154P24.g
ACCDH949896DH949897
length1,1061,063
definitionDH949896|Mus musculus domesticus DNA, BAC clone: B6Ng01-154P24, 5' end.DH949897|Mus musculus domesticus DNA, BAC clone: B6Ng01-154P24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,087,051 - 111,088,136)(110,940,839 - 110,941,909)
sequence
gaattcttgctggggagatactagctaggataagtgacgctgaaaacccg
ggaccataccatcaccaggcgctgaaaaggtgaccccccgtttcaagggg
gcagattcagaactacgggacactaaagctctgtaaggtacgttcggtct
tgaactttctccagcgttagaggccttttaaggggggcagatgatcctgg
aggaagtccaagacagtctatcagagacagagaggggagagagattagga
gttaagaggaaacaaggtgcacctaagtagaaaacaggccttttcaagga
ccttgagcctgaggaaaagagaattaagggaaaaaaatgccctgggagag
ttcagaaaaggagaagggagagagaaaaaggaagaaatataaaaagagaa
aaagaaaagaaactaaaatataaagatacaaaagataatgtaaaatataa
agatacaaaggataatataaaaaatgaagaacaaaaaaaaaatttaagtc
aatttaccctcctctcaaggactttgactaaagaggcagccttcatcaaa
ggcttaaagatagctctcagggccactgtgcctcctctcccttctctggc
agtattcccagaagaaggagataaggaagtagagtctgaacatgagagag
agagaaaataagttttagaaaagcaattattcccctgtttgggatctttt
agcaaaaaaagaggaaaaaatgaaaataagctatttcagagctctcctgg
gaacaaaaggaaaacgggagacatcctgcttcctctgtggctcctatgga
gatattcttagctctggttaggttatctgtgtccctttgagacaccaagt
tttattccctgtctgtccattttctgtttttggtgcaccaatttccatat
gtctgtcaattcatgtttgtttttgttttgtgtttgaatgattattgttc
tgtgtttcatgttgaaaaatataattggttaaaactttaatcttgctggc
tgtcatcctttaacttgttgaaaaagcagctcattgcacagcagaagtga
taaagcactgtgactgggagtcaggtacagctgaaaagccctgcctgagt
gattgc
gaattccatgcattattttctaaggactttacaataatataaatggattt
cctattttcaattagcaagtattcttgaaatcaaaagaaacatgttttca
aacacagcaaaaagagaaatataaaatgttaaaaaattcagaaatatata
aaataatcaagaaatcagtgcattgttgttgataaagctaagttcttctc
aattaagattatcctacatctcataataaaagaggaataaaagaaaggaa
cagtgaataataaaaaataagaacaaatctctaaaatgttaatcagatat
atatttttgaaattaattttaaactatgaagaaatgaatataaaggcatt
tacataagaaaatttcatttagctatgataaattgtattgtaaaagaaaa
taccaaagtagcaattaacacttagcattgacttacagatatatgagtag
tgctctcaagatggttttgatttttcattaattcatcttttaattcagct
tctgtcgatttttttattaatttgaaattaaaaagcagaaataaaaatga
ggactagcactttgaatggagcagtctttatatccaaagactaaagttta
aattttcttattgtaataattatatatttgtttttataactttaatgcta
aagttttacattctaagaccatgtagagaccccaacttggcatccatcct
atctgcagacactaaaccctgacacttttgctcatgcattaactgtttgc
agacaggagcccaggagggctgtcctcttagaggctctgcaggcacctga
ttaatacagcggcatactcatagtcaaccttcggcttgagcccagggacc
tgaatggaaggaagagggaaagactgaaggagctgaagcagtctgcaaac
ccataagaacataatataaactaactcgaccacccagaggaccgagggcc
taaatcacaatcagatatacatgggtgggttcattgctcttcgtacatta
tatattatagcagattgcttatctgcattaatggggaggggagtccttgc
tgtggaggtttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111087051_111088136
seq2: B6Ng01-154P24.b_81_1157 (reverse)

seq1  GCAATCGGCCCTCA-GCAGGGCTTTTTCAGCTGTACCTGACTCCCAGTCA  49
      |||||   | |||| ||||||| |||||||||||||||||||||||||||
seq2  GCAAT---CACTCAGGCAGGGC-TTTTCAGCTGTACCTGACTCCCAGTCA  46

seq1  CAGTGCTTTTATCACTTTCTGCTGTGCAAATTGAGGCTGCTTTTCAAACA  99
      |||||| |||||||| |||||||||||||  ||| |||||||||  ||||
seq2  CAGTGC-TTTATCAC-TTCTGCTGTGCAA--TGA-GCTGCTTTTTCAACA  91

seq1  AGTTAAAGGATGGACAGCCAGC-AGA-TAAAGTTTTAACCAATTATATTT  147
      ||||||||||| |||||||||| ||| |||||||||||||||||||||||
seq2  AGTTAAAGGAT-GACAGCCAGCAAGATTAAAGTTTTAACCAATTATATTT  140

seq1  TTCAACATGAAACACAGAACAATAATCATTCAAACAACAAAACAAAAACA  197
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTCAACATGAAACACAGAACAATAATCATTCAAAC-ACAAAACAAAAACA  189

seq1  AACATGAATTGACAGACATATGGAAATTTGGTGCACCAAAAACAGAAAAT  247
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AACATGAATTGACAGACATATGGAAA-TTGGTGCACCAAAAACAGAAAAT  238

seq1  GGACAGACAGGGAATAAAACTTGGTGTCTCAAAGGGACACAGATAACCTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGACAGGGAATAAAACTTGGTGTCTCAAAGGGACACAGATAACCTA  288

seq1  ACCAGAGCTAAGAATATCTCCATAGGAGCCACAGAGGAAGCAGGATGTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGCTAAGAATATCTCCATAGGAGCCACAGAGGAAGCAGGATGTCT  338

seq1  CCCGTTTTCCTTTTGTTCCCAGGAGAGCTCTGAAATAGCTTATTTTCATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTTTTCCTTTTGTTCCCAGGAGAGCTCTGAAATAGCTTATTTTCATT  388

seq1  TTTTCCTCTTTTTTTGCTAAAAGATCCCAAACAGGGGAATAATTGCTTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCTTTTTTTGCTAAAAGATCCCAAACAGGGGAATAATTGCTTTT  438

seq1  CTAAAACTTATTTTCTCTCTCTCTCATGTTCAGACTCTACTTCCTTATCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACTTATTTTCTCTCTCTCTCATGTTCAGACTCTACTTCCTTATCT  488

seq1  CCTTCTTCTGGGAATACTGCCAGAGAAGGGAGAGGAGGCACAGTGGCCCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTCTGGGAATACTGCCAGAGAAGGGAGAGGAGGCACAGTGGCCCT  538

seq1  GAGAGCTATCTTTAAGCCTTTGATGAAGGCTGCCTCTTTAGTCAAAGTCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTATCTTTAAGCCTTTGATGAAGGCTGCCTCTTTAGTCAAAGTCC  588

seq1  TTGAGAGGAGGGTAAATTGACTTAAATTTTTTTTTTGTTCTTCATTTTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGGAGGGTAAATTGACTTAAATTTTTTTTTTGTTCTTCATTTTTT  638

seq1  ATATTATCCTTTGTATCTTTATATTTTACATTATCTTTTGTATCTTTATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATCCTTTGTATCTTTATATTTTACATTATCTTTTGTATCTTTATA  688

seq1  TTTTAGTTTCTTTTCTTTTTCTCTTTTTATATTTCTTCCTTTTTCTCTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTTCTTTTCTTTTTCTCTTTTTATATTTCTTCCTTTTTCTCTCT  738

seq1  CCCTTCTCCTTTTCTGAACTCTCCCAGGGCATTTTTTTCCCTTAATTCTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTCCTTTTCTGAACTCTCCCAGGGCATTTTTTTCCCTTAATTCTC  788

seq1  TTTTCCTCAGGCTCAAGGTCCTTGAAAAGGCCTGTTTTCTACTTAGGTGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCAGGCTCAAGGTCCTTGAAAAGGCCTGTTTTCTACTTAGGTGC  838

seq1  ACCTTGTTTCCTCTTAACTCCTAATCTCTCTCCCCTCTCTGTCTCTGATA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTTTCCTCTTAACTCCTAATCTCTCTCCCCTCTCTGTCTCTGATA  888

seq1  GACTGTCTTGGACTTCCTCCAGGATCATCTGCCCCCCTTAAAAGGCCTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCTTGGACTTCCTCCAGGATCATCTGCCCCCCTTAAAAGGCCTCT  938

seq1  AACGCTGGAGAAAGTTCAAGACCGAACGTACCTTACAGAGCTTTAGTGTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCTGGAGAAAGTTCAAGACCGAACGTACCTTACAGAGCTTTAGTGTC  988

seq1  CCGTAGTTCTGAATCTGCCCCCTTGAAACGGGGGGTCACCTTTTCAGCGC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTAGTTCTGAATCTGCCCCCTTGAAACGGGGGGTCACCTTTTCAGCGC  1038

seq1  CTGGTGATGGTATGGTCCCGGGTTTTCAGCGTCACTTAT  1086
      |||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGATGGTATGGTCCCGGGTTTTCAGCGTCACTTAT  1077

seq1: chr2_110940839_110941909
seq2: B6Ng01-154P24.g_66_1128

seq1  GAATTCCATGCATTATTTTCTAAGGACTTTACAATAATATAAATGGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCATTATTTTCTAAGGACTTTACAATAATATAAATGGATTT  50

seq1  CCTATTTTCAATTAGCAAGTATTCTTGAAATCAAAAGAAACATGTTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTTCAATTAGCAAGTATTCTTGAAATCAAAAGAAACATGTTTTCA  100

seq1  AACACAGCAAAAAGAGAAATATAAAATGTTAAAAAATTCAGAAATATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGCAAAAAGAGAAATATAAAATGTTAAAAAATTCAGAAATATATA  150

seq1  AAATAATCAAGAAATCAGTGCATTGTTGTTGATAAAGCTAAGTTCTTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCAAGAAATCAGTGCATTGTTGTTGATAAAGCTAAGTTCTTCTC  200

seq1  AATTAAGATTATCCTACATCTCATAATAAAAGAGGAATAAAAGAAAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGATTATCCTACATCTCATAATAAAAGAGGAATAAAAGAAAGGAA  250

seq1  CAGTGAATAATAAAAAATAAGAACAAATCTCTAAAATGTTAATCAGATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAATAATAAAAAATAAGAACAAATCTCTAAAATGTTAATCAGATAT  300

seq1  ATATTTTTGAAATTAATTTTAAACTATGAAGAAATGAATATAAAGGCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTGAAATTAATTTTAAACTATGAAGAAATGAATATAAAGGCATT  350

seq1  TACATAAGAAAATTTCATTTAGCTATGATAAATTGTATTGTAAAAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAGAAAATTTCATTTAGCTATGATAAATTGTATTGTAAAAGAAAA  400

seq1  TACCAAAGTAGCAATTAACACTTAGCATTGACTTACAGATATATGAGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAAGTAGCAATTAACACTTAGCATTGACTTACAGATATATGAGTAG  450

seq1  TGCTCTCAAGATGGTTTTGATTTTTCATTAATTCATCTTTTAATTCAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCAAGATGGTTTTGATTTTTCATTAATTCATCTTTTAATTCAGCT  500

seq1  TCTGTCGATTTTTTTATTAATTTGAAATTAAAAAGCAGAAATAAAAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCGATTTTTTTATTAATTTGAAATTAAAAAGCAGAAATAAAAATGA  550

seq1  GGACTAGCACTTTGAATGGAGCAGTCTTTATATCCAAAGACTAAAGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAGCACTTTGAATGGAGCAGTCTTTATATCCAAAGACTAAAGTTTA  600

seq1  AATTTTCTTATTGTAATAATTATATATTTGTTTTTATAACTTTAATGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTTATTGTAATAATTATATATTTGTTTTTATAACTTTAATGCTA  650

seq1  AAGTTTTACATTCTAAGACCATGTAGAGACCCCAACTTGGCATCCATCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTACATTCTAAGACCATGTAGAGACCCCAACTTGGCATCCATCCT  700

seq1  ATCTGCAGACACTAAACCCTGACACTTTTGCTCATGCATTAACTGTTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCAGACACTAAACCCTGACACTTTTGCTCATGCATTAACTGTTTGC  750

seq1  AGACAGGAGCCCAGGAGGGCTGTCCTCTTAGAGGCTCTGCAGGCACCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGAGCCCAGGAGGGCTGTCCTCTTAGAGGCTCTGCAGGCACCTGA  800

seq1  TTAATACAGCGGCATACTCATAGTCAACCTTCGGCTTGAGCCCAGGGACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACAGCGGCATACTCATAGTCAACCTTCGGCTTGAGCCCAGGGACC  850

seq1  TGAATGGAAGGAAGAGGGAAAGACTGAAGGAGCTGAAGCAGTCTGCAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGAAGGAAGAGGGAAAGACTGAAGGAGCTGAAGCAGTCTGCAAAC  900

seq1  CCATAAGAACAATAATATAAACTAACTCGACCACCCAGAGGACCGAGGGC  950
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCATAAGAAC-ATAATATAAACTAACTCGACCACCCAGAGGACCGAGGGC  949

seq1  CTAAATCAACAATCAAGGATTATACATGGGTGGGTCCATTGCTCTTCGTA  1000
      ||||||| |||||||  || ||||||||||||||| ||||||||||||||
seq2  CTAAATC-ACAATCA--GA-TATACATGGGTGGGTTCATTGCTCTTCGTA  995

seq1  CA-TATATA-TATAGCAGAATTGCCTTATCTGGCATTAAT-GGGAGGGGA  1047
      || |||||| |||||||| |||| ||||||| |||||||| |||||||||
seq2  CATTATATATTATAGCAG-ATTG-CTTATCT-GCATTAATGGGGAGGGGA  1042

seq1  GGCCCTTGGCCTGTGGAGGTTTGT  1071
       | |||||  ||||||||||||||
seq2  -GTCCTTG--CTGTGGAGGTTTGT  1063