BAC Information

Click to search

BAC

Clone NameB6Ng01-155J02
Chromosome2 (Build37)
Map Location 141,411,962 - 141,587,527
singlet/doubletdoublet
Overlap genenone
Upstream geneFlrt3
Downstream geneLOC668913, LOC668914, Kif16b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155J02.bB6Ng01-155J02.g
ACCDH950315DH950316
length1,1461,046
definitionDH950315|Mus musculus domesticus DNA, BAC clone: B6Ng01-155J02, 5' end.DH950316|Mus musculus domesticus DNA, BAC clone: B6Ng01-155J02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,411,962 - 141,413,129)(141,586,474 - 141,587,527)
sequence
gaattctcattgacaatatgcgtatttcactcggcttcctctacaacagg
agcaggattgcagagataaggcaatacaccatgtcagggcccagggtgag
agtctctttctctctcatggtccactcttctcttggtctagtctgtgtgt
gataccagcatccctctgaaaacacagcccacctaccccagctgaagtga
ctatacagccctatcaaaatatattggctttattttcaattagagacttt
gcttttatcaatgtagctgaagatctgactttggttttggactgttaaag
agtattcatcacttaaaacctataagaactagtaagttatctttagaaca
ttactaaattttagtaatcactttagaacattactttagaatatcacttt
agaacattagcctgtaacttgtctgtgtactgtaatcaactgagtaaatt
tgaaaaatactatttactgtgttcctttgccaaaatagtgacttaattcc
tccctgggtttaaaaatctaacaaaattctccaggggattccaaaatgca
cttacgtttgggaaacactgatccaataccttctcaaagtggtttaacga
gactgttttgcaactcatgtacacagtagaggaagactgatttgttttga
ttaaaatattacaacttcgatttttattaaattctagtagttttaaggtt
caagggggagctatagatttgtcagtgagattcagaacacataaggaaaa
tagttggacatggggaattgggtaggttctatcctagttaatgcggagtt
gtaaaggctatgctaatgaatggcaaaaattagtattgttggttcagagt
ttattccttctaattctggatcaaggcagacagaggaatcaaatgaaggt
taaacacattgaggatgctgctgattggcaaatgaacatacttctgacca
aaatggaattctaatgtaccacttgtcccttaagtcactgccctttcttc
agtagtttcagagaggcagacaggagactcacccgtggagtgagaaattc
tgccccatgagtttactcactgtacaatcaggagagagtgaatgttctgg
ttagaacgcatagataagagagaactaggaagagacagtttctctg
gaattctccatatgacaacggaggctccagcatgaactgctctgtgtacc
tgtgcttctggagaaagagaaaactaaacaggcttcataatattttaagg
aagaaataaacttttattgaaaagcttttaggaaggggccttacatggag
tgagcgcttgccacatcacttctgagtcacattccaatgatctatctatg
gccatttgtgtaaatcacaatctcttctttatacttcattatctgtctca
aatgtgccacttagtcctctgcaaatgcggtttggattgctttcacagat
acagtggcatcacctgtgtctagcccctcactttcaggaactcctgaaat
gatgcccactcaatcactgactcactcttcccatccttgtttcctacctg
tgctacggagcataccttcctgcggtcacatgctaggcttcccaagttta
agctgccactgagtatgtcccattttgtccactggctttctttttctgaa
cctaagtgtttcatagacgatggctcctatctcagggtttctattcttgc
attgaaacaccgtgaccaaaaagcaagttggagaggaaaggattattttg
cttacgttttcatatcactgttcatcattgaaggacatcaggacagaaac
taaaacagggccgggacctggaggcaagaaatggggcagagaccatggag
gggtgatactttttggattgctccccatagcttccttagcctgcttttct
tatagaacccaggactttcagcctatggatggcatcacccacaattagct
gggtcctccatcatcaatcaccaagtaagaaagtacggtgcaagcttgca
cacagcctgatcttatggaggcattttctcaattgaggttccctccactc
agatgatgttagcttgtgccaagttgacatataacaccacatagatccaa
taatttgaaacagattaaacccctagtttacagtgaatcatcaggagctc
tgcaaatggacaaagcagaggtatcatttcactgtatttcagattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141411962_141413129
seq2: B6Ng01-155J02.b_46_1191

seq1  GAATTCTCATTGACAATATGCGTATTTCACTCGGCTTCCTCTACAACAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTGACAATATGCGTATTTCACTCGGCTTCCTCTACAACAGG  50

seq1  AGCAGGATTGCAGAGATAAGGCAATACACCATGTCAGGGCCCAGGGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGATTGCAGAGATAAGGCAATACACCATGTCAGGGCCCAGGGTGAG  100

seq1  AGTCTCTTTCTCTCTCATGGTCCACTCTTCTCTTGGTCTAGTCTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTTTCTCTCTCATGGTCCACTCTTCTCTTGGTCTAGTCTGTGTGT  150

seq1  GATACCAGCATCCCTCTGAAAACACAGCCCACCTACCCCAGCTGAAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCAGCATCCCTCTGAAAACACAGCCCACCTACCCCAGCTGAAGTGA  200

seq1  CTATACAGCCCTATCAAAATATATTGGCTTTATTTTCAATTAGAGACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAGCCCTATCAAAATATATTGGCTTTATTTTCAATTAGAGACTTT  250

seq1  GCTTTTATCAATGTAGCTGAAGATCTGACTTTGGTTTTGGACTGTTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTATCAATGTAGCTGAAGATCTGACTTTGGTTTTGGACTGTTAAAG  300

seq1  AGTATTCATCACTTAAAACCTATAAGAACTAGTAAGTTATCTTTAGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCATCACTTAAAACCTATAAGAACTAGTAAGTTATCTTTAGAACA  350

seq1  TTACTAAATTTTAGTAATCACTTTAGAACATTACTTTAGAATATCACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAATTTTAGTAATCACTTTAGAACATTACTTTAGAATATCACTTT  400

seq1  AGAACATTAGCCTGTAACTTGTCTGTGTACTGTAATCAACTGAGTAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATTAGCCTGTAACTTGTCTGTGTACTGTAATCAACTGAGTAAATT  450

seq1  TGAAAAATACTATTTACTGTGTTCCTTTGCCAAAATAGTGACTTAATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATACTATTTACTGTGTTCCTTTGCCAAAATAGTGACTTAATTCC  500

seq1  TCCCTGGGTTTAAAAATCTAACAAAATTCTCCAGGGGATTCCAAAATGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGGTTTAAAAATCTAACAAAATTCTCCAGGGGATTCCAAAATGCA  550

seq1  CTTACGTTTGGGAAACACTGATCCAATACCTTCTCAAAGTGGTTTAACGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACGTTTGGGAAACACTGATCCAATACCTTCTCAAAGTGGTTTAACGA  600

seq1  GACTGTTTTGCAACTCATGTACACAGTAGAGGAAGACTGATTTGTTTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTTTGCAACTCATGTACACAGTAGAGGAAGACTGATTTGTTTTGA  650

seq1  TTAAAATATTACAACTTCGATTTTTATTAAATTCTAGTAGTTTTAAGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATATTACAACTTCGATTTTTATTAAATTCTAGTAGTTTTAAGGTT  700

seq1  CAAGGGGGAGCTATAGATTTGTCAGTGAGATTCAGAACACATAAGGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGGAGCTATAGATTTGTCAGTGAGATTCAGAACACATAAGGAAAA  750

seq1  TAGTTGGACATGGGGAATTGGGTAGGTTCTATCCTAGTTAATGCGGAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGGACATGGGGAATTGGGTAGGTTCTATCCTAGTTAATGCGGAGTT  800

seq1  GTAAAGGCTATGCTAATGAATGGCAAAAATTAGTATTGTTGGTTCAGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGGCTATGCTAATGAATGGCAAAAATTAGTATTGTTGGTTCAGAGT  850

seq1  TTATTCCTTCTAATTCTGGATCAAGGCAGACAGAGGAATCAAATGAAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCTTCTAATTCTGGATCAAGGCAGACAGAGGAATCAAATGAAGGT  900

seq1  TAAACACATTGAGGATGCTGCTGAATTGGCAAATGAACATACTTCTGACC  950
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAAACACATTGAGGATGCTGCTG-ATTGGCAAATGAACATACTTCTGACC  949

seq1  AAAATGGAATTCTAATGTACCACTTGTCCCTTAAGTCACTGCCCTTTCCT  1000
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAAATGGAATTCTAATGTACCACTTGTCCCTTAAGTCACTGCCCTTTCTT  999

seq1  CAGTAAGTTTCCAGAGAAGGCAGACAAGGGAGAACTCACCCGTGGAGTGA  1050
      |||| ||||| ||||| |||||||||  |||| |||||||||||||||||
seq2  CAGT-AGTTT-CAGAG-AGGCAGACA--GGAG-ACTCACCCGTGGAGTGA  1043

seq1  GAAATTTCTGCCCCAATGAGTTTACCCCACTTGTTACAATACCAGGAGAG  1100
      |||| ||||||||| ||||||||| | ||||   ||||||  ||||||||
seq2  GAAA-TTCTGCCCC-ATGAGTTTA-CTCACT--GTACAAT--CAGGAGAG  1086

seq1  AGTAGAATTGGTTCTGTTTAAGAACAGCATTAGATAAGAGAGAACTAGGA  1150
      ||| ||||  |||||| || ||||| ||| ||||||||||||||||||||
seq2  AGT-GAAT--GTTCTGGTT-AGAAC-GCA-TAGATAAGAGAGAACTAGGA  1130

seq1  AGAGAGCAGTCTTCTCTG  1168
      ||||| |||| |||||||
seq2  AGAGA-CAGT-TTCTCTG  1146

seq1: chr2_141586474_141587527
seq2: B6Ng01-155J02.g_66_1111 (reverse)

seq1  GAATCTGAAATACAAGTGAAATGATTACTCTGCTTTTGTTCCATTTGCAG  50
      ||||||||||||| |||||||||||  |||||||||   |||||||||||
seq2  GAATCTGAAATAC-AGTGAAATGATACCTCTGCTTT--GTCCATTTGCAG  47

seq1  AGCT-CTGATGATTTCACTGTAAACTAGGGGTTTTAATCTTGTTTCAAAT  99
      |||| ||||||| |||||||||||||||||| ||||||| ||||||||||
seq2  AGCTCCTGATGA-TTCACTGTAAACTAGGGG-TTTAATC-TGTTTCAAAT  94

seq1  TATTTGGGATCTATGGTGGTGTTATATGTCAACTTGGCACAAGCTAACAT  149
      ||||  |||||||| |||||||||||||||||||||||||||||||||||
seq2  TATT--GGATCTAT-GTGGTGTTATATGTCAACTTGGCACAAGCTAACAT  141

seq1  CATCTGAGTGGAGGGAACCTCAATTGAGAAAATGCCTCCATAAGATCAGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAGTGGAGGGAACCTCAATTGAGAAAATGCCTCCATAAGATCAGG  191

seq1  CTGTGTGCAAGCTTGCACCGTACTTTCTTACTTGGTGATTGATGATGGAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGCAAGCTTGCACCGTACTTTCTTACTTGGTGATTGATGATGGAG  241

seq1  GACCCAGCTAATTGTGGGTGATGCCATCCATAGGCTGAAAGTCCTGGGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGCTAATTGTGGGTGATGCCATCCATAGGCTGAAAGTCCTGGGTT  291

seq1  CTATAAGAAAAGCAGGCTAAGGAAGCTATGGGGAGCAATCCAAAAAGTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGAAAAGCAGGCTAAGGAAGCTATGGGGAGCAATCCAAAAAGTAT  341

seq1  CACCCCTCCATGGTCTCTGCCCCATTTCTTGCCTCCAGGTCCCGGCCCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTCCATGGTCTCTGCCCCATTTCTTGCCTCCAGGTCCCGGCCCTG  391

seq1  TTTTAGTTTCTGTCCTGATGTCCTTCAATGATGAACAGTGATATGAAAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTTCTGTCCTGATGTCCTTCAATGATGAACAGTGATATGAAAAC  441

seq1  GTAAGCAAAATAATCCTTTCCTCTCCAACTTGCTTTTTGGTCACGGTGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCAAAATAATCCTTTCCTCTCCAACTTGCTTTTTGGTCACGGTGTT  491

seq1  TCAATGCAAGAATAGAAACCCTGAGATAGGAGCCATCGTCTATGAAACAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCAAGAATAGAAACCCTGAGATAGGAGCCATCGTCTATGAAACAC  541

seq1  TTAGGTTCAGAAAAAGAAAGCCAGTGGACAAAATGGGACATACTCAGTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTCAGAAAAAGAAAGCCAGTGGACAAAATGGGACATACTCAGTGG  591

seq1  CAGCTTAAACTTGGGAAGCCTAGCATGTGACCGCAGGAAGGTATGCTCCG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTAAACTTGGGAAGCCTAGCATGTGACCGCAGGAAGGTATGCTCCG  641

seq1  TAGCACAGGTAGGAAACAAGGATGGGAAGAGTGAGTCAGTGATTGAGTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAGGTAGGAAACAAGGATGGGAAGAGTGAGTCAGTGATTGAGTGG  691

seq1  GCATCATTTCAGGAGTTCCTGAAAGTGAGGGGCTAGACACAGGTGATGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATTTCAGGAGTTCCTGAAAGTGAGGGGCTAGACACAGGTGATGCC  741

seq1  ACTGTATCTGTGAAAGCAATCCAAACCGCATTTGCAGAGGACTAAGTGGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATCTGTGAAAGCAATCCAAACCGCATTTGCAGAGGACTAAGTGGC  791

seq1  ACATTTGAGACAGATAATGAAGTATAAAGAAGAGATTGTGATTTACACAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGAGACAGATAATGAAGTATAAAGAAGAGATTGTGATTTACACAA  841

seq1  ATGGCCATAGATAGATCATTGGAATGTGACTCAGAAGTGATGTGGCAAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCATAGATAGATCATTGGAATGTGACTCAGAAGTGATGTGGCAAGC  891

seq1  GCTCACTCCATGTAAGGCCCCTTCCTAAAAGCTTTTCAATAAAAGTTTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTCCATGTAAGGCCCCTTCCTAAAAGCTTTTCAATAAAAGTTTAT  941

seq1  TTCTTCCTTAAAATATTATGAAGCCTGTTTAGTTTTCTCTTTCTCCAGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTTAAAATATTATGAAGCCTGTTTAGTTTTCTCTTTCTCCAGAA  991

seq1  GCACAGGTACACAGAGCAGTTCATGCTGGAGCCTCCGTTGTCATATGGAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGTACACAGAGCAGTTCATGCTGGAGCCTCCGTTGTCATATGGAG  1041

seq1  AATTC  1054
      |||||
seq2  AATTC  1046