BAC Information

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BAC

Clone NameB6Ng01-155L06
Chromosome2 (Build37)
Map Location 115,580,630 - 115,718,222
singlet/doubletdoublet
Overlap geneBC052040, Mrg1
Upstream geneLOC100043222, LOC100043232, LOC100043236
Downstream geneG630016G05Rik, 2810405F15Rik, LOC433464, Tmco5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155L06.bB6Ng01-155L06.g
ACCDH950412DH950413
length1,1111,091
definitionDH950412|Mus musculus domesticus DNA, BAC clone: B6Ng01-155L06, 5' end.DH950413|Mus musculus domesticus DNA, BAC clone: B6Ng01-155L06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,580,630 - 115,581,765)(115,717,111 - 115,718,222)
sequence
gaattcattccatttgtctcagaaatgttctgggttttgccttccttccc
tatattaggaatcgtaacaaaaagtaaagcactttttgttactaatcgta
acaaaaagtaaagcaggagttgaagctcctagaaaggaaatattaagata
ttaataaaacaataaaatattaataaaatattaaaatattaagaaaatat
ttggatgcatgcttttttgacagaattatgcaacttggagttgtaaaatt
gaactaagcagtatggtttctctttccctgaaaagacaatgaataaagaa
ttatggtttacagaccttgtttcatagaaagagataacgataatcataaa
tttgaataaaaaataaatcacatgattttttttaaagaaaagttttaaaa
atagcccatcctgacaggtaaaaattactacatccttagatactttcaat
gcctaacccaagtccactgtacagacttggaaggtttgtctgtggatgga
catgcagtgaaaacagtgttggtatctcaatggaagataccttcatcagt
ttcaaaacatatttatgctaaaattttagtttcttatcacttagcagtca
tgtccagcctgttgcatttaggcaacctgagtaagaacagtggaaggttc
gggtgtcattctagaaactgagatacaaactgcaaagcttttactttgat
gctgactcaactggaagacttgtcattgtcacagggtctatgtgtgaggg
ggtcacaccacctcccagggctctcctgggtgcctggataagctatcagt
gtccctctgttctctcaccatggtccccaggccagcctgggctcacccag
cttccctgcctccatcattctcccaaattatatgtccgtgtcctctaaga
gcctctgtaaagcaccttgcaaatgcattgttcttgagaaagaaactggg
tttgcagtctagctagtgatgtaacctgagtagggtagagccagcctttc
ccatgttcccatgtctcagaacacagaagaaagaggaccacactactact
catccctactgacttcattcccttggtatatgtacagttcaaagaaagga
cactccctgcc
gaattcaaaagtagcagtaagtggtcaccgaaaagcagaccaggtgtctg
agtttttctgaaattttaatctctaacttctctgcttgcttttaagcacc
aatacccacgtttcaatgcaaaataatttaaagaccaagtagatagcaga
tatgttagtctcatatgcctaaatatctaggtaaataatttatgagctgt
aaataaagatctgctcactatatttatgcctattcgtgccactgtgggaa
gggaaacaaaacctcagaagacagagctgaaaaaaaggacttaaatttgg
ctatcaaactcattagtttgttccatgttccagtggggcatggtagatac
aatatgaaatcaaaacaaacagcacagatatattctgaaattcactctcc
aatgttcaagtggtagacataagttccacaagtgggactgtaggcaggac
ctggccattactcagaactgtttcagcaatattggagacttttctatcta
ttctttccaagacatagaaaaaaatcattaaactttataatcattcaaat
acactctcagtccttggctgaatatgaaatctttccattaattgtatgga
gtcggtagtatctcccatctgcaactgagaaataatgaatcagagataga
gaagtcagtcacaaagctaaagaattgttcattgtaaacgtaaaacattt
acctcccaatttcagcccaggaccatttctacaaagcacatgtgacaaga
gcacctatgtgacttgtgcacttgtttgagagctctccccagtctggtag
cctttccctcccgtgtttcttatttcttgctatcagagtccttcaaggag
agaccaaaagtcccctgcatccttccttctcccccatgctagctccatcc
cccaaactccattgccctggggtaatgtagcctcttcactgaaccccagg
ctttctgagactaaggcctcaggagagaagcagtgagcatgctgtgcaga
tggctcgctgtacccagtattctcagtgatgctgatacttacaccgcaga
atgtatcacaatcatctcggtcaaagcttggagcgatctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_115580630_115581765
seq2: B6Ng01-155L06.b_46_1156

seq1  GAATTCATTCCATTTGTCTCAGAAATGTTCTGGGTTTTGCCTTCCTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCATTTGTCTCAGAAATGTTCTGGGTTTTGCCTTCCTTCCC  50

seq1  TATATTAGGAATCGTAACAAAAAGTAAAGCACTTTTTGTTACTAATCGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAGGAATCGTAACAAAAAGTAAAGCACTTTTTGTTACTAATCGTA  100

seq1  ACAAAAAGTAAAGCAGGAGTTGAAGCTCCTAGAAAGGAAATATTAAGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAGTAAAGCAGGAGTTGAAGCTCCTAGAAAGGAAATATTAAGATA  150

seq1  TTAATAAAACAATAAAATATTAATAAAATATTAAAATATTAAGAAAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAAACAATAAAATATTAATAAAATATTAAAATATTAAGAAAATAT  200

seq1  TTGGATGCATGCTTTTTTGACAGAATTATGCAACTTGGAGTTGTAAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGCATGCTTTTTTGACAGAATTATGCAACTTGGAGTTGTAAAATT  250

seq1  GAACTAAGCAGTATGGTTTCTCTTTCCCTGAAAAGACAATGAATAAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAGCAGTATGGTTTCTCTTTCCCTGAAAAGACAATGAATAAAGAA  300

seq1  TTATGGTTTACAGACCTTGTTTCATAGAAAGAGATAACGATAATCATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTTTACAGACCTTGTTTCATAGAAAGAGATAACGATAATCATAAA  350

seq1  TTTGAATAAAAAATAAATCACATGATTTTTTTTAAAGAAAAGTTTTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATAAAAAATAAATCACATGATTTTTTTTAAAGAAAAGTTTTAAAA  400

seq1  ATAGCCCATCCTGACAGGTAAAAATTACTACATCCTTAGATACTTTCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCATCCTGACAGGTAAAAATTACTACATCCTTAGATACTTTCAAT  450

seq1  GCCTAACCCAAGTCCACTGTACAGACTTGGAAGGTTTGTCTGTGGATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAACCCAAGTCCACTGTACAGACTTGGAAGGTTTGTCTGTGGATGGA  500

seq1  CATGCAGTGAAAACAGTGTTGGTATCTCAATGGAAGATACCTTCATCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGTGAAAACAGTGTTGGTATCTCAATGGAAGATACCTTCATCAGT  550

seq1  TTCAAAACATATTTATGCTAAAATTTTAGTTTCTTATCACTTAGCAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAACATATTTATGCTAAAATTTTAGTTTCTTATCACTTAGCAGTCA  600

seq1  TGTCCAGCCTGTTGCATTTAGGCAACCTGAGTAAGAACAGTGGAAGGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGCCTGTTGCATTTAGGCAACCTGAGTAAGAACAGTGGAAGGTTC  650

seq1  GGGTGTCATTCTAGAAACTGAGATACAAACTGCAAAGCTTTTACTTTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTCATTCTAGAAACTGAGATACAAACTGCAAAGCTTTTACTTTGAT  700

seq1  GCTGACTCAACTGGAAGACTTGTCATTGTCACAGGGTCTATGTGTGAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTCAACTGGAAGACTTGTCATTGTCACAGGGTCTATGTGTGAGGG  750

seq1  GGTCACACCACCTCCCAGGGCTCTCCTGGGTGCCTGGATAAGCTATCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACACCACCTCCCAGGGCTCTCCTGGGTGCCTGGATAAGCTATCAGT  800

seq1  GTCCCTCTGTTCTCTCACCATGGTCCCCAGGCCAGCCTGGGCTCACCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCTGTTCTCTCACCATGGTCCCCAGGCCAGCCTGGGCTCACCCAG  850

seq1  CTTCCCTGCCTCCATCATTCTCCCAAATTATATGTCCGTGTCCTCTAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTGCCTCCATCATTCTCCCAAATTATATGTCCGTGTCCTCTAAGA  900

seq1  GCCTCTGTAAAGCACCTTGCAAATGCATTGTTCTTGAAGAAAAGAAACTG  950
      |||||||||||||||||||||||||||||||||||||   ||||||||||
seq2  GCCTCTGTAAAGCACCTTGCAAATGCATTGTTCTTGA--GAAAGAAACTG  948

seq1  GTTTTGCAGTCTAGCTAGTGATGTAACCTGAGTAGGGTAAGAGCCAGCCT  1000
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGTTTGCAGTCTAGCTAGTGATGTAACCTGAGTAGGGT-AGAGCCAGCCT  997

seq1  TTCCCATGTTTCCCATGTTCTCCAGAACACAG-AGAAAGAAGGGACCACA  1049
      |||||||| |||||||| ||| |||||||||| |||||||  ||||||||
seq2  TTCCCATG-TTCCCATG-TCT-CAGAACACAGAAGAAAGA--GGACCACA  1042

seq1  CTTACTACCTCAATTCCCTTAACTTGACTTTCATTTCCCTTGGGTAATAA  1099
      | ||||| ||||  |||||  || |||| |||| ||||||| ||||   |
seq2  C-TACTA-CTCA--TCCCT--AC-TGAC-TTCA-TTCCCTT-GGTA--TA  1080

seq1  TGTACAGTTTTCCAAAGAAAGGGACACTTCCCCTGCC  1136
      |||||||||   |||||||| |||||||  |||||||
seq2  TGTACAGTT---CAAAGAAA-GGACACT--CCCTGCC  1111

seq1: chr2_115717111_115718222
seq2: B6Ng01-155L06.g_69_1159 (reverse)

seq1  CGAGATCTGCTCCAAAGCTTTGACCCGAAGATGAATTGTGAATACCAATC  50
      ||||||| ||||| |||||||||||   ||||| |||||| ||| || ||
seq2  CGAGATC-GCTCC-AAGCTTTGACC--GAGATG-ATTGTG-ATA-CATTC  43

seq1  TGCGGTGTAAAGTATCAGGCCATCACCTGAGAATTACTGGGGTACAGCCG  100
      |||||||| |||||||||  ||||| ||||||| |||| |||||||| ||
seq2  TGCGGTGT-AAGTATCAG--CATCA-CTGAGAA-TACT-GGGTACAG-CG  86

seq1  AGCCATCCTGCACAGCAATGCTCACTGCTTTTCTCTCCCTGAGGCCCTTA  150
      |||||| ||||||||| ||||||||||||| |||   ||||||| |||||
seq2  AGCCAT-CTGCACAGC-ATGCTCACTGCTTCTCT---CCTGAGG-CCTTA  130

seq1  GTCTCAGAAAGCCTGGGGGTTCAGTGAAGAGGCTACATTAACCCAGGGCA  200
      |||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  GTCTCAGAAAGCCT-GGGGTTCAGTGAAGAGGCTACATTACCCCAGGGCA  179

seq1  ATGGAGTTTGGGGGATGGAGCTAGCATGGGGGAGAAGGAAGGATGCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTTTGGGGGATGGAGCTAGCATGGGGGAGAAGGAAGGATGCAGGG  229

seq1  GACTTTTGGTCTCTCCTTGAAGGACTCTGATAGCAAGAAATAAGAAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTGGTCTCTCCTTGAAGGACTCTGATAGCAAGAAATAAGAAACAC  279

seq1  GGGAGGGAAAGGCTACCAGACTGGGGAGAGCTCTCAAACAAGTGCACAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGAAAGGCTACCAGACTGGGGAGAGCTCTCAAACAAGTGCACAAG  329

seq1  TCACATAGGTGCTCTTGTCACATGTGCTTTGTAGAAATGGTCCTGGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATAGGTGCTCTTGTCACATGTGCTTTGTAGAAATGGTCCTGGGCTG  379

seq1  AAATTGGGAGGTAAATGTTTTACGTTTACAATGAACAATTCTTTAGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGGAGGTAAATGTTTTACGTTTACAATGAACAATTCTTTAGCTTT  429

seq1  GTGACTGACTTCTCTATCTCTGATTCATTATTTCTCAGTTGCAGATGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGACTTCTCTATCTCTGATTCATTATTTCTCAGTTGCAGATGGGA  479

seq1  GATACTACCGACTCCATACAATTAATGGAAAGATTTCATATTCAGCCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTACCGACTCCATACAATTAATGGAAAGATTTCATATTCAGCCAAG  529

seq1  GACTGAGAGTGTATTTGAATGATTATAAAGTTTAATGATTTTTTTCTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGAGTGTATTTGAATGATTATAAAGTTTAATGATTTTTTTCTATG  579

seq1  TCTTGGAAAGAATAGATAGAAAAGTCTCCAATATTGCTGAAACAGTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAAAGAATAGATAGAAAAGTCTCCAATATTGCTGAAACAGTTCTG  629

seq1  AGTAATGGCCAGGTCCTGCCTACAGTCCCACTTGTGGAACTTATGTCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGGCCAGGTCCTGCCTACAGTCCCACTTGTGGAACTTATGTCTAC  679

seq1  CACTTGAACATTGGAGAGTGAATTTCAGAATATATCTGTGCTGTTTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGAACATTGGAGAGTGAATTTCAGAATATATCTGTGCTGTTTGTTT  729

seq1  TGATTTCATATTGTATCTACCATGCCCCACTGGAACATGGAACAAACTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCATATTGTATCTACCATGCCCCACTGGAACATGGAACAAACTAA  779

seq1  TGAGTTTGATAGCCAAATTTAAGTCCTTTTTTTCAGCTCTGTCTTCTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGATAGCCAAATTTAAGTCCTTTTTTTCAGCTCTGTCTTCTGAG  829

seq1  GTTTTGTTTCCCTTCCCACAGTGGCACGAATAGGCATAAATATAGTGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTCCCTTCCCACAGTGGCACGAATAGGCATAAATATAGTGAGC  879

seq1  AGATCTTTATTTACAGCTCATAAATTATTTACCTAGATATTTAGGCATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTTATTTACAGCTCATAAATTATTTACCTAGATATTTAGGCATAT  929

seq1  GAGACTAACATATCTGCTATCTACTTGGTCTTTAAATTATTTTGCATTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTAACATATCTGCTATCTACTTGGTCTTTAAATTATTTTGCATTGA  979

seq1  AACGTGGGTATTGGTGCTTAAAAGCAAGCAGAGAAGTTAGAGATTAAAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGGGTATTGGTGCTTAAAAGCAAGCAGAGAAGTTAGAGATTAAAAT  1029

seq1  TTCAGAAAAACTCAGACACCTGGTCTGCTTTTCGGTGACCACTTACTGCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAAAACTCAGACACCTGGTCTGCTTTTCGGTGACCACTTACTGCT  1079

seq1  ACTTTTGAATTC  1112
      ||||||||||||
seq2  ACTTTTGAATTC  1091