BAC Information

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BAC

Clone NameB6Ng01-155L08
Chromosome2 (Build37)
Map Location 15,356,761 - 15,357,570
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc39a12, Cacnb2, LOC100041164, LOC625335, LOC625342, LOC100041220, Nsun6, Arl5b, LOC633061, LOC667329
Downstream geneLOC227588, LOC625457, Plxdc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155L08.bB6Ng01-155L08.g
ACCDH950416DH950417
length1,1031,085
definitionDH950416|Mus musculus domesticus DNA, BAC clone: B6Ng01-155L08, 5' end.DH950417|Mus musculus domesticus DNA, BAC clone: B6Ng01-155L08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccttcgcctaggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacgaggaaggcagagcacatggagtgaagaacca
ccctcggcacatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggcgcggctcccaacaatttttat
taggtattttcctcatttacatttccaatgctacccccaaagtcccccat
accctccaccccactcccctacccacccactcccactttttggccctggc
gttcccctgtcctggggcatataaagtttgcatgtccaatgggcctctct
ttccagtgatggccgactaggccatcttttgatacatatgcagctagagt
caagagctccggggtactggttagttcataatgttgatccacctataggg
ttgcagacccctttagctccttgggtactttctctagctcctccattggg
ggccctgtgatccatccaatagctgactatgatcatccacttctgtgttt
gctaggccccagcatagtctcacaagagacagctatatctgggtcctttc
agcaaaatcttgctagtgtatgcaatagtgtcagcgtttggaggctgatt
atgggatggatccctggaaatggcagtctctagatggtgcatccttttgt
ctcagctccaaactttgtctctgtaactccttccagcggtgttttgttcc
cagttctaagaaggggcaaagtgtccacactttggtcttcgttcttcttg
attcttaatagtttccagtgcctttttctttttttccttctatccccaaa
gctatttatgtagtatcatcatctaatatgacaactgaagggttaagcta
agtaccagtctttttttaatttcagctccatatatagctcaagttgaaaa
gaatctcacataagaatctattttatagttaattatttttgttatgtgtg
cacatacgcatgagatgtgtatgtcatggaagcagatagcatcacatctc
atgaactggtgttatgtggtgtgagtcacccacttcatatgctgggaatg
ctg
gaattcctgatctttctaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttatcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagcaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatcgtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatgatcaacttgatcctgattcaactt
tggtacctggtatctatccagaaatttgttcatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggattgttgttatgtctcccttttcatttctgattttgttaatt
aggattttgtccctgtgccctttagtgagtctagctaagggtttatctat
cttgttgattttctcaaagaaccaactccttgtttggttaattctttgaa
tagttcttcttgtttccacttgggtgatttcacccctgagtttgattatt
tctgccatctactcctcttgggtgaatttgcttccttttctagggctttt
agatgtgttgtcaagctgctagtatgtgctgtctcccgtttctctggaag
cactcagagctatgagtttcctcttagaaaagctttcatgtgtccatagg
ttgggtacgtgtggctccattcataacctcaaaagtttaattcttcctat
ttcctccttgacaggatactatgaaagaagtgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_15356761_15357570
seq2: B6Ng01-155L08.b_355_1152

seq1  CCTGTCCTGGGGCATATAAAGTTTGCATGTCCAATGGGCCTCTCTTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCTGGGGCATATAAAGTTTGCATGTCCAATGGGCCTCTCTTTCCA  50

seq1  GTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGA  100

seq1  GCTCCGGGGTACTGGTTAGTTCATAATGTTGATCCACCTATAGGGTTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCGGGGTACTGGTTAGTTCATAATGTTGATCCACCTATAGGGTTGCA  150

seq1  GACCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCC  200

seq1  TGTGATCCATCCAATAGCTGACTATGATCATCCACTTCTGTGTTTGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCCATCCAATAGCTGACTATGATCATCCACTTCTGTGTTTGCTAG  250

seq1  GCCCCAGCATAGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGCATAGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAA  300

seq1  AATCTTGCTAGTGTATGCAATAGTGTCAGCGTTTGGAGGCTGATTATGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGCTAGTGTATGCAATAGTGTCAGCGTTTGGAGGCTGATTATGGG  350

seq1  ATGGATCCCTGGAAATGGCAGTCTCTAGATGGTGCATCCTTTTGTCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCCCTGGAAATGGCAGTCTCTAGATGGTGCATCCTTTTGTCTCAG  400

seq1  CTCCAAACTTTGTCTCTGTAACTCCTTCCAGCGGTGTTTTGTTCCCAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAACTTTGTCTCTGTAACTCCTTCCAGCGGTGTTTTGTTCCCAGTT  450

seq1  CTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGATTCT  500

seq1  TAATAGTTTCCAGTGCCTTTTTCTTTTTTTCCTTCTATCCCCAAAGCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTTTCCAGTGCCTTTTTCTTTTTTTCCTTCTATCCCCAAAGCTAT  550

seq1  TTATGTAGTATCATCATCTAATATGACAACTGAAGGGTTAAGCTAAGTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAGTATCATCATCTAATATGACAACTGAAGGGTTAAGCTAAGTAC  600

seq1  CAGTCTTTTTTTAATTTCAGCTCCATATATAGCTCAAGTTGAAAAGAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTTTTTAATTTCAGCTCCATATATAGCTCAAGTTGAAAAGAATC  650

seq1  TCACATAAGAATCTTATTTTTAATAGTTAATTTATTTTTGTTTATGTGTG  700
      ||||||||||||| ||||||  |||||||| ||||||||| |||||||||
seq2  TCACATAAGAATC-TATTTT--ATAGTTAA-TTATTTTTG-TTATGTGTG  695

seq1  CACATACGCATGAGGATGTGTATGTCCATGGAGGCAGATAAGGCATCACA  750
      ||||||||||||| ||||||||||| |||||| |||||||  ||||||||
seq2  CACATACGCATGA-GATGTGTATGT-CATGGAAGCAGATA--GCATCACA  741

seq1  TCTCATGGAACTGGTGTTATGGTGGTTGTGAGTCACCCACTCCATATGCT  800
      |||||| ||||||||||||| |||| ||||||||||||||| ||||||||
seq2  TCTCAT-GAACTGGTGTTAT-GTGG-TGTGAGTCACCCACTTCATATGCT  788

seq1  GGGAATGCTG  810
      ||||||||||
seq2  GGGAATGCTG  798