BAC Information

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BAC

Clone NameB6Ng01-155L23
Chromosome2 (Build37)
Map Location 151,730,898 - 151,868,549
singlet/doubletdoublet
Overlap geneAngpt4, 5430432M24Rik, 2310046K01Rik, Scrt2
Upstream geneGins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390, 4930442J19Rik, LOC100043839, LOC100043840, 4921509C19Rik, Nsfl1c, Fkbp1a, Sdcbp2, Snph, LOC668929, BC052486, 5430405G05Rik, Psmf1, Rspo4
Downstream geneSrxn1, Tcf15, LOC100043843, Csnk2a1, Tbc1d20, Rbck1, Trib3, LOC628060, Nrsn2, Sox12, Zcchc3, 6820408C15Rik, EG629114, LOC668930, 9230107O10Rik, 9230002F21Rik, EG654457, OTTMUSG00000015852, Defb29, 4930525K10Rik, Defb19, OTTMUSG00000015859, Defb36, OTTMUSG00000015862, Rem1, H13, Mcts2, Id1, LOC629170, Cox4i2, Bcl2l1, Tpx2, Mylk2, Fkhl18, Dusp15, Ttll9, Pdrg1, Xkr7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155L23.bB6Ng01-155L23.g
ACCDH950444DH950445
length997458
definitionDH950444|Mus musculus domesticus DNA, BAC clone: B6Ng01-155L23, 5' end.DH950445|Mus musculus domesticus DNA, BAC clone: B6Ng01-155L23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,867,548 - 151,868,549)(151,730,898 - 151,731,361)
sequence
gaattcactctgtagaccaggctagccttgaagtcagagcctcccatgta
ctggagttaaaggtgtgctctgccaccacctggctgctagcctttcctat
tgttttgttactgatttttgagtaatttcataatgcggctcattttttcc
cagtttctcatgcgtcagacttgttaagcttttttactttttgagtttat
agtttacatcaggtttgaaatttttttagtcattccttttcaaatacttc
cctcttttggggactatggtcacatggtagcaggtttcttgagctgtctc
acagctccagaaatgcttgtctctctttgtgctgagttttggacaatctc
tgttctgactcactgtcttttctccttgtgtgtatttgatatgttttgat
tccatctttgtcattcccgcttaagggacttttttttttttttttttttt
ttggtttttcaagacagggtttctctgtatagccctggctgtcctggaac
taactcactttgtagaccaggctggcctcaaactcagaaatccgcccgcc
tctgcctcccgagtgctgggattaattaagggacttttaagactgccatt
tctctgatgtaaaacctctccttctatgccccaccccccacactgaacaa
ttgtatacacagtgttctgtcttcatgttcttatcaggctacttctgcat
cagttctgggtcagggtttttgtttgtttgtctgtttgcttgtttcctgg
attctccttttctgaacagaccacattttcttttttgtctggtaaacggc
aggtgcctgacactgtcaacttcacccttgctgggcacatacattttcaa
acatctatagatcttgcattctactctgagctacataagccactcagggc
actttgattctttctgctctgcttaccactgaaaagggccaccatactgc
tctactggaacagagcttctcctgtgtccacattgtttctgggtctt
tacctttgattgcacgttcagggtcaccggggctgaaggatgatagggtg
caaagagaggctggctccttctgacaccaacacagataacagtaagccac
ccggagttctcagatgctagcatttaagtggggctgcctcaccccgctct
gtggtgaccaacataccacccagagacggtgaggtgccttttaccctgtt
ccccagtaaggattaggtctcttccacttgaccttgactaccatgctgaa
ggcttaggtttgagggacttgaacactctgtgttccaccctccctaggat
atctgtcttggaaaccaaagggctgccatgccatgtatatcagagcccag
gccactcaaagacccaactgtcttggccaatagtcataactgaggctgca
catagtcagggaaaaggttgcttttattttctctctttctggtgtgtgtg
tgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_151867548_151868549
seq2: B6Ng01-155L23.b_46_1042 (reverse)

seq1  AAGA-CCAGAAACAGTGT-GACACAGGAGAAGCTCTGGTTCCCAGTAGAG  48
      |||| ||||||||| ||| ||||||||||||||||||  | |||||||||
seq2  AAGACCCAGAAACAATGTGGACACAGGAGAAGCTCTG--TTCCAGTAGAG  48

seq1  CAGTATGGTGGCCCTTTTCAGGTGGTAAAAGCAAGAGCAGAAAGAATCAA  98
      |||||||||||||||||||| |||||  |||| |||||||||||||||||
seq2  CAGTATGGTGGCCCTTTTCA-GTGGT--AAGC-AGAGCAGAAAGAATCAA  94

seq1  AGTGCCCCTGAGTGGCTTATTGTAGCTCAGAGTAGAATGCAAGATCTATA  148
      |||| |||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGTG-CCCTGAGTGGCTTA-TGTAGCTCAGAGTAGAATGCAAGATCTATA  142

seq1  GATGTTTGAAAATGTATGTGCCCAGCAAGGGTGAAGTTGACAGTGTCAGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTGAAAATGTATGTGCCCAGCAAGGGTGAAGTTGACAGTGTCAGG  192

seq1  CACCTGCCGTTTACCAGAC-AAAAAGGAAATGTGGTCTGTTCAGAAAAGG  247
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  CACCTGCCGTTTACCAGACAAAAAAGAAAATGTGGTCTGTTCAGAAAAGG  242

seq1  AGAATCCAGGAAACAAGCAAACAGACAAACAAACAAAAACCCTGACCCAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCAGGAAACAAGCAAACAGACAAACAAACAAAAACCCTGACCCAG  292

seq1  AACTGATGCAGAAGTAGCCTGATAAGAACATGAAGACAGAACACTGTGTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATGCAGAAGTAGCCTGATAAGAACATGAAGACAGAACACTGTGTA  342

seq1  TACAATTGTTCAGTGTGGGGGGTGGGGCATAGAAGGAGAGGTTTTACATC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTGTTCAGTGTGGGGGGTGGGGCATAGAAGGAGAGGTTTTACATC  392

seq1  AGAGAAATGGCAGTCTTAAAAGTCCCTTAATTAATCCCAGCACTCGGGAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATGGCAGTCTTAAAAGTCCCTTAATTAATCCCAGCACTCGGGAG  442

seq1  GCAGAGGCGGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCGGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTG  492

seq1  AGTTAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTTGAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTTGAAAA  542

seq1  ACCAAAAAAAAAAAAAAAAAAAAAAAGTCCCTTAAGCGGGAATGACAAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAAAAAAAAAAAAAAAAAAAAGTCCCTTAAGCGGGAATGACAAAG  592

seq1  ATGGAATCAAAACATATCAAATACACACAAGGAGAAAAGACAGTGAGTCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATCAAAACATATCAAATACACACAAGGAGAAAAGACAGTGAGTCA  642

seq1  GAACAGAGATTGTCCAAAACTCAGCACAAAGAGAGACAAGCATTTCTGGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAGATTGTCCAAAACTCAGCACAAAGAGAGACAAGCATTTCTGGA  692

seq1  GCTGTGAGACAGCTCAAGAAACCTGCTACCATGTGACCATAGTCCCCAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAGACAGCTCAAGAAACCTGCTACCATGTGACCATAGTCCCCAAA  742

seq1  AGAGGGAAGTATTTGAAAAGGAATGACTAAAAAAATTTCAAACCTGATGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAAGTATTTGAAAAGGAATGACTAAAAAAATTTCAAACCTGATGT  792

seq1  AAACTATAAACTCAAAAAGTAAAAAAGCTTAACAAGTCTGACGCATGAGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATAAACTCAAAAAGTAAAAAAGCTTAACAAGTCTGACGCATGAGA  842

seq1  AACTGGGAAAAAATGAGCCGCATTATGAAATTACTCAAAAATCAGTAACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGAAAAAATGAGCCGCATTATGAAATTACTCAAAAATCAGTAACA  892

seq1  AAACAATAGGAAAGGCTAGCAGCCAGGTGGTGGCAGAGCACACCTTTAAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATAGGAAAGGCTAGCAGCCAGGTGGTGGCAGAGCACACCTTTAAC  942

seq1  TCCAGTACATGGGAGGCTCTGACTTCAAGGCTAGCCTGGTCTACAGAGTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTACATGGGAGGCTCTGACTTCAAGGCTAGCCTGGTCTACAGAGTG  992

seq1  AATTC  1002
      |||||
seq2  AATTC  997

seq1: chr2_151730898_151731361
seq2: B6Ng01-155L23.g_67_530

seq1  GAATTCTACCTTTGATTGCACGTTCAGGGTCACCGGGGCTGAAGGATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCTTTGATTGCACGTTCAGGGTCACCGGGGCTGAAGGATGAT  50

seq1  AGGGTGCAAAGAGAGGCTGGCTCCTTCTGACACCAACACAGATAACAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGCAAAGAGAGGCTGGCTCCTTCTGACACCAACACAGATAACAGTA  100

seq1  AGCCACCCGGAGTTCTCAGATGCTAGCATTTAAGTGGGGCTGCCTCACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCCGGAGTTCTCAGATGCTAGCATTTAAGTGGGGCTGCCTCACCC  150

seq1  CGCTCTGTGGTGACCAACATACCACCCAGAGACGGTGAGGTGCCTTTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCTGTGGTGACCAACATACCACCCAGAGACGGTGAGGTGCCTTTTAC  200

seq1  CCTGTTCCCCAGTAAGGATTAGGTCTCTTCCACTTGACCTTGACTACCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCCCCAGTAAGGATTAGGTCTCTTCCACTTGACCTTGACTACCAT  250

seq1  GCTGAAGGCTTAGGTTTGAGGGACTTGAACACTCTGTGTTCCACCCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGGCTTAGGTTTGAGGGACTTGAACACTCTGTGTTCCACCCTCCC  300

seq1  TAGGATATCTGTCTTGGAAACCAAAGGGCTGCCATGCCATGTATATCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATATCTGTCTTGGAAACCAAAGGGCTGCCATGCCATGTATATCAGA  350

seq1  GCCCAGGCCACTCAAAGACCCAACTGTCTTGGCCAATAGTCATAACTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGCCACTCAAAGACCCAACTGTCTTGGCCAATAGTCATAACTGAG  400

seq1  GCTGCACATAGTCAGGGAAAAGGTTGCTTTTATTTTCTCTCTTTCTGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCACATAGTCAGGGAAAAGGTTGCTTTTATTTTCTCTCTTTCTGGTG  450

seq1  TGTGTGTGTGTGTG  464
      ||||||||||||||
seq2  TGTGTGTGTGTGTG  464